Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03357 ATGGATGACGTACCGTATCCCGCGTGTATCCTGCACCGATACATGCTCGATATGTATCAGGAGAGCTCAGTATCTAACCACATAGCCATAAACAGCAACAAAACAAACAACAATGATAATGATGGTGATGTTGTGTATGGTTTCTACGATTGTCGTGGTGATATAATAGGAAGTTTCTGTCAATTTTGTATCAACGCTGCTGTTAGAGATATCGCTCTACGTTGTCCCAATGGTGTCTCGGCTATGATATGGTATGACATATGCGTCATCGGTTATTCTGACCACAATACGTCAGGAAAAATTTCTGTAACCCCATCATGGAATTTAACCGGAACCAAAACCGCTAAGAACTCAACTGAACTTGACAAAGAAGTAAATGACATGAGGAATTTGATAGGAAAAGTGACCGCAGAAGCCAATTCCAATTGGGCAGTGGGAGAGTTCAATTGGAGTGACACTGAGAAACGGTATGGTTGGGTGCAGTGTAATAGTGACCTTACTAAAGACGGGTGCAGATATTGTTTGGAAACTATGTTGGATAAAGTTCCTCAATGCTGTGGAACAAAGGTAAAATGGGCAGTGGTGTCTCCTAGTTGTGGAATGGAGATTGATGATAACAAGTTCTACAACTTCCAAACAGAATCGCCTCCTTCGTTGCCAAATCCAGGCAAGCAGGACGGGGCGAGTAATACCAAAACCTTGATCATCATCTTAGTATGTGTACTGGTGGCAGTAGCTCTACTAAGTTGTTCTGTCTACTACTACTGGAAAAAGAATAGGCTAAGTAAAGGGGGTTTGCTGTTAAGGACCATTACTCCTAAATCTTTCCGTGATCATGTTCAAAAAGAGGATTCATTTAATGGGGACCTTCCTACAATCCCTTTAACTGTAATTCAACAAAGCACTGATAACTTTTCACAGTCATTTAAATTAGGAGAAGGTGGATTTGGCCCAGTTTACAAGGGTACTTTACCAGATGGGACCGAAATTGCAGCCAAAAGGCTTTCAGAAACATCAGGTCAAGGTTTAGAGGAGTTTAAGAATGAAGTAATTTTCATAGCTAAACTACAACATAGAAACCTTGTGAAACTCTTGGGTTGCTGCTTTGAAGAAAATGAAAAGATACTGGTATATGAGTATATGCCAAATTCAAGCCTTAACTTTCACGTTTTCAATGAAGAAAAACATAAGCATCTAGATTGGAAACTACGACTAAGCATTATCAAAGGAATCGCAAGAGGACTTCTATACCTTCATGAGGATTCTCCACTTAGAGTAATCCACAGAGATATGAAAGCGAGCAATGTTCTTCTGGATGATGCAATGAATCCAAAAATATCAGATTTTGGATTAGCAAGGACATTTGAAAAAGATCAATGTCATACAAAAACAAAAAGAGTTATTGGCACCTATGGATACATGGCTCCAGAATACGCTATGGCTGGGTTATTTTCCGTGAAATCCGATGTTTTCAGCTTTGGAGTTCTTGTGTTAGAAATAATTTATGGAAAAAGAAATGGCGACTTCTTTCTGTCAGAACATATGCAAAGTCTTCTATTATATACTTGGAAACTCTGGTGTGAAGGAAAAAGTCTAGAATTAATCGATCCATTCCACCAAAAGACATACATTGAAAGTGAAGTCTTGAAGTGTATACATATTGGTTTATTGTGCGTACAAGAAGATGCAGCAGATCGACCAACCATGTCCACCGTTGTTGGCATGCTAGGGAGTGACACAGTAGACCTTCCAAAACCCACACAACCAGCATTTTCAGTTGGTAGAAAACCCAAGAATGAAGATCAAAGTTCAAAAAATTATAAGGATAATTCTGTTGATGAAGAAACCATAACTATTGTTTCACCTAGATAG 1872 0.3905 MDDVPYPACILHRYMLDMYQESSVSNHIAINSNKTNNNDNDGDVVYGFYDCRGDIIGSFCQFCINAAVRDIALRCPNGVSAMIWYDICVIGYSDHNTSGKISVTPSWNLTGTKTAKNSTELDKEVNDMRNLIGKVTAEANSNWAVGEFNWSDTEKRYGWVQCNSDLTKDGCRYCLETMLDKVPQCCGTKVKWAVVSPSCGMEIDDNKFYNFQTESPPSLPNPGKQDGASNTKTLIIILVCVLVAVALLSCSVYYYWKKNRLSKGGLLLRTITPKSFRDHVQKEDSFNGDLPTIPLTVIQQSTDNFSQSFKLGEGGFGPVYKGTLPDGTEIAAKRLSETSGQGLEEFKNEVIFIAKLQHRNLVKLLGCCFEENEKILVYEYMPNSSLNFHVFNEEKHKHLDWKLRLSIIKGIARGLLYLHEDSPLRVIHRDMKASNVLLDDAMNPKISDFGLARTFEKDQCHTKTKRVIGTYGYMAPEYAMAGLFSVKSDVFSFGVLVLEIIYGKRNGDFFLSEHMQSLLLYTWKLWCEGKSLELIDPFHQKTYIESEVLKCIHIGLLCVQEDAADRPTMSTVVGMLGSDTVDLPKPTQPAFSVGRKPKNEDQSSKNYKDNSVDEETITIVSPR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03357 623 Gene3D Transferase(Phosphotransferase) domain 1 381 583 - -
Mepo1g03357 623 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 96 622 - -
Mepo1g03357 623 ProSiteProfiles Gnk2-homologous domain profile. 103 208 IPR002902 -
Mepo1g03357 623 Gene3D - 105 208 IPR038408 -
Mepo1g03357 623 Gene3D - 10 96 IPR038408 -
Mepo1g03357 623 ProSiteProfiles Protein kinase domain profile. 305 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03357 623 Gene3D Phosphorylase Kinase; domain 1 269 380 - -
Mepo1g03357 623 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 270 380 - -
Mepo1g03357 623 FunFam Liguleless narrow1 381 584 - -
Mepo1g03357 623 ProSiteProfiles Gnk2-homologous domain profile. 1 97 IPR002902 -
Mepo1g03357 623 MobiDBLite consensus disorder prediction 598 612 - -
Mepo1g03357 623 SUPERFAMILY Protein kinase-like (PK-like) 288 576 IPR011009 -
Mepo1g03357 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Mepo1g03357 623 Pfam Protein tyrosine and serine/threonine kinase 310 575 IPR001245 GO:0004672|GO:0006468
Mepo1g03357 623 MobiDBLite consensus disorder prediction 580 623 - -
Mepo1g03357 623 CDD STKc_IRAK 311 576 - -
Mepo1g03357 623 Pfam Domain of unknown function (DUF3403) 578 623 IPR021820 GO:0004674
Mepo1g03357 623 SMART serkin_6 305 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03357 623 Pfam Salt stress response/antifungal 126 203 IPR002902 -
Mepo1g03357 623 Pfam Salt stress response/antifungal 34 94 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03357 Mepo-Chr1 38649297 38665829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03357 33 623 Receptor kinase-like Gene Family AT4G05200 40.711 3.22e-159 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g03357 PK_Tyr_Ser-Thr 7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03357 - - mtr:11406796 1132.86