Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03346 ATGATGAGGCGGATGAAAAAGGAGATTGAGGATGAGATGCTCGACGATGATCAGATTGGGTCAGAGTTTAATGATGAGGGGTATAACAGAAGTACCCGTGGAGTTGTTCTAAAGAAAGGGCCATGGACATCTGTTGAAGATGATATTTTGGTCAATTATGTCAAGAAGAACGGAGAGGGGAACTGGAATGCTGTTCAGAAGCAGACAGGCCTGCTACGTTGCGGAAAAAGTTGTCGATTGCGCTGGGCTAATCACCTTAGACCAAATTTAAAGAAAGGGACATTTACTGCAGAAGAGGAGCAGTTGATTTGCGAGCTTCATGCAAAAATAGGAAATAAATGGGCACGCATGGCAGCGCATTTACCTGGTCGTACAGATAACGAGATAAAGAACTATTGGAACACTCGGATCAAGAGGCGTCACCGGGCTGGCTTGCCACTTTATCCTCCTGAAGTATTGCAACAGACTCTTCATGGCCAAAGCACCGATGGAATTAACAGCGGCAATAAAGTGCATCCCGATTTCTTGCAGAAAAAGAATTTTGATATACATGATGCAATATATGACTGTATGAAGGATAACCAGGGAATGTTACCTTATGTTGCTGAGCTTCCTGATATTTCTGCTTATAGCAATATGCTAAATGGTTTTGATTCTTCTCAGTATTGTAGTTTTGGGCAATCAACATCATCTAACCACAAACGTTTTCGAGATTCAACAATTCCATACTTTGATTTCAGTTGTATCGACAGAAATGGTTATTATCCATTTGATCATATTCAGGATGATACTTTTTATAAGTGGACACAATCATTTGGCATGCAATCACCCCTTCATCATGCTGGTCCCTCCTCTCACAGCTCAATGTGTTACAGCCATTCACTAAAAAATGGAAATTCCTCCACTTCTAAGCCTTTCGAGGAGCTTCCTTCAATCCAATATCCAGAAACTGATTTAGGTAGCTGGGGCACATCTCCCCCACCTCCTTTACTTGAGTCAGTTGATGATTTCATTAAGTCTCCTACACCAATTAGTACACTGGAGTCAGATTGTTCTTCTCCACAGAATAGTGGCCTGCTACAATCTGTACTTTATCCGCGGAAGACTCCAAGCAGTTCAAAAAACCAATTTTATGGCAAGAGTTCAAATTCATCTACTGCAACTCCTGGTGAAAGAGCAGACAGCTCTGCTTTGAACATGTATGAGACAGAATGGGAAGAATCTGCTGACCCTGTATCTCCATTTGGCACATCTTCAATATTGAACGAGTGCCCTGCTGTTAGTGCCAACAAAAGTTCACTGGATGAGCAGCCACCAGTTCATACCGTTAATGGCAACACTGTGAAACTAGAGTATGTTGACCCGGTTTGGACCCCTGACAGTGGAAATCAAATCACGTCTCTGTTGAACTTTAGTCGGCCAGATTTCTTGCTTGGTTCAGATTGGTATGAGCAATGTTCTGGGAATGACCAGAACCAATCCATCTTCTATGATGCTACATCGATGTTTCTCGAAGATCAATCAGCCACCGACTATAAACACATGACTGCTGCAACTTCTAACCCAAGTCAGGTAAGGGAGTTTGGTTCTTGTGCATGGAACAACATGCCTGCTGTCTGTCAAGTATCTGATCTTGGTTAA 1641 0.4247 MMRRMKKEIEDEMLDDDQIGSEFNDEGYNRSTRGVVLKKGPWTSVEDDILVNYVKKNGEGNWNAVQKQTGLLRCGKSCRLRWANHLRPNLKKGTFTAEEEQLICELHAKIGNKWARMAAHLPGRTDNEIKNYWNTRIKRRHRAGLPLYPPEVLQQTLHGQSTDGINSGNKVHPDFLQKKNFDIHDAIYDCMKDNQGMLPYVAELPDISAYSNMLNGFDSSQYCSFGQSTSSNHKRFRDSTIPYFDFSCIDRNGYYPFDHIQDDTFYKWTQSFGMQSPLHHAGPSSHSSMCYSHSLKNGNSSTSKPFEELPSIQYPETDLGSWGTSPPPPLLESVDDFIKSPTPISTLESDCSSPQNSGLLQSVLYPRKTPSSSKNQFYGKSSNSSTATPGERADSSALNMYETEWEESADPVSPFGTSSILNECPAVSANKSSLDEQPPVHTVNGNTVKLEYVDPVWTPDSGNQITSLLNFSRPDFLLGSDWYEQCSGNDQNQSIFYDATSMFLEDQSATDYKHMTAATSNPSQVREFGSCAWNNMPAVCQVSDLG 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03346 546 Gene3D - 38 91 - -
Mepo1g03346 546 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 5 511 - -
Mepo1g03346 546 ProSiteProfiles Myb-like domain profile. 37 86 IPR001005 -
Mepo1g03346 546 MobiDBLite consensus disorder prediction 370 393 - -
Mepo1g03346 546 Pfam Myb-like DNA-binding domain 39 86 IPR001005 -
Mepo1g03346 546 Pfam Myb-like DNA-binding domain 92 135 IPR001005 -
Mepo1g03346 546 MobiDBLite consensus disorder prediction 370 395 - -
Mepo1g03346 546 ProSiteProfiles Myb-like domain profile. 87 137 IPR001005 -
Mepo1g03346 546 SMART sant 38 88 IPR001005 -
Mepo1g03346 546 SMART sant 91 139 IPR001005 -
Mepo1g03346 546 FunFam Transcription factor GAMYB 94 140 - -
Mepo1g03346 546 Gene3D - 94 140 - -
Mepo1g03346 546 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 86 IPR017930 -
Mepo1g03346 546 FunFam MYB-related transcription factor 38 91 - -
Mepo1g03346 546 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 141 IPR017930 -
Mepo1g03346 546 MobiDBLite consensus disorder prediction 318 337 - -
Mepo1g03346 546 CDD SANT 41 86 IPR001005 -
Mepo1g03346 546 SUPERFAMILY Homeodomain-like 38 133 IPR009057 -
Mepo1g03346 546 CDD SANT 94 135 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03346 Mepo-Chr1 38544007 38546955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03346 36 539 MYB Transcription Factor Family AT3G11440 41.651 2.75e-107 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo1g03346 Myb_DNA-binding 2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03346 K09422 - gmx:100810415 741.11