Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g03346 | ATGATGAGGCGGATGAAAAAGGAGATTGAGGATGAGATGCTCGACGATGATCAGATTGGGTCAGAGTTTAATGATGAGGGGTATAACAGAAGTACCCGTGGAGTTGTTCTAAAGAAAGGGCCATGGACATCTGTTGAAGATGATATTTTGGTCAATTATGTCAAGAAGAACGGAGAGGGGAACTGGAATGCTGTTCAGAAGCAGACAGGCCTGCTACGTTGCGGAAAAAGTTGTCGATTGCGCTGGGCTAATCACCTTAGACCAAATTTAAAGAAAGGGACATTTACTGCAGAAGAGGAGCAGTTGATTTGCGAGCTTCATGCAAAAATAGGAAATAAATGGGCACGCATGGCAGCGCATTTACCTGGTCGTACAGATAACGAGATAAAGAACTATTGGAACACTCGGATCAAGAGGCGTCACCGGGCTGGCTTGCCACTTTATCCTCCTGAAGTATTGCAACAGACTCTTCATGGCCAAAGCACCGATGGAATTAACAGCGGCAATAAAGTGCATCCCGATTTCTTGCAGAAAAAGAATTTTGATATACATGATGCAATATATGACTGTATGAAGGATAACCAGGGAATGTTACCTTATGTTGCTGAGCTTCCTGATATTTCTGCTTATAGCAATATGCTAAATGGTTTTGATTCTTCTCAGTATTGTAGTTTTGGGCAATCAACATCATCTAACCACAAACGTTTTCGAGATTCAACAATTCCATACTTTGATTTCAGTTGTATCGACAGAAATGGTTATTATCCATTTGATCATATTCAGGATGATACTTTTTATAAGTGGACACAATCATTTGGCATGCAATCACCCCTTCATCATGCTGGTCCCTCCTCTCACAGCTCAATGTGTTACAGCCATTCACTAAAAAATGGAAATTCCTCCACTTCTAAGCCTTTCGAGGAGCTTCCTTCAATCCAATATCCAGAAACTGATTTAGGTAGCTGGGGCACATCTCCCCCACCTCCTTTACTTGAGTCAGTTGATGATTTCATTAAGTCTCCTACACCAATTAGTACACTGGAGTCAGATTGTTCTTCTCCACAGAATAGTGGCCTGCTACAATCTGTACTTTATCCGCGGAAGACTCCAAGCAGTTCAAAAAACCAATTTTATGGCAAGAGTTCAAATTCATCTACTGCAACTCCTGGTGAAAGAGCAGACAGCTCTGCTTTGAACATGTATGAGACAGAATGGGAAGAATCTGCTGACCCTGTATCTCCATTTGGCACATCTTCAATATTGAACGAGTGCCCTGCTGTTAGTGCCAACAAAAGTTCACTGGATGAGCAGCCACCAGTTCATACCGTTAATGGCAACACTGTGAAACTAGAGTATGTTGACCCGGTTTGGACCCCTGACAGTGGAAATCAAATCACGTCTCTGTTGAACTTTAGTCGGCCAGATTTCTTGCTTGGTTCAGATTGGTATGAGCAATGTTCTGGGAATGACCAGAACCAATCCATCTTCTATGATGCTACATCGATGTTTCTCGAAGATCAATCAGCCACCGACTATAAACACATGACTGCTGCAACTTCTAACCCAAGTCAGGTAAGGGAGTTTGGTTCTTGTGCATGGAACAACATGCCTGCTGTCTGTCAAGTATCTGATCTTGGTTAA | 1641 | 0.4247 | MMRRMKKEIEDEMLDDDQIGSEFNDEGYNRSTRGVVLKKGPWTSVEDDILVNYVKKNGEGNWNAVQKQTGLLRCGKSCRLRWANHLRPNLKKGTFTAEEEQLICELHAKIGNKWARMAAHLPGRTDNEIKNYWNTRIKRRHRAGLPLYPPEVLQQTLHGQSTDGINSGNKVHPDFLQKKNFDIHDAIYDCMKDNQGMLPYVAELPDISAYSNMLNGFDSSQYCSFGQSTSSNHKRFRDSTIPYFDFSCIDRNGYYPFDHIQDDTFYKWTQSFGMQSPLHHAGPSSHSSMCYSHSLKNGNSSTSKPFEELPSIQYPETDLGSWGTSPPPPLLESVDDFIKSPTPISTLESDCSSPQNSGLLQSVLYPRKTPSSSKNQFYGKSSNSSTATPGERADSSALNMYETEWEESADPVSPFGTSSILNECPAVSANKSSLDEQPPVHTVNGNTVKLEYVDPVWTPDSGNQITSLLNFSRPDFLLGSDWYEQCSGNDQNQSIFYDATSMFLEDQSATDYKHMTAATSNPSQVREFGSCAWNNMPAVCQVSDLG | 546 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g03346 | 546 | Gene3D | - | 38 | 91 | - | - | |
Mepo1g03346 | 546 | PANTHER | TRANSCRIPTION FACTOR MYB33-RELATED | 5 | 511 | - | - | |
Mepo1g03346 | 546 | ProSiteProfiles | Myb-like domain profile. | 37 | 86 | IPR001005 | - | |
Mepo1g03346 | 546 | MobiDBLite | consensus disorder prediction | 370 | 393 | - | - | |
Mepo1g03346 | 546 | Pfam | Myb-like DNA-binding domain | 39 | 86 | IPR001005 | - | |
Mepo1g03346 | 546 | Pfam | Myb-like DNA-binding domain | 92 | 135 | IPR001005 | - | |
Mepo1g03346 | 546 | MobiDBLite | consensus disorder prediction | 370 | 395 | - | - | |
Mepo1g03346 | 546 | ProSiteProfiles | Myb-like domain profile. | 87 | 137 | IPR001005 | - | |
Mepo1g03346 | 546 | SMART | sant | 38 | 88 | IPR001005 | - | |
Mepo1g03346 | 546 | SMART | sant | 91 | 139 | IPR001005 | - | |
Mepo1g03346 | 546 | FunFam | Transcription factor GAMYB | 94 | 140 | - | - | |
Mepo1g03346 | 546 | Gene3D | - | 94 | 140 | - | - | |
Mepo1g03346 | 546 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 34 | 86 | IPR017930 | - | |
Mepo1g03346 | 546 | FunFam | MYB-related transcription factor | 38 | 91 | - | - | |
Mepo1g03346 | 546 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 87 | 141 | IPR017930 | - | |
Mepo1g03346 | 546 | MobiDBLite | consensus disorder prediction | 318 | 337 | - | - | |
Mepo1g03346 | 546 | CDD | SANT | 41 | 86 | IPR001005 | - | |
Mepo1g03346 | 546 | SUPERFAMILY | Homeodomain-like | 38 | 133 | IPR009057 | - | |
Mepo1g03346 | 546 | CDD | SANT | 94 | 135 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g03346 | Mepo-Chr1 | 38544007 | 38546955 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g03346 | 36 | 539 | MYB Transcription Factor Family | AT3G11440 | 41.651 | 2.75e-107 | 330 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Mepo1g03346 | Myb_DNA-binding | 2e-12 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g03346 | K09422 | - | gmx:100810415 | 741.11 |