Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03343 ATGCTTCGTAGAGGACAGGTTGGATATCTCAAATCTGAAAGGAACCTTCTTGCAGAAGTTGATAGCAATTGCATTGTAAAAATTTATTGTTCCTTTCAAGATGACGAGTATTTATATCTCATAATGGAGTGTCTACCCGGTGGAGATATGATGACGTTGCTGATGCCGAAAGAAGTACTGACTGAAGATGAAGCTAAGTTGTATATCGGGGAGACTGTGCTATCCATAGAGTCTATTCGTAAACATAATTTATTACTATCTATTCATCCCAAGATTCTTAAGCTGTGCTCATTGGGTTCTTCAGCTTGCTTGGATTCTGTAGACGCATGTCTCCTTCTACTAACATGCTCTTTCTTGCACCAGGTGTTAGATACCCGTGGACATTTGTTGGTTGCCTTGGGGTATGGTTTATGGCTGTCGATGGTTCTTATATCAGAAATTGTCCAGACATTCATCTTAGCAGATTTCTGTTACTATTATGTCAAGAGGTTAACATAG 498 0.3936 MLRRGQVGYLKSERNLLAEVDSNCIVKIYCSFQDDEYLYLIMECLPGGDMMTLLMPKEVLTEDEAKLYIGETVLSIESIRKHNLLLSIHPKILKLCSLGSSACLDSVDACLLLLTCSFLHQVLDTRGHLLVALGYGLWLSMVLISEIVQTFILADFCYYYVKRLT 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03343 165 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Mepo1g03343 165 ProSiteProfiles Protein kinase domain profile. 1 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03343 165 Pfam Protein kinase domain 11 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03343 165 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 84 - -
Mepo1g03343 165 SMART serkin_6 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03343 165 SUPERFAMILY Protein kinase-like (PK-like) 5 109 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03343 Mepo-Chr1 38525315 38526327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03343 1 85 AGC Kinase Gene Family AT4G14350 81.176 2.50e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Mepo1g03343 Pkinase 1.6e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03343 K08790 - cit:102627318 146.362