Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03340 ATGCACCTACAGGTTATTGCAGGAGCATCCGATTGGTTTGGTCCTGGAAGCAGGATCATAATTACAACACGGGACAAGCATTTGTTAAAAGCGCATGCAGTTAATATAATATATGAGGTACATGAATTAAGTGAAGGAGAATCTCTTGATTTGCTTTGTTGGAGTGCTTTCAAAACAAACAAAGTTGATCCAAGATATGCAGACATTTTGAAACGTGAATTGGCTTTTTCCTCTGGGCTTCCATTAGCTTTGAAAGTATTAGGCTGCTACTTGTTTGGCAAAAGCATAAATGAATCTGAAAGTGCATTGGATTGGTGGTATGAAAGAATTCCACACAACCATATCCTAACAGCACTCAAGATAAGCTTTGATTCCTTGGACGAAGAAGAAAAGGATATTTTCCTTGATATTGCTTGTTTCTTCAATGGACGTAAACTGGAAGACGTGGAAGACATACTGGGGGCTCATTATGGTGGATCTATGAAAGATATTATTAACACATTGATAGAAAAATCTCTCATAAAGATTGACAATGGTCTTGTGACATTGCATTACCTGATTGAAGACATGGGTAAAGAAATTGTCCGACAAGAATCACCACATGAGCCAAGCGAACGTAGTAGGTTATGGCGTTTCGATGATGTAGTTCACGTTTTAGAAGAAAATTCGGTGTCTAGTAAAATTGAAAGCTTATTTCTGGATTTCCCCAAAGATGACGGTAAAGAAGTATGTTGGGATGGAAATGCTTTAAAGAAGATGCGAAACCTCAAAACACTTGTTGTTAGAAATGTCCGTTTTAACAGAGGCCCCACACATCTTCCCAATAGTTTAAGAGTGTTGGAATGGTGGGGATATCCTTCACCGTCATTACCAGATGATTTTCATCCAAAGAAACTTGGCATACTCAAGTTACCTGAAAATTACCTAAGGACAAGTGAACCAATTCAGGGAGTCATAAATTTGACAGTTCTGGATTTCAGCCACAGTAATTCGATAACTCATATACCTGATGTATCTGGCCTCCCAAATTTAGAAAAAATTTCTTTTAAATGTTGTGAGAATTTAATTCAAATTCATGACTCAGTTGGATATTTGGGAAATCTTAAGACATTGGATGCTGCTGGTTGCAATAACCTCAAGACTTTTCCGCCAATCAGATTAATCTCGCTTGAACAACTTAATCTTTCACACTGCTCAATTCTGGAGAGTTTCCCAGAAATATTGGGAAAGATGGGAAATGTAACAGAGCTTTGTATAGTGGGAAGTCCTATAAAAGAATTGCCATTTTCAATTATAAACCTTAACCGGCTTCGGAAATTAAAACTACACAACTGTGGAATTGTTCAGATACCAAATAGCATTGTCATGCTGCCTGAACTTTGTTTGATGAGTGTTTCAAGATGTGAAGTGTTGTGGTTATCTAAACCGGGCAAAGGTGAAGAATCGGAGACCTTGTCTTCAAATACAGAACATCTTACTCTGTCATACTGCAATATATCAGATGACTTCTTTCCAAAAGGTCTTACTTGGTTTGCCAATGTGAAAGATTTGGACCTTTCGGGGAATAATTTTACAATTGTTCACGCATGCCTCAAAGAGTGTCACTTTCTGAGGAGCCTTAATCTGGATGATTGCAGGCTTATACGAGAAATTGTTGGGATACCACAGAAATTAGAAACATTTTCTGCAAAGGAATGCGTATCCTTGAAATACTTGGACCTGGCAGCAGAAAGTCACTCTTTGAGAGAACTTATTCTAGATGATTGTGTGAATCTTCGAGAGATTATAGGGGATCTTCCAAACTTGAATCATTTCTCTGCAAAAAACTGCACATCATTGACTTCCTGGTGTAAAAGCATGTTAATGAATCAGGAATCTGTAGAAGCTGGAAACAAGATGTTTTCTTTGCCTGGAAAAAAGATACCGGATTGGTTTGCACTCCATAGAACGGGAGAGTCAATAGCTTTCTATTTTCGCAACAAATTCCCTGCAATATCTGTGTGTCTTGTTATTGGGCATGTGGATGAGAAACCTATCTCGGTCAAGTTTAGCCCTGAAGTGTTTGTCAATGGCAATAAACTGTCCTTTGTCAATCAGTTAGTCTACAATTTCAGGATAGCAACGGATCATATACTTTTGTTTGATGTGCGGCTGTTAAAATTTGAAGATAATGGGAATGCATTGTTTTCAGACAATGATTGGAATCATGTGGTGATTTCATATGTGGATCATATCACTGACAGTGAAGTTCCAATAAGAGTGGTTGCCAAATACAGTGGGATCCATGTACTTAACCAAACAAGTGGATTGGAAGATATCCGATTAACCATTCCCCAGAAAACATTGATAAATGCGAATTTGGATCCTACAAATTCAATGATGGGACAACCTCAGAAAATTATGACAAAGAGACCCCAGGAAGACCAGACGATGGTGCTGTCACCCCCACTCGCAACAATACAATCTCCATCTTCAACTGATGAAGTCGTAAAAGGCCTTGCCCCTCAACCCACTCGTAAAAGGCCTTTGGCAGATTTGGGAGGAGAAATTTCAGAGAATCTTTCAGAAGATGAAGTTTATGTTGCTACAATTCAGAAGGACCCTCCAGTCATTCAACAATACAGTGAGGGTGATGACGTTGAGTTGGAATCCTTATCCCGTGAAGAAAAGTCTTCTTCCTACAGCGAAGGTTCTGACTCAGATGATCCCTTCGACTTGGTTAATATAAAACTGTCTGACATTGGCATGGAAACCATATCTTCTGGGGAAAGATCTGGAGATGCATCTATGAGATCAATTAGAGAGGCTATTAATGGCTTGGAGCTGTTGATAGTTAATGACTTATCCGAAGTCTCTTCTGATCCTACCAAACTGTCCGAACTTCATCAGTTGTTGGATCTACTGAGTACAAGTAGCCACCCCAAGGTGACTGTAGAGGTGAAGGAGGCTATTGTAGAGTTCAAGAAAAATGTCTTTTTATCATTCCAAGAATTTCAATCTGCTGCTGAGTCTGTCAACAAACTGAAGAATTTTGAAAGGCAGCTGGCCGTAATTCAGCAGAAGACTATAGCAGGCAAGGGTCAAAGAACGGACCTCAAAAACACAATAAAAAAGGTTTCTTTGGCCATGAAAGCTGGAAATAGTAGGAAGAAGGAGCTAGAGACAGAGAATGCAACTTTAAGGAAACAGCTAGATACCAATGAAAGGGAACTTGAACAAGTTGTACTGAATCTCAAGAATCAGGAGGAAACACTCTCAACCTATTCAACGAGTTATGCTTCTCTCAACGAGCAAGCTGGAGCACTATTAAAACAAACCGATGATCTACTTGCAGCAAGCAGTGGGATCAAGCAAGATGGTGAAGCGGCTGAATTAAAGCAAAGTAGGATCAAGTTGACCTGGTCTATTGACCTAACTAGCCAGCTTAACAAAATGAAAAAAACCATTCTTGGCTTTTTTGAGTAA 3465 0.3919 MHLQVIAGASDWFGPGSRIIITTRDKHLLKAHAVNIIYEVHELSEGESLDLLCWSAFKTNKVDPRYADILKRELAFSSGLPLALKVLGCYLFGKSINESESALDWWYERIPHNHILTALKISFDSLDEEEKDIFLDIACFFNGRKLEDVEDILGAHYGGSMKDIINTLIEKSLIKIDNGLVTLHYLIEDMGKEIVRQESPHEPSERSRLWRFDDVVHVLEENSVSSKIESLFLDFPKDDGKEVCWDGNALKKMRNLKTLVVRNVRFNRGPTHLPNSLRVLEWWGYPSPSLPDDFHPKKLGILKLPENYLRTSEPIQGVINLTVLDFSHSNSITHIPDVSGLPNLEKISFKCCENLIQIHDSVGYLGNLKTLDAAGCNNLKTFPPIRLISLEQLNLSHCSILESFPEILGKMGNVTELCIVGSPIKELPFSIINLNRLRKLKLHNCGIVQIPNSIVMLPELCLMSVSRCEVLWLSKPGKGEESETLSSNTEHLTLSYCNISDDFFPKGLTWFANVKDLDLSGNNFTIVHACLKECHFLRSLNLDDCRLIREIVGIPQKLETFSAKECVSLKYLDLAAESHSLRELILDDCVNLREIIGDLPNLNHFSAKNCTSLTSWCKSMLMNQESVEAGNKMFSLPGKKIPDWFALHRTGESIAFYFRNKFPAISVCLVIGHVDEKPISVKFSPEVFVNGNKLSFVNQLVYNFRIATDHILLFDVRLLKFEDNGNALFSDNDWNHVVISYVDHITDSEVPIRVVAKYSGIHVLNQTSGLEDIRLTIPQKTLINANLDPTNSMMGQPQKIMTKRPQEDQTMVLSPPLATIQSPSSTDEVVKGLAPQPTRKRPLADLGGEISENLSEDEVYVATIQKDPPVIQQYSEGDDVELESLSREEKSSSYSEGSDSDDPFDLVNIKLSDIGMETISSGERSGDASMRSIREAINGLELLIVNDLSEVSSDPTKLSELHQLLDLLSTSSHPKVTVEVKEAIVEFKKNVFLSFQEFQSAAESVNKLKNFERQLAVIQQKTIAGKGQRTDLKNTIKKVSLAMKAGNSRKKELETENATLRKQLDTNERELEQVVLNLKNQEETLSTYSTSYASLNEQAGALLKQTDDLLAASSGIKQDGEAAELKQSRIKLTWSIDLTSQLNKMKKTILGFFE 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03340 1154 ProSiteProfiles Leucine-rich repeat profile. 320 342 IPR001611 GO:0005515
Mepo1g03340 1154 Coils Coil 1043 1098 - -
Mepo1g03340 1154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 137 IPR027417 -
Mepo1g03340 1154 Gene3D - 42 127 IPR042197 -
Mepo1g03340 1154 MobiDBLite consensus disorder prediction 818 845 - -
Mepo1g03340 1154 Pfam NB-ARC domain 16 96 IPR002182 GO:0043531
Mepo1g03340 1154 SUPERFAMILY L domain-like 198 617 - -
Mepo1g03340 1154 MobiDBLite consensus disorder prediction 870 904 - -
Mepo1g03340 1154 PRINTS Disease resistance protein signature 363 379 - -
Mepo1g03340 1154 PRINTS Disease resistance protein signature 77 91 - -
Mepo1g03340 1154 MobiDBLite consensus disorder prediction 880 896 - -
Mepo1g03340 1154 Coils Coil 1001 1021 - -
Mepo1g03340 1154 Gene3D Ribonuclease Inhibitor 224 478 IPR032675 -
Mepo1g03340 1154 Gene3D Ribonuclease Inhibitor 479 641 IPR032675 -
Mepo1g03340 1154 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 453 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03340 Mepo-Chr1 38500318 38504765 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03340 8 468 WRKY Transcription Factor Family AT4G12020 35.163 1.24e-52 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03340 - - mtr:25501119 1200.65