LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo1g03337	ATGGCTGCACAACTCTCTGGCTTTCGTTTCAAGATTGGGGATGGACACGAATATGAATTTATTGAGACTATCGTTGAGGAAATCTATAGAAAAGTTACTCATGTTCTTTTACATATTGCTGATTACCCTGTTGGAATTGAGTCTCGAGTGCTCAAAGTAAACTCACTTTTAGATCTTGGTTCTGATGATTTAGTCCACATGGTAGGCATCCACGGTATAGGTGGAATTGGTAAAACTACTGTTGCTCGAGCAGTGTATAATTCAATCAGTTACCAGTTTGAAGGTATGTGTTTCCTCGAGGATGTTAGAGGAAATTCTATGAAATTTGGGTTAGTACATCTCCAGCAGACTATGCTTTCTGAGATATGTCGAGATGAACATATTAACATTGGACATCTGACTGACGGAATTTCAGTCATAAAGCAGAGGCTCTGCCGGAAAAAGGTTCTTTTGGTTCTTGATGATGTTGACGATTTGAAGCAGCTACAGGTCATTGCAGGGGTATCTGATTGGTTTGGTTCTGGAAGCAGAGTCATTATTACAACACGGGACAAGCATTTGCTAGCCAGTCATGGTGTTGAAAGAGCATATGCGGTGGAGGCATTAAATGAAAGAGAATCTCTTGATTTGCTTTGTTGGAATGCTTTCAAAACCGACCAAGTCGATCCAAGTTATGCAGACGTTTTAAAACGTGCATTGACTTTTGCCTCTGGGCTTCCATTAGCTTTGCAAGTAGTAGGCTCCTACTTGTTTGGAAGAAGTATAAATGAATGGATAAGTGCATTGGATCTGTATGAAAGAGTTCCTGAGAAACATATCCAAACGGTACTCAAGTTAAGTTATGATTCCTTGGAGGAAGAAGAACAGAGTATTTTTCTTGATATTGCTTGTTTCTTCAATGGGCATAAGTTAGAAGATGTTACGGATATGCTTTCGGCTCGTTATGGTGAATCTACAAAATATAGTATTGAAGAATTGATTGAAAAATCTCTCATAAAGATTGATGGTGGTCTTGTGACATTACATAACTTGATACAAGACATGGGTAGAGAAATTGTCCGACAGGAATCACCAATTGAGCCTGGCAAACGTAGTAGGTTATGGTCCTACGAAGATGTACTTCACGTTTTACAAGAAAATTCGGTGAGTTATAAGATGGGTTCTAGTACAATTGAAAGCTTATTTCTGGATTTCCCCAAAGATGAAGTGAACTCAAATAGATCCAAAGGTAAAGAAATATATTGGGATGGAGAAGCTTTAAAGAAGATGCCAAACCTCAGAATACTTATTATTGAAAGTGGTTGTTTTAACAAAGGCCCCACACATCTTCCCAACAGTTTAAAAGTGTTGAAATGGCGGGAGTATCCTTCACCATCATTACCAAATGATTTTCATCCAAAGAAGCTCGCCATACTCGAGTTACCTGCAAGTTGCATGGCAGTAATCGAACCAATTCAGCGGTTTATTTGTCTAAAGGTTTTGAATTTCAGCAACTGTGAACTGGTAACTCGTATACCTGATGTATCTGGCCTCCCAAATTTAGAGAAATTGTCATTTAGAGATTGTGAGAAATTATCGAAAATTCACGAGTCAGTTGGATTTCTGGATAAACTTAGATACTTGGATGCTTTTCATTGCAAGAATCTGAAGACTTTTCCACCCATCATATTGACCTCTCTTAAACAGCTCAACCTTTCACATTGCTCAACTCTCGAGAGTTTCCCAGAAATATTGGGGAAGATGGAAAACTTAACAGAGCTTCGTATAATCGGAAGTCCTATAAAAGAATTGCCATCTTCAATTCAAAACCTTAATCGGCTTCGAAAATTAGAACTACAAATCTGTGGAATGGTTCAGTTACCAAGTAGCATTGCCATGTTTTCACAACTTGGTTTGATGTGTGTTTCGAGATGTGAAGGGTTGTGGTTATCTAAACAGGACATAAGTGAAGAATGGGAGACCAAGTCTTCGAAGACAGAATTTCTTATTCTGTCCTACTGCAATTTATCAGATGATTTCCTTCCCATAGGTCTTACTTGGTTTGCGAATGTGAAAGATTTGGACCTATCCGGGAATAATTTCACTATTCTTCACGCATGCATCAAAGAGTGTCACTTTCTCAGGAACCTAAAGCTAGATGATTGCGTGCTTATACGAGAAATTACAGTGATACCATGCAAATTAGAAACACTTTCTGCAAAACGATGCAAATCCTTGAAATACATAGACCTTACAGAAGAATGTCAGTCTTTGAGAGAACTTATTCTGGACGACTGTATTTATCTTCGAGAAATTGAAGGGGTTCTGCCAAACTTGGATCATTTCTCTGCAAAAAACTGCACTCTATTGACTTCTCAGTGTGCAAGCTTGTTAGTGAATCAGGAAATGATTGAAGCCGGAAACAAGATGTTTTCTTTGCCAGGAACAAAGATTCCAGAGTGGTTTTCACACCGTACAAGTGGAGATTCAATATCTTTCTGGTTTCGTAACAAATTCCCTGCAATTTGTCTGTGCCTTGTTATTGGACAGGCAGATGAGCTACCTATCTCAGTCAAGTTTAGCCCGAAAGTGTTCCTCAATGGCAACGAACAGTCCAGTGGCAATCAAGTAGTCTACAAGTTCAGGATAGCTACTGATCATATACTTTTGTTTGATGGGCAGATGCTAAAATTTGAAGATAATGGGGAAATAGTGTTTTCAGACAACGAGTGGAATCATGTGGTGGTTTCATATGAGGATCTTATTACCAACTATGGGTTTCCAATCAAAGTGGTTGCCAAATATAATGGAATCCATGTATCTCAACAAAGTAGTATTGAGGATATCCGATTCAACAATCCCCAACAAACATTGATAAATGTGAATTTCAATCCCGATTCAATCGTGGGGTCACCTCAAAGAGTAAAGATTATGACTAAGAGACCCCAGGAAGACCAAACCACTGTGCTGTCTCCCTCACTCACATCAACACAATCTCCTTCTCCACCCTCTGAAATAAAAAAAGGCCTTGTCACTCTTCCCACATTTCCAGTTAAGATGCCTTTAGGAGATGTGGGAAGAGAAAGTTCAGAGAATCTTTCCGATAATGAAGCTTATGCTACTGCAATTCAAAATGAGAGGAGTCTCATTCAAAGATGTAGTGAGGGTGATGATGTCGAGCTGGAATTAGTATCCACTGAAGAGGAGTCTTCTTCCAACACCGAAGGTTCTGACTCGGATGATCCCTTTGACTTAATTAATAGAAAACTATGCGTTAGTGGCAAGAAAACCATATCTTCTGGGGTAAGTTCTGGAGATGCAAATCTAAGATCTATTAGAGAGACTGTTAATTCACTGGAGTTATTGATGATTAAGGACTTGTCCGAAGTCTCTGCTGATCCTTCCGCACATTCCAAACTTCGTCAGCTCTTGGATCTATTGAGTACAAGTAGCCACCCCAAGGTGACAATAGAGATGAAGGAGGCAATTGCTGAGTTCAAGAGAAAGGCCTTTGCATCATTCCATGAATTCCAAGCCACTGTTGAATCTGTGAGTAAGCTGAAGAATTATGAGAATCATCTGGCCAGAATTCAGCAGGAGACTGTGGCCGGCAAGGATCAATGGAAGGACTTCAAAAAATCAATAAAGAAGGTTTCTTTGTACATCAAGGCCGAAAATAGTAGGAAAAAGGAACTAGAGTCAGAAATTGCAACTTTAAGAAAACAGTTAGCTACCAAAGAAAAGGACCTCGAACAACTTGTGTTGAATCTCAAGAATCAGGAGACAACACTCTCAACTTATTCAACAAGTTATGCTTCTCTTAACGAACATGCTCGAGCACTATCAGAAGAAGCTGATGATCTACTTGCTTCAAGCGGTGAGATAAAACGTGATGGCGAAGCAGCTGAAGTAGAGCAGAGTAGGCTCAAGTGGACTTGGTCTATTGACCTAACTGGCCAGCTTAATAAAATGAAAGAAAACATTCTTGGCTTACATGAGTAG	3981	0.3944	MAAQLSGFRFKIGDGHEYEFIETIVEEIYRKVTHVLLHIADYPVGIESRVLKVNSLLDLGSDDLVHMVGIHGIGGIGKTTVARAVYNSISYQFEGMCFLEDVRGNSMKFGLVHLQQTMLSEICRDEHINIGHLTDGISVIKQRLCRKKVLLVLDDVDDLKQLQVIAGVSDWFGSGSRVIITTRDKHLLASHGVERAYAVEALNERESLDLLCWNAFKTDQVDPSYADVLKRALTFASGLPLALQVVGSYLFGRSINEWISALDLYERVPEKHIQTVLKLSYDSLEEEEQSIFLDIACFFNGHKLEDVTDMLSARYGESTKYSIEELIEKSLIKIDGGLVTLHNLIQDMGREIVRQESPIEPGKRSRLWSYEDVLHVLQENSVSYKMGSSTIESLFLDFPKDEVNSNRSKGKEIYWDGEALKKMPNLRILIIESGCFNKGPTHLPNSLKVLKWREYPSPSLPNDFHPKKLAILELPASCMAVIEPIQRFICLKVLNFSNCELVTRIPDVSGLPNLEKLSFRDCEKLSKIHESVGFLDKLRYLDAFHCKNLKTFPPIILTSLKQLNLSHCSTLESFPEILGKMENLTELRIIGSPIKELPSSIQNLNRLRKLELQICGMVQLPSSIAMFSQLGLMCVSRCEGLWLSKQDISEEWETKSSKTEFLILSYCNLSDDFLPIGLTWFANVKDLDLSGNNFTILHACIKECHFLRNLKLDDCVLIREITVIPCKLETLSAKRCKSLKYIDLTEECQSLRELILDDCIYLREIEGVLPNLDHFSAKNCTLLTSQCASLLVNQEMIEAGNKMFSLPGTKIPEWFSHRTSGDSISFWFRNKFPAICLCLVIGQADELPISVKFSPKVFLNGNEQSSGNQVVYKFRIATDHILLFDGQMLKFEDNGEIVFSDNEWNHVVVSYEDLITNYGFPIKVVAKYNGIHVSQQSSIEDIRFNNPQQTLINVNFNPDSIVGSPQRVKIMTKRPQEDQTTVLSPSLTSTQSPSPPSEIKKGLVTLPTFPVKMPLGDVGRESSENLSDNEAYATAIQNERSLIQRCSEGDDVELELVSTEEESSSNTEGSDSDDPFDLINRKLCVSGKKTISSGVSSGDANLRSIRETVNSLELLMIKDLSEVSADPSAHSKLRQLLDLLSTSSHPKVTIEMKEAIAEFKRKAFASFHEFQATVESVSKLKNYENHLARIQQETVAGKDQWKDFKKSIKKVSLYIKAENSRKKELESEIATLRKQLATKEKDLEQLVLNLKNQETTLSTYSTSYASLNEHARALSEEADDLLASSGEIKRDGEAAEVEQSRLKWTWSIDLTGQLNKMKENILGLHE	1326

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo1g03337	1326	MobiDBLite	consensus disorder prediction	1059	1073	-	-
	Mepo1g03337	1326	SUPERFAMILY	L domain-like	413	784	-	-
	Mepo1g03337	1326	Gene3D	-	31	194	IPR027417	-
	Mepo1g03337	1326	Pfam	NB-ARC domain	52	283	IPR002182	GO:0043531
	Mepo1g03337	1326	Coils	Coil	1264	1284	-	-
	Mepo1g03337	1326	Gene3D	-	201	285	IPR042197	-
	Mepo1g03337	1326	Gene3D	Ribonuclease Inhibitor	657	824	IPR032675	-
	Mepo1g03337	1326	SUPERFAMILY	"Winged helix" DNA-binding domain	272	378	IPR036390	-
	Mepo1g03337	1326	MobiDBLite	consensus disorder prediction	974	1001	-	-
	Mepo1g03337	1326	MobiDBLite	consensus disorder prediction	975	998	-	-
	Mepo1g03337	1326	MobiDBLite	consensus disorder prediction	1055	1075	-	-
	Mepo1g03337	1326	Gene3D	Ribonuclease Inhibitor	400	656	IPR032675	-
	Mepo1g03337	1326	Coils	Coil	1215	1256	-	-
	Mepo1g03337	1326	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	2	651	IPR044974	GO:0006952
	Mepo1g03337	1326	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	34	295	IPR027417	-
	Mepo1g03337	1326	PRINTS	Disease resistance protein signature	555	571	-	-
	Mepo1g03337	1326	PRINTS	Disease resistance protein signature	67	82	-	-
	Mepo1g03337	1326	PRINTS	Disease resistance protein signature	143	157	-	-
	Mepo1g03337	1326	PRINTS	Disease resistance protein signature	236	250	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo1g03337	Mepo-Chr1	38475108	38480853	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo1g03337	3	638	WRKY Transcription Factor Family	AT4G12020	32.827	8.61e-73	266

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo1g03337	-		-	mtr:25501119	1411.36