Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03336 ATGGCTGGTCGAGGTTCCTTTTACTATGATGTCTTCTTCAGCTTCAGAGGTGAAGACACAAGACTTGGTTTTACAGGAAACCTCTACAGTGCTCTGAGTCAAAGAGGAATCCACAGCTTCTTTGATGATAAGGAGATTCGAAAAGGAGATGAAATAACTCCATCACTTGTCAAGGCAATTAAAGAATCCAAGATTGCCATCATTGTTTTTTCTCAAAACTATGCTTTTTCTTCCTTTTGTTTAGATGAACTTTCTACCATTCTAGAGTGCTATGAGGAGAACAAGGGTCAACTTGTTTTACCTGTTTTCTTCAACGTTGATCCTTCTGATGTACGACACTGCAGAGGAAAATATGGTCAAGCATTGGAAAATCTTGAGGAGAGATTCAAGGGTAACAAGGAGAAACTCAACAAATGGAGGACTGCTCTACACAAGGCAGCTAGCATAGCTGGCTTCACATTCAAGAATGGGAATGGATATGAATGTGAATTCATTTGGCGTATCTTCAAGGAAGTCTCCCTCAAGGTTAATCGTAGACTTTTACATGTTGCGAATTATCCAGTTGGATTGGAGTCTCGAGTGGATGAAGTAATCTCACGTCTGAATGTTGGCTCTGATGACGTGGTCCACATGGTAGGTATACATGGAATTGGGGGAATTGGTAAAAGTACTATTGCTCGAGCAGTATATAATTCCATTAGTCACCACTTTGAAGGTTTCTGTTGTTTTCTCGAAAATGTGAGGGAGAATTCACGCAAATATGGCTTAGGTCATCTCCAACAAATGGTTCTTTCTGATATACTTGGAGACGAGGATTTTAAGTTGAGAAATGTTAGCAATGGAATGCCAATGATAGAGCAAAGGCTCTGCAGTAAAAAGGTTCTTTTGGTTCTTGATGATGTTGACAAAATAGAGCAGTTGCAGGCTATTGCCGGAGCACCTAACTGGTTTGGTTTGGGTAGCAGAGTAATCATTACAACTCGGGGCTTAGGCTTACTAAAACATCATGAGGTTAAAAGAACATATGAGGTGGAGGAGTTGAATGACAAAGAAGCTCGTGAATTGCTTTGTTGGAATGCTTTCAAAACTGACAAAGTTGATTCAAGATACACCGCCATTTTGAACCGTGCAGTGGGTTATGCTTCTAGGCTTCCGTTGGCTTTGGAAGTAATAGGTTCCAACTTGTTCGGAAAAGAGGACGACGAATGCACACGTACATTAGATCGGTACGACCGATTTCCAGATAAAAAGATCAATGACATACTTAAAGTCAGCTATGATTCCTTGGAGGAAGATGAGGGGAATGTTTTTCTTGACATTGCTTGTTTCTTCAATGGACATAAGTTGGCAGATGTTGAAGATATACTTTCGGCTCATTATGGTGTCTCAGTGAAATATAGCATTGAAGAACTGATTGGAAAATCTCTGATAAAGATTGACGGTGGTCTTATGACATTACATTACCTGATACAAGACATGGGCAGAGAAATTGTCCGACTTGAATCACCACATGAGCCTGGTAAACGTAGTAGGTTATGGTTTTGTGAAGATGTAGTCCAAGTTTTAAATGAAAATAAGGCATTTTCACTTTTGACAATTTTGGATTTTAGCAACAGTGAATCTGTAACTGAAATACCTGATGTATCTGGTGTCCGAAATTTAGAAAAATTATCATTTAGACGTTGTGAGAATTTAACTAAAGTTCATGACTCAGTTGGGCGTCTGGGAAAGCTTATGATATTGGATGCTTCTGGTTGCAAGAATCTGAAGACTTTTCCACCCATCATGTTGACCTCTCTTGAACAACTCAATCTTTCACATTGTTCAATTCTTGAGAGTTTCCCAGAAATATTGGGGAAGATGGAAAAAATAACAGAAATTCAAATAAGGGGGAGTCCTATAAAGGAATATCCATTTTCAATTCAAAACCTTACTCGGCTTCAAAAATTGGAATTGCAAATGTGTGGAATGGTTCAGTTACCTAGTACCATTTTTATGTTGCCTGAACTAAGTTTGATGCATGTTTCAAAATGTGAAGGGTTGGCCTTATCTGAACAAGAAAAATGTGATAAAACAGTGCTCAATAGGTCTTAG 2094 0.3887 MAGRGSFYYDVFFSFRGEDTRLGFTGNLYSALSQRGIHSFFDDKEIRKGDEITPSLVKAIKESKIAIIVFSQNYAFSSFCLDELSTILECYEENKGQLVLPVFFNVDPSDVRHCRGKYGQALENLEERFKGNKEKLNKWRTALHKAASIAGFTFKNGNGYECEFIWRIFKEVSLKVNRRLLHVANYPVGLESRVDEVISRLNVGSDDVVHMVGIHGIGGIGKSTIARAVYNSISHHFEGFCCFLENVRENSRKYGLGHLQQMVLSDILGDEDFKLRNVSNGMPMIEQRLCSKKVLLVLDDVDKIEQLQAIAGAPNWFGLGSRVIITTRGLGLLKHHEVKRTYEVEELNDKEARELLCWNAFKTDKVDSRYTAILNRAVGYASRLPLALEVIGSNLFGKEDDECTRTLDRYDRFPDKKINDILKVSYDSLEEDEGNVFLDIACFFNGHKLADVEDILSAHYGVSVKYSIEELIGKSLIKIDGGLMTLHYLIQDMGREIVRLESPHEPGKRSRLWFCEDVVQVLNENKAFSLLTILDFSNSESVTEIPDVSGVRNLEKLSFRRCENLTKVHDSVGRLGKLMILDASGCKNLKTFPPIMLTSLEQLNLSHCSILESFPEILGKMEKITEIQIRGSPIKEYPFSIQNLTRLQKLELQMCGMVQLPSTIFMLPELSLMHVSKCEGLALSEQEKCDKTVLNRS 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03336 697 Gene3D - 177 342 IPR027417 -
Mepo1g03336 697 FunFam Disease resistance protein (TIR-NBS-LRR class) 6 178 - -
Mepo1g03336 697 PRINTS Disease resistance protein signature 211 226 - -
Mepo1g03336 697 PRINTS Disease resistance protein signature 595 611 - -
Mepo1g03336 697 PRINTS Disease resistance protein signature 381 395 - -
Mepo1g03336 697 PRINTS Disease resistance protein signature 288 302 - -
Mepo1g03336 697 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 152 IPR035897 -
Mepo1g03336 697 Gene3D - 346 430 IPR042197 -
Mepo1g03336 697 Pfam NB-ARC domain 191 398 IPR002182 GO:0043531
Mepo1g03336 697 Gene3D - 8 176 IPR035897 -
Mepo1g03336 697 Coils Coil 122 142 - -
Mepo1g03336 697 SMART till_3 8 149 IPR000157 GO:0007165
Mepo1g03336 697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 440 IPR027417 -
Mepo1g03336 697 ProSiteProfiles TIR domain profile. 7 176 IPR000157 GO:0007165
Mepo1g03336 697 SUPERFAMILY L domain-like 510 679 - -
Mepo1g03336 697 Pfam TIR domain 9 172 IPR000157 GO:0007165
Mepo1g03336 697 Gene3D Ribonuclease Inhibitor 597 687 IPR032675 -
Mepo1g03336 697 Gene3D Ribonuclease Inhibitor 509 596 IPR032675 -
Mepo1g03336 697 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 674 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03336 Mepo-Chr1 38470336 38473773 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03336 188 664 WRKY Transcription Factor Family AT5G45050 28.080 1.32e-42 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03336 - - mtr:25501119 993.801