LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo1g03323	ATGTCTTCCTTTAAGGCCTATGGTAAAGTGGATGAATCCGCCCAAGCCATGTTCGAAGTTCGAAGGAAATCGCGAAAGCGAATAATTATCATAAGCTTGTCCACAATTGTCCTCGTTGGTATCGTTTTTGCAGCGGTGTTTGGAACCGTTGCTCACAACAATGCTCGTAACGATGACAACAACAACGATAACAACGATCAATCTCTTTCAAGTTCAATTAAGGCTGTTTGTGATGTTACATTGTACAAGGAATCATGTCAAAGCAGCCTTAGTTCTCTTGTTCAACCGGGTCAGCAAATTCGACCCGAGGAGTTATTCAAATTGTCGATTCAACTGGCATTAACTGCGGTTTCGAAAGGTGTTGAGTATTTATCGGACCATGGAACTTTTAATGGCTTGAACTTGAATTTGGATAATAGAACAAAGGAAGCTTTGATCAACTGTAAGGATCTTTTGGGTCTTGCTGTTGATGATTTGAATAGCTCTTTGACTTATGGAGGGAAGTCTTCTTTGTTTGATGTTTTGGAGGACCTTGAAACTTGGTTGAGTGCTTCAGGTACCTATCAGCAAACATGCATTGATGGTTTAGAACAGGCAGAAGAGGTGTTAAAGTCTAGTGTTACAACCAATCTCAAAAACTCTACAGAATTTACAAGCAACAGTCTTGCCATCATCACATGGCTTAACAAGGCTGCATCTTCGGTGAACTTTAGACGCTTACTGAGTTTATCGCAACAAAATGAAGAACCAAACTGGCTTCATCATAAAGACAGAAAGTTACTTCAAAAAGACAGTGATTTGAAGAAGAAAGCCGACATTGTTGTCGCGAAAGATGGGAGTGGGAAATACGAAACCATTTCAGCTGCATTGAAACATGTCCCTAATAAAAGTGACAACAGGACCGTGATCTATGTGAAGAAAGGGATTTATTATGAAAATGTTAGGGTGGAAAAGACTAAATGGAATGTCATGATAATTGGTGATGGAATGAATGTTACTATTGTTTCTGGAAGTCTTAATTTTATAGATGGCACACCAACATTTTCAACAGCAACATTTGCTGTGTTTGGGAGAAATTTCATTGCAAGAGACATAGGCTTTAAGAACACAGCTGGTCCACAAAAACACCAAGCAGTAGCACTAATGACAAGTGCAGATCAAGCAGTTTTCTACAAATGTTCGATGGATGCATATCAAGACACACTCTACGCTCACTCAAATCGACAATTCTACCGCGAATGCAACATCTATGGAACAGTTGATTTCATTTTCGGAAACTCAGCCGTTGTATTACAAAACTGCAACATTTTACCAAGACAACCTATGCCAGGACAGCAGAACACAATAACAGCACAAGGCAAAACTGATCCTAACATGAACACAGGAATTTCAATTCAAAATTGCAATGTTTCGCCTTTTGGAAACTTGAGTTCTGTTAAAACATATTTAGGTAGACCTTGGAAGAATTACTCAACAACAGTGTTTATGCAATCGAACTTGGGAAATTTTATTAGTCCAAATGGATGGTTACCTTGGGTTGGAGATTCTGCACCAGATACTATATTCTATGCTGAATTTCAGAATGTTGGAGGTGGTGCTTCCATGAAGAATAGGGTCAAGTGGAAGGGTTTGAAAACTATTACAAGTAAACAAGCTAATAAGTTTACAGTTAAGGCTTTTCTTAATGGAGATAGATGGATCCATGCTTCTGGTGCTACATTTAAATCTTCTCTGTAA	1737	0.3874	MSSFKAYGKVDESAQAMFEVRRKSRKRIIIISLSTIVLVGIVFAAVFGTVAHNNARNDDNNNDNNDQSLSSSIKAVCDVTLYKESCQSSLSSLVQPGQQIRPEELFKLSIQLALTAVSKGVEYLSDHGTFNGLNLNLDNRTKEALINCKDLLGLAVDDLNSSLTYGGKSSLFDVLEDLETWLSASGTYQQTCIDGLEQAEEVLKSSVTTNLKNSTEFTSNSLAIITWLNKAASSVNFRRLLSLSQQNEEPNWLHHKDRKLLQKDSDLKKKADIVVAKDGSGKYETISAALKHVPNKSDNRTVIYVKKGIYYENVRVEKTKWNVMIIGDGMNVTIVSGSLNFIDGTPTFSTATFAVFGRNFIARDIGFKNTAGPQKHQAVALMTSADQAVFYKCSMDAYQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVLQNCNILPRQPMPGQQNTITAQGKTDPNMNTGISIQNCNVSPFGNLSSVKTYLGRPWKNYSTTVFMQSNLGNFISPNGWLPWVGDSAPDTIFYAEFQNVGGGASMKNRVKWKGLKTITSKQANKFTVKAFLNGDRWIHASGATFKSSL	578

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo1g03323	578	Gene3D	-	267	578	IPR012334	-
	Mepo1g03323	578	SMART	PMEI_2	68	224	IPR006501	GO:0004857
	Mepo1g03323	578	SUPERFAMILY	Pectin lyase-like	270	574	IPR011050	-
	Mepo1g03323	578	Pfam	Plant invertase/pectin methylesterase inhibitor	72	224	IPR006501	GO:0004857
	Mepo1g03323	578	Pfam	Pectinesterase	272	564	IPR000070	GO:0030599\|GO:0042545
	Mepo1g03323	578	CDD	PMEI-like_3	75	230	-	-
	Mepo1g03323	578	PANTHER	PECTINESTERASE	35	568	-	-
	Mepo1g03323	578	FunFam	Pectinesterase	69	229	-	-
	Mepo1g03323	578	NCBIfam	pectinesterase inhibitor domain	53	228	IPR006501	GO:0004857
	Mepo1g03323	578	Gene3D	Invertase/pectin methylesterase inhibitor family protein	70	230	IPR035513	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo1g03323	Mepo-Chr1	38308990	38311181	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo1g03323	1	578	Carbohydrate Esterase	AT3G10710	57.586	0.0	669

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo1g03323	-		-	gmx:100808802	880.937

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