Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03323 ATGTCTTCCTTTAAGGCCTATGGTAAAGTGGATGAATCCGCCCAAGCCATGTTCGAAGTTCGAAGGAAATCGCGAAAGCGAATAATTATCATAAGCTTGTCCACAATTGTCCTCGTTGGTATCGTTTTTGCAGCGGTGTTTGGAACCGTTGCTCACAACAATGCTCGTAACGATGACAACAACAACGATAACAACGATCAATCTCTTTCAAGTTCAATTAAGGCTGTTTGTGATGTTACATTGTACAAGGAATCATGTCAAAGCAGCCTTAGTTCTCTTGTTCAACCGGGTCAGCAAATTCGACCCGAGGAGTTATTCAAATTGTCGATTCAACTGGCATTAACTGCGGTTTCGAAAGGTGTTGAGTATTTATCGGACCATGGAACTTTTAATGGCTTGAACTTGAATTTGGATAATAGAACAAAGGAAGCTTTGATCAACTGTAAGGATCTTTTGGGTCTTGCTGTTGATGATTTGAATAGCTCTTTGACTTATGGAGGGAAGTCTTCTTTGTTTGATGTTTTGGAGGACCTTGAAACTTGGTTGAGTGCTTCAGGTACCTATCAGCAAACATGCATTGATGGTTTAGAACAGGCAGAAGAGGTGTTAAAGTCTAGTGTTACAACCAATCTCAAAAACTCTACAGAATTTACAAGCAACAGTCTTGCCATCATCACATGGCTTAACAAGGCTGCATCTTCGGTGAACTTTAGACGCTTACTGAGTTTATCGCAACAAAATGAAGAACCAAACTGGCTTCATCATAAAGACAGAAAGTTACTTCAAAAAGACAGTGATTTGAAGAAGAAAGCCGACATTGTTGTCGCGAAAGATGGGAGTGGGAAATACGAAACCATTTCAGCTGCATTGAAACATGTCCCTAATAAAAGTGACAACAGGACCGTGATCTATGTGAAGAAAGGGATTTATTATGAAAATGTTAGGGTGGAAAAGACTAAATGGAATGTCATGATAATTGGTGATGGAATGAATGTTACTATTGTTTCTGGAAGTCTTAATTTTATAGATGGCACACCAACATTTTCAACAGCAACATTTGCTGTGTTTGGGAGAAATTTCATTGCAAGAGACATAGGCTTTAAGAACACAGCTGGTCCACAAAAACACCAAGCAGTAGCACTAATGACAAGTGCAGATCAAGCAGTTTTCTACAAATGTTCGATGGATGCATATCAAGACACACTCTACGCTCACTCAAATCGACAATTCTACCGCGAATGCAACATCTATGGAACAGTTGATTTCATTTTCGGAAACTCAGCCGTTGTATTACAAAACTGCAACATTTTACCAAGACAACCTATGCCAGGACAGCAGAACACAATAACAGCACAAGGCAAAACTGATCCTAACATGAACACAGGAATTTCAATTCAAAATTGCAATGTTTCGCCTTTTGGAAACTTGAGTTCTGTTAAAACATATTTAGGTAGACCTTGGAAGAATTACTCAACAACAGTGTTTATGCAATCGAACTTGGGAAATTTTATTAGTCCAAATGGATGGTTACCTTGGGTTGGAGATTCTGCACCAGATACTATATTCTATGCTGAATTTCAGAATGTTGGAGGTGGTGCTTCCATGAAGAATAGGGTCAAGTGGAAGGGTTTGAAAACTATTACAAGTAAACAAGCTAATAAGTTTACAGTTAAGGCTTTTCTTAATGGAGATAGATGGATCCATGCTTCTGGTGCTACATTTAAATCTTCTCTGTAA 1737 0.3874 MSSFKAYGKVDESAQAMFEVRRKSRKRIIIISLSTIVLVGIVFAAVFGTVAHNNARNDDNNNDNNDQSLSSSIKAVCDVTLYKESCQSSLSSLVQPGQQIRPEELFKLSIQLALTAVSKGVEYLSDHGTFNGLNLNLDNRTKEALINCKDLLGLAVDDLNSSLTYGGKSSLFDVLEDLETWLSASGTYQQTCIDGLEQAEEVLKSSVTTNLKNSTEFTSNSLAIITWLNKAASSVNFRRLLSLSQQNEEPNWLHHKDRKLLQKDSDLKKKADIVVAKDGSGKYETISAALKHVPNKSDNRTVIYVKKGIYYENVRVEKTKWNVMIIGDGMNVTIVSGSLNFIDGTPTFSTATFAVFGRNFIARDIGFKNTAGPQKHQAVALMTSADQAVFYKCSMDAYQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVLQNCNILPRQPMPGQQNTITAQGKTDPNMNTGISIQNCNVSPFGNLSSVKTYLGRPWKNYSTTVFMQSNLGNFISPNGWLPWVGDSAPDTIFYAEFQNVGGGASMKNRVKWKGLKTITSKQANKFTVKAFLNGDRWIHASGATFKSSL 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03323 578 Gene3D - 267 578 IPR012334 -
Mepo1g03323 578 SMART PMEI_2 68 224 IPR006501 GO:0004857
Mepo1g03323 578 SUPERFAMILY Pectin lyase-like 270 574 IPR011050 -
Mepo1g03323 578 Pfam Plant invertase/pectin methylesterase inhibitor 72 224 IPR006501 GO:0004857
Mepo1g03323 578 Pfam Pectinesterase 272 564 IPR000070 GO:0030599|GO:0042545
Mepo1g03323 578 CDD PMEI-like_3 75 230 - -
Mepo1g03323 578 PANTHER PECTINESTERASE 35 568 - -
Mepo1g03323 578 FunFam Pectinesterase 69 229 - -
Mepo1g03323 578 NCBIfam pectinesterase inhibitor domain 53 228 IPR006501 GO:0004857
Mepo1g03323 578 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 230 IPR035513 -
Mepo1g03323 578 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 71 228 IPR035513 -
Mepo1g03323 578 FunFam Pectinesterase 266 578 - -
Mepo1g03323 578 ProSitePatterns Pectinesterase signature 2. 416 425 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03323 Mepo-Chr1 38308990 38311181 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03323 1 578 Carbohydrate Esterase AT3G10710 57.586 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03323 - - gmx:100808802 880.937