Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03297 ATGAAGAGGTCTCCACCATCTTCAAGTTCATCATCTTCATCTCCTGTTGAATTTGAGAATTCAATTCAATCAAAAAAGAAAAGGGCTGCTAAGAATCCAAAAAATAATACTATCAATCCCAAATCACAAAATTTCAAGAAGAAGAACCAATCAAATGGTGGGAGCAAAAGAAGCTCCATTTATAGAGGAGTTACAAGACATAGATGGACGGGAAGATTTGAAGCTCACCTATGGGATAAGGGTTCTTGGAACAACATTCAGAAAAAGAAGGGAAAACAAGGTGCTTATGATACTGAAGAAGCAGCAGCTCGTACTTATGATCTTGCATCACTTAAGTATTGGGGGAAGGATGCAACTTTGAATTTTCCGATAGAAACTTATGCAAAAGAGTATGAGGAAATGGAGAAGTCCTCAAAAGAAGAGTATTTGGCCTCTTTGAGGCGCCAAAGCAGTGGTTTTTCTAGAGGCATTTCTAAGTACCGTGGGGTTGCTAGGCATCACCATAATGGTCGGTGGGAAGCTCGTATTGGAAGAGTTTGTGGTAACAAGTACCTCTACTTGGGCACATATAAAACTCAAGAGGAGGCAGCAATGGCATATGATATGGCAGCAATAGAGTATAGAGGAATGAATGCAGTGACAAATTTTGACATAAGCAACTATGTGGACAAATTGAGGAAGAAAAATGAAGAAACAAAACAAACAGAACTACAAACAACAACAGAAATTGTTCCATATTCTCCTGATTCTAAAGAAGCATCAGAAGAACAAACACCAACAACTATACCATCACCACCACAAGAAAATCTACCACAAATTGTACCTTTACAGCCACAAGTTCAACATGTTCCTCCAACTAATCAAGAACACACATTAGTTAGTGTTATGGATCATTATTTTGACCAAGACCTACCATGGAGCTTCGTGTGTAATGGGTTGTTAGAATTTCAAGACACAAACATGGCTTTAAGCAAAGCTGATCAAGATTTAATTGATATATTTGATGGCTCAGGCTTTGTGGAAGACATTGGTTTGATGTTCAACATAGAAGAACCTTGTAGTGGTGAAAGTGATTGTGGAGGATTATTAAATGGAGATGCTGGAAACATGCTTGTGGATGAGGATGATATCAAGAAGGAAATATTATCCTTAGAATCTTTTTGA 1164 0.3789 MKRSPPSSSSSSSSPVEFENSIQSKKKRAAKNPKNNTINPKSQNFKKKNQSNGGSKRSSIYRGVTRHRWTGRFEAHLWDKGSWNNIQKKKGKQGAYDTEEAAARTYDLASLKYWGKDATLNFPIETYAKEYEEMEKSSKEEYLASLRRQSSGFSRGISKYRGVARHHHNGRWEARIGRVCGNKYLYLGTYKTQEEAAMAYDMAAIEYRGMNAVTNFDISNYVDKLRKKNEETKQTELQTTTEIVPYSPDSKEASEEQTPTTIPSPPQENLPQIVPLQPQVQHVPPTNQEHTLVSVMDHYFDQDLPWSFVCNGLLEFQDTNMALSKADQDLIDIFDGSGFVEDIGLMFNIEEPCSGESDCGGLLNGDAGNMLVDEDDIKKEILSLESF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03297 387 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 24 276 - -
Mepo1g03297 387 MobiDBLite consensus disorder prediction 33 59 - -
Mepo1g03297 387 MobiDBLite consensus disorder prediction 1 20 - -
Mepo1g03297 387 FunFam AP2-like ethylene-responsive transcription factor 59 125 - -
Mepo1g03297 387 ProSiteProfiles AP2/ERF domain profile. 60 123 IPR001471 GO:0003700|GO:0006355
Mepo1g03297 387 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Mepo1g03297 387 PRINTS Ethylene responsive element binding protein signature 199 219 IPR001471 GO:0003700|GO:0006355
Mepo1g03297 387 ProSiteProfiles AP2/ERF domain profile. 159 217 IPR001471 GO:0003700|GO:0006355
Mepo1g03297 387 SUPERFAMILY DNA-binding domain 59 125 IPR016177 GO:0003677
Mepo1g03297 387 SMART rav1_2 60 129 IPR001471 GO:0003700|GO:0006355
Mepo1g03297 387 SMART rav1_2 159 223 IPR001471 GO:0003700|GO:0006355
Mepo1g03297 387 MobiDBLite consensus disorder prediction 1 63 - -
Mepo1g03297 387 CDD AP2 158 219 IPR001471 GO:0003700|GO:0006355
Mepo1g03297 387 Gene3D AP2/ERF domain 60 125 IPR036955 GO:0003700|GO:0006355
Mepo1g03297 387 Gene3D AP2/ERF domain 158 219 IPR036955 GO:0003700|GO:0006355
Mepo1g03297 387 FunFam AP2-like ethylene-responsive transcription factor 158 219 - -
Mepo1g03297 387 SUPERFAMILY DNA-binding domain 158 219 IPR016177 GO:0003677
Mepo1g03297 387 Pfam AP2 domain 158 210 IPR001471 GO:0003700|GO:0006355
Mepo1g03297 387 Pfam AP2 domain 60 115 IPR001471 GO:0003700|GO:0006355
Mepo1g03297 387 CDD AP2 59 124 IPR001471 GO:0003700|GO:0006355
Mepo1g03297 387 MobiDBLite consensus disorder prediction 236 263 - -
Mepo1g03297 387 MobiDBLite consensus disorder prediction 231 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03297 Mepo-Chr1 38055390 38058563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03297 153 234 AP2-EREBP Transcription Factor Family AT5G57390 40.000 1.33e-12 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mepo1g03297 AP2 5.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03297 - - cam:101488375 476.092