Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03296 ATGAAGAGGTCTCCACCATCTTCAAGTTCATCATCTTCATCTTCTATTGGATTTGAGAATCCAATTCAATCAGTGAAAAAAAGAGGTGCTAAGAATCCAAAAAAGAATCTCAATGTCAAGTCACAGAATTTAAAGCAGAAGAAAAACCAAACAAATGGTGGCAGTAGAAGAAGCTCCATTTATAGAGGAGTTACAAGACATAGGTGGACTGGAAGATTTGAAGCTCATCTATGGGATAAGACTTCTTGGAACAAGATTCAGAACAAGAAGGGAAAACAAGTTTATTTGGGTGCTTATGATACTGAAGAAGCAGCAGCTCGTACCTATGATCTTGCAGCACTTAAGTATTGGGGAAAGGATGCAACCTTGAATTTTCCGATAGAAACTTATGCAAAAGAGTTTGAGGAAATGGACAAAGCCTCAAAAGAAGAGTATTTGAACTCTTTGCGGCGGCAAAGCAGTGGTTTTTCTAGAGGACTTTCTAAATACCGTGGGGTTGCCAGGCATCACCATAATGGTCGCTGGGAAGCTCGAATTGGAAGAGTTCGTGGTAACAAATACCTCTATTTGGGCACATACAAAACTCAAGAGGAGGCAGCAGTGGCTTATGATATGGCAGCAATACAACTCAGAGGAATGAATGCAGTGACCAATTTTGACATAAGCAACTATATGGACAAATTGAAGGTGGAGAAAAATGATGAAACAGAACAAACAGAACCACAATCAAACACAGAAATTGTTGCTAAGTCCCCTGATTGTGAAGAAGCATTAGAAGAACAAACAACAACTACCCCACCTCCAGATGAAAATAAACTACAAATAGAACCTTTGCAACAACAATTTCAACAACATGTTCCTCCAACTAGTCAGGAATGTGCAATAGTTAATATTATGGATCATTGTTTTGACCAAGATTATCCATGGAGCTTCATGTATAATGGATTGTTAGAGTTTCAAGACACAAGTTCGACTGTGAGCAAATGTGGTGATGATGATTTAATGAATATATTTGATGGCTCAAGCTTTGATGATAACATTGAATTTGAACTTATGTTCAACACAGAAGAACCTTGTGGTGGTGATGGTAAAAGTGATATCAATATCAGTGAAGTTTTGGAAGGTATTGATCTTTGTGGAGGATTATTAAATGGAGATGTTGGAGACATGGTTGTGGATGAGGATAGTAACAAGGAGAAAGATTTATTATCCTTAGATGATTCTTCTTCTTCACCATCATCTTCAACTACTACAATTTCTTTTTAA 1266 0.3744 MKRSPPSSSSSSSSSIGFENPIQSVKKRGAKNPKKNLNVKSQNLKQKKNQTNGGSRRSSIYRGVTRHRWTGRFEAHLWDKTSWNKIQNKKGKQVYLGAYDTEEAAARTYDLAALKYWGKDATLNFPIETYAKEFEEMDKASKEEYLNSLRRQSSGFSRGLSKYRGVARHHHNGRWEARIGRVRGNKYLYLGTYKTQEEAAVAYDMAAIQLRGMNAVTNFDISNYMDKLKVEKNDETEQTEPQSNTEIVAKSPDCEEALEEQTTTTPPPDENKLQIEPLQQQFQQHVPPTSQECAIVNIMDHCFDQDYPWSFMYNGLLEFQDTSSTVSKCGDDDLMNIFDGSSFDDNIEFELMFNTEEPCGGDGKSDINISEVLEGIDLCGGLLNGDVGDMVVDEDSNKEKDLLSLDDSSSSPSSSTTTISF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03296 421 MobiDBLite consensus disorder prediction 398 421 - -
Mepo1g03296 421 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 30 280 - -
Mepo1g03296 421 ProSiteProfiles AP2/ERF domain profile. 162 220 IPR001471 GO:0003700|GO:0006355
Mepo1g03296 421 MobiDBLite consensus disorder prediction 252 272 - -
Mepo1g03296 421 ProSiteProfiles AP2/ERF domain profile. 60 126 IPR001471 GO:0003700|GO:0006355
Mepo1g03296 421 MobiDBLite consensus disorder prediction 258 272 - -
Mepo1g03296 421 MobiDBLite consensus disorder prediction 406 421 - -
Mepo1g03296 421 MobiDBLite consensus disorder prediction 1 61 - -
Mepo1g03296 421 CDD AP2 161 222 IPR001471 GO:0003700|GO:0006355
Mepo1g03296 421 MobiDBLite consensus disorder prediction 35 59 - -
Mepo1g03296 421 FunFam AP2-like ethylene-responsive transcription factor 59 128 - -
Mepo1g03296 421 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Mepo1g03296 421 PRINTS Ethylene responsive element binding protein signature 202 222 IPR001471 GO:0003700|GO:0006355
Mepo1g03296 421 MobiDBLite consensus disorder prediction 1 21 - -
Mepo1g03296 421 SUPERFAMILY DNA-binding domain 161 222 IPR016177 GO:0003677
Mepo1g03296 421 SUPERFAMILY DNA-binding domain 59 128 IPR016177 GO:0003677
Mepo1g03296 421 SMART rav1_2 162 226 IPR001471 GO:0003700|GO:0006355
Mepo1g03296 421 SMART rav1_2 60 132 IPR001471 GO:0003700|GO:0006355
Mepo1g03296 421 FunFam AP2-like ethylene-responsive transcription factor 161 222 - -
Mepo1g03296 421 CDD AP2 59 127 IPR001471 GO:0003700|GO:0006355
Mepo1g03296 421 Gene3D AP2/ERF domain 60 128 IPR036955 GO:0003700|GO:0006355
Mepo1g03296 421 Gene3D AP2/ERF domain 161 222 IPR036955 GO:0003700|GO:0006355
Mepo1g03296 421 Pfam AP2 domain 60 118 IPR001471 GO:0003700|GO:0006355
Mepo1g03296 421 Pfam AP2 domain 161 213 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03296 Mepo-Chr1 38038882 38044988 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03296 156 233 AP2-EREBP Transcription Factor Family AT5G57390 40.698 1.05e-11 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mepo1g03296 AP2 4.8e-13 CL0081