Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03273 ATGGGATTGAGTGATAATAATTTTTATGGTCATATTTCCTCAGACTGGGGAAAATGCAAGAATCTCACAAGCCTTAAAATCTCCAACAATAGTTTAACAGGAAGTATACCACCAGAACTGGCTGAAGCAACCAATTTACATATACTTGACTTGTCCTCAAACCAACTTACGGGAGAAATTCCAAAGGAGTTGGGCAGCTTATCTTCATTGATCCAACTATCGCTGAGTAACAATCATATATCGGGAGAAGTTCCTGTATGTATTGCATCATTGAAGGAACTAGCTACCTTGGAGCTTGCAACAAATAACTTAAGTGGCTTTATCCCAAAAGAACTTGGAAGGTTATCTTTGTTATTGAAGTTGAATTTGAGCCAAAATAAGTTTGAAGGAAACATTCCGGATGAGATTGGAAAACTAAATGTTATTCAAAATCTTGATCTTAGTGGAAATTTAATGAATGGAACCATACCAGCAATGTTTGGACAGTTAAAATACTTAGAAACATTGAATCTCTCACATAATAATTTTTCTGGCACCATTCCCTTGAGCTATGGTGAGATGTTAAGCTTGATAACTGTTGATATATCATACAACCAATTTGAGGGTCAGGTTCCTAGCATTCCAGCCTTCCTAAAAGCTCCAAATGAAGCGCTTGGAAATAACAAAGGCTTGTGTGGTAATGTCTCTGGTCTAAAGCCTTGCTCAACAGCAGGTAGCAATTTTCATAGTTATAAAACGAACAAAATTTTGGTGCTAGTTTTACCTATAACTCTAGGTACTCTATTGTTAGCATTATTTGTTTATGGGCTCTCATTCCTTTTCTGCCGAACTTCAATCACAAAAGAATACAAGCCGACAGAAGAATTTCAAACTGAAAATCTATTTGCAATATGGAGCTTTGATGGAAAAATGGTGTATGAGAACATTATTGAAGCCACTGAAGAGTTTGACAACAAGTATCTCATTGGGGTTGGAGGTCATGGAAGTGTTTACAAAGCAGAGTTGCCTACTGGACAAGTTGTAGCTGTGAAGAAACTCCATTCATTACAACATGGAGAAACGTCTAATTTGAAAGCTTTTGCAAGTGAGATCAAAGCTTTAACAGAAATCCGACATAGAAACATTGTTAAGTTATACGGGTATTGTTCACACCCATTGCACTCATTTTTAGTTTATGAGCTCTTGGAGAAAGGTAGTGTCCACAATATTTTGAAAGACAATGAGCAAGCAATTATGTTAGATTGGAATAGGAGGGTAAATGCCATTAAAGGTGTAGCTAATGCTTTATGTTATATGCATCATGATTGCTCACCTTCAATTGTTCATCGTGATATATCTAGTAAGAATGTTGTTTTGGATTTGGAATATGTTGCTCATGTCTCAGATTTCGGAACAGCTAAGTTTCTTAATCTCAATTCTTCCAATTGGACCTCTTTTGTAGGCACCTTTGGATACACTGCTCCAGAACTTGTATACACAATGGAAGTAAATGAGAGGTGTGATGTGTATAGTTTCGGGGTGTTAACCTTGGAAATATTTTTTGGAAAGCATCCTGGAGACATTGTATCTACGTTGTTGCAATCAAGTACCGTAGGCCTGACTAGTGACGTTATGTCGTTGACTGCCATATTAGATCAACGCCTCGCTTGTCCTACTAATGATATCGCAAAAGAGGTGGTATCAATTATAAGGATTGCATGTCATTGCTTAACTGAGAGCCCACATAGTCGCCCTACAATGGCCCAAATTTGCAAGGAGATTGCAATATCAAAGTCATCTTCAAGGAGTTAA 1791 0.373 MGLSDNNFYGHISSDWGKCKNLTSLKISNNSLTGSIPPELAEATNLHILDLSSNQLTGEIPKELGSLSSLIQLSLSNNHISGEVPVCIASLKELATLELATNNLSGFIPKELGRLSLLLKLNLSQNKFEGNIPDEIGKLNVIQNLDLSGNLMNGTIPAMFGQLKYLETLNLSHNNFSGTIPLSYGEMLSLITVDISYNQFEGQVPSIPAFLKAPNEALGNNKGLCGNVSGLKPCSTAGSNFHSYKTNKILVLVLPITLGTLLLALFVYGLSFLFCRTSITKEYKPTEEFQTENLFAIWSFDGKMVYENIIEATEEFDNKYLIGVGGHGSVYKAELPTGQVVAVKKLHSLQHGETSNLKAFASEIKALTEIRHRNIVKLYGYCSHPLHSFLVYELLEKGSVHNILKDNEQAIMLDWNRRVNAIKGVANALCYMHHDCSPSIVHRDISSKNVVLDLEYVAHVSDFGTAKFLNLNSSNWTSFVGTFGYTAPELVYTMEVNERCDVYSFGVLTLEIFFGKHPGDIVSTLLQSSTVGLTSDVMSLTAILDQRLACPTNDIAKEVVSIIRIACHCLTESPHSRPTMAQICKEIAISKSSSRS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03273 596 SUPERFAMILY L domain-like 3 226 - -
Mepo1g03273 596 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 110 234 - -
Mepo1g03273 596 Coils Coil 594 596 - -
Mepo1g03273 596 Pfam Leucine rich repeat 44 104 IPR001611 GO:0005515
Mepo1g03273 596 FunFam Nuclear pore complex protein NUP107 1 109 - -
Mepo1g03273 596 FunFam Leucine-rich repeat receptor protein kinase MSP1 279 394 - -
Mepo1g03273 596 PANTHER LEUCINE RICH REPEAT KINASE 2 2 592 - -
Mepo1g03273 596 SUPERFAMILY Protein kinase-like (PK-like) 298 586 IPR011009 -
Mepo1g03273 596 ProSitePatterns Protein kinases ATP-binding region signature. 322 345 IPR017441 GO:0005524
Mepo1g03273 596 Gene3D Phosphorylase Kinase; domain 1 277 394 - -
Mepo1g03273 596 Gene3D Ribonuclease Inhibitor 1 237 IPR032675 -
Mepo1g03273 596 ProSiteProfiles Protein kinase domain profile. 316 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03273 596 FunFam MDIS1-interacting receptor like kinase 2 395 593 - -
Mepo1g03273 596 ProSiteProfiles Leucine-rich repeat profile. 45 68 IPR001611 GO:0005515
Mepo1g03273 596 Pfam Protein kinase domain 318 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03273 596 ProSitePatterns Tyrosine protein kinases specific active-site signature. 440 452 IPR008266 GO:0004672|GO:0006468
Mepo1g03273 596 Gene3D Transferase(Phosphotransferase) domain 1 395 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03273 Mepo-Chr1 37809073 37810999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03273 1 492 Receptor kinase-like Gene Family AT4G08850 46.386 1.07e-146 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo1g03273 Pkinase 4.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03273 - - tpra:123910542 898.271