Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03246 ATGGTGCCATTGAGGTCTATTATTAAAGAAGCATGCGAGAAAACATTAATTGTTACAAAGTTCTTTTGCGTTTTACACATTACCAACAAATATCTAGTCGATCCTGTTCAGACTATTGGTCCTAGCATGCTTCCTACAATTGATGTGACACCAAGCCTCTATCTTGCTGAAAGGATCTCACCTCGATTTGGTAAAGTTGCTCAGGGAGATATTGTAATCCTCCGCTCATCTCGTAACCCTAGAATGTGCATCACAAAGCGCTTGGTTGGATTAGAGGGTGATACCATCACATATGTTGCTGATCCTAACGATGATAAGCAGGAGACAGTTGTGGTTCCAAAGGGTCACGTTTGGATAGAGGGTGATAACAAATATAAAAGCAACGATTCTAGAAATTTTGGTCCAGTTCCTTATGGCCTTATCGAGAGTAGGTTATTCTGGAAGGTATCTCCACTTAAAGATTTTGGATCGATCCGGAATAAATGA 486 0.4033 MVPLRSIIKEACEKTLIVTKFFCVLHITNKYLVDPVQTIGPSMLPTIDVTPSLYLAERISPRFGKVAQGDIVILRSSRNPRMCITKRLVGLEGDTITYVADPNDDKQETVVVPKGHVWIEGDNKYKSNDSRNFGPVPYGLIESRLFWKVSPLKDFGSIRNK 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03246 161 Pfam Signal peptidase, peptidase S26 108 142 IPR019533 GO:0004252|GO:0006465
Mepo1g03246 161 Pfam Signal peptidase, peptidase S26 21 99 IPR019533 GO:0004252|GO:0006465
Mepo1g03246 161 CDD S26_SPase_I 35 144 IPR019533 GO:0004252|GO:0006465
Mepo1g03246 161 ProSitePatterns Signal peptidases I signature 3. 117 130 IPR019758 GO:0004252|GO:0016020
Mepo1g03246 161 PRINTS Bacterial leader peptidase 1 (S26A) family signature 84 96 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo1g03246 161 PRINTS Bacterial leader peptidase 1 (S26A) family signature 112 131 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo1g03246 161 PRINTS Bacterial leader peptidase 1 (S26A) family signature 31 47 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo1g03246 161 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 1 160 - -
Mepo1g03246 161 Gene3D Umud Fragment, subunit A 28 160 - -
Mepo1g03246 161 FunFam Inner membrane protease subunit 1 29 157 - -
Mepo1g03246 161 SUPERFAMILY LexA/Signal peptidase 31 158 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03246 Mepo-Chr1 37375577 37379823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03246 43 158 MADS-box Gene Family AT1G29960 50.427 8.14e-39 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03246 K09647 - csin:114265272 209.92