Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03231 ATGCTGATATTAGTTCTAGGACTAATTTCAGCTACTTTGCTAGTGATTATTGTAGCAGTTTATGGCATTTGTTACATGAAAAGATCATCAAAAAATGATACTAAAGACATAGAAAGCTTGGAAGAAAAGCATGAAGAGGTGAAGGAGGATTTGATCATCTTTGAAGGTGGAGAGGATTTGACAATATGTGATATATTGGATGCACCAGGTGAAGTGATTGGAAAATCAAATTATGGAACACTTTATAAGGCTTTGTTGCAAAGGAGTAATAAAGTGAGGTTATTGAGGTTTTTGAGACCTGTTTGTACTACAAGAGGTGAAGAATTGGATGAAATGATTTTGTTTCTTGGAAGATTAAAGCATCCTAATTTGGTTCCTCTTTTAGGATTTTATACTGGACCAAGGGGTGAGAAGCTTCTTGTTCATCCATTTTATAGACATGGGAATTTGACTCAATTCATAAGAGATGGAAATGGAGAGAGTTACAAATGGTCAAACATATGTACAATATCAATTGGTATAGCAAAAGGATTAGAACATCTTCACACATCACATGAAAAGCCAATTATCCATGGAAACCTAAAGTCAAAAAACATCCTTTTGGACAGCTCCTATCATCCACACATCTCAGATTCAGGACTCCATCTTCTCTTGAATCCAACTGCTGGCCAAGAAATGCTTGAAAGTTCATCTGCTCAAGGCTATAAACCACCTGAACTAATCAAAATGAAGGATGCTAGCGAAGAAACCGATATATACAGCCTCGGTGTAATCTTGCTTGAATTGCTTTCAGGAAAGGAACCTATCAATGAACATCCAACTCCTGACGAGGACTTCTATTTGCCGAATTTCATGAGAAATGCTGTTCTTGGACATAGAATTTCTGATTTATATCATCCTGCTATTCTTCTCAGAAACGGCATAGACGATGAAATTCAAGTTACAGAAGAATGTATTCTCAAATTTTTTCAACTTGCTATGGCTTGTTGTTCACCTTCACCTTCAATTAGACCTAACATAAAGCAAGTTATTAGGAAGCTTGAAGAAATTATACATTAG 1059 0.3588 MLILVLGLISATLLVIIVAVYGICYMKRSSKNDTKDIESLEEKHEEVKEDLIIFEGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTTRGEELDEMILFLGRLKHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLTQFIRDGNGESYKWSNICTISIGIAKGLEHLHTSHEKPIIHGNLKSKNILLDSSYHPHISDSGLHLLLNPTAGQEMLESSSAQGYKPPELIKMKDASEETDIYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRISDLYHPAILLRNGIDDEIQVTEECILKFFQLAMACCSPSPSIRPNIKQVIRKLEEIIH 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03231 352 Gene3D Phosphorylase Kinase; domain 1 68 144 - -
Mepo1g03231 352 Pfam Protein tyrosine and serine/threonine kinase 71 347 IPR001245 GO:0004672|GO:0006468
Mepo1g03231 352 SUPERFAMILY Protein kinase-like (PK-like) 70 348 IPR011009 -
Mepo1g03231 352 ProSiteProfiles Protein kinase domain profile. 67 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03231 352 Gene3D Transferase(Phosphotransferase) domain 1 146 352 - -
Mepo1g03231 352 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 28 350 - -
Mepo1g03231 352 Coils Coil 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03231 Mepo-Chr1 37111970 37115250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03231 24 350 Carbohydrate Esterase AT5G61570 59.763 6.60e-139 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo1g03231 PK_Tyr_Ser-Thr 8.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03231 - - gmx:100788898 597.816