Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03228 ATGGGCTCGAACGATAAGAACGAAGTGAAATTCAATTCACCAGACATCATTGGGGTGTTGACTGGTGTTAGAAGTGAGAGGGAACTTGAGAGGAATGGAAACATGACAAAGCTCAATGTCATTGAACTTGAGGCTGGACGCTATGTTGATGACCTCAACAACTTCATAGCAAGTGGAGATATCCACAATGCTATTGTTATCATCCAGCTTGCCAAAGCAAAAACTTTTCAAGATAAAATACATGTTCAAAACTGTCTTGGATGCACCAAAGTAATTTACAAACCTACTTGCAATGATGTTGTTGCCATGAGGAATAGGCTGCCTGATACTGTTGATACTCCATCCCCACTTGGTTTAACCCAGCTGCAACCTGAAGCTAAGCTCGACCCTAGGGAGGAGTTTTTGTTTGGAACACCCAGAACCACAATGCAAGGGCTCAAAGATGCAACTACTAATTTTGTTTTTGTTGTGCTTGGGACAATCAAGAGAATTGTCAACAGGGAAAATTTCTGGTACACTGCATGTGTGTGCAGCAAAGCTGTCATTCCAGATTCTCAAATGTTGTACTGTGAGAAGTGTGACAGACATGTAAAGAAGGTGTTCTCTAGGTACTGTTTAAGGGTGAGAGCAATTGATCACACCGATTGTGCTACATTGGTGATCTTTGACAAAGAAGCAACTGCCCTTCTCAACAAGAGTTGTGTTGACATGCTAGCTGAACATGGAGTGGCCATTTCTGAGGGTCATTTACCTCCTGAGCGTGCTGGAATCATTGGCAAAACATTTCTCTTCAAGGTTGAGACCAAGGCTGATCAAAGCCCAAGATTTAAGCTGTCTTTATATGTGTCGTGCCGGATATTATCAATGAGTTCACGAAGAAATGGGGGGAAGAAGAAGCCGCATTCTTCAAAAACACAATGCCTCATCTCTAAGTGTTTGTTGGATAAGAGGAAAACTCTTATGATTGCTGGCTCTTCTAATGTGTTGACTCAAGATGACATATCATTATCTGAACCTGTTGAGAAGTTCAAGGCAAGGGTGTTGGGGGAATGCTCTGGAGTTGTCACACAGGATCTCTTGCCAAAATTTGCAATGGAAGAATGTAATTCTGATGTGGTGGAGATATCCCACACATGTTCTTCATCATCTAGCAAGAGGGTATCTCCTACCCAAGATGAAGATGACATGAACATCCCACTCAAGATGCTCAAGAGGACTGTGAAAATTGAAAAGCCTTAG 1239 0.4221 MGSNDKNEVKFNSPDIIGVLTGVRSERELERNGNMTKLNVIELEAGRYVDDLNNFIASGDIHNAIVIIQLAKAKTFQDKIHVQNCLGCTKVIYKPTCNDVVAMRNRLPDTVDTPSPLGLTQLQPEAKLDPREEFLFGTPRTTMQGLKDATTNFVFVVLGTIKRIVNRENFWYTACVCSKAVIPDSQMLYCEKCDRHVKKVFSRYCLRVRAIDHTDCATLVIFDKEATALLNKSCVDMLAEHGVAISEGHLPPERAGIIGKTFLFKVETKADQSPRFKLSLYVSCRILSMSSRRNGGKKKPHSSKTQCLISKCLLDKRKTLMIAGSSNVLTQDDISLSEPVEKFKARVLGECSGVVTQDLLPKFAMEECNSDVVEISHTCSSSSSKRVSPTQDEDDMNIPLKMLKRTVKIEKP 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03228 412 CDD RPA1_DBD_C 154 269 IPR047192 -
Mepo1g03228 412 Gene3D - 137 289 IPR012340 -
Mepo1g03228 412 SUPERFAMILY Nucleic acid-binding proteins 150 271 IPR012340 -
Mepo1g03228 412 Pfam Replication factor-A C terminal domain 156 240 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03228 Mepo-Chr1 37086759 37089740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03228 168 238 Core DNA Replication Machinery Family AT5G45400 34.177 2.63e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03228 - - mtr:25502892 567.77