Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03204 ATGCAGATGAGTGACAACAGCTTATCTGAAGAAGCTCATAAAACAGATCAAAGTTGTGCAAATGATCATACAGAAAATGGTGATACTAAACAAGTGAACAATCAAGAAGCAATAGATGGTTTCACAGATCAAAACAATGCAAAGAAAACTACAAATAAACCAACATCATCACCAAGACCACAAAAGTTAGAATCACTTATGAGAAATTTCTCTGAATTTTCCACAACTCCAAGACCAAGTCCAAGAATGATTTCAAGGAGTGGACCGAATTCACGTAGTGGTAGTCTAGAAAGCACAAGTGCACCAATATTTAAGCCTCATACAGGAGATGATGTGAGGTGGGATGCAATCAACATGATTTCAAGAGGGTCAAATTCAAATCTTAACTTTGGTCATTTTCGGCTTTTGAAGCGTGTTGGTTACGGTGACATTGGAAGTGTGTATCTTGTTGAACTTAAAGGGACAGGAACATTCTATGCTATGAAATTAATGGATAAGGCTTCACTTGCTAGCAGAAACAAGCTTCTTAGAGCACATACTGAAAGGGAGATTCTTGGACTTCTTGATCACCCTTTCTTGCCAACTTTGTATTCTTATTTTGAAAATGAGAAGTATTACTGTTTGGTCATGGAGTTTTGTAGTTGTGGTAGTTTGCATAACCTCAGAATGAAGCAACCCAACAAGCATTTCACTGAAAATGCTGCAAGGTTTTATTGTTCAGAGATTCTATTAGCAATGGAATACCTCCACATGTTAGGAATAGTATACAGAGACTTAAAACCAGAAAACGTCCTAGTCCGAGACAATGGCCACATAATGCTATCAGATTTCGACTTATCCCTTCGTTGTTCCGTTAGCCCCACCCTCGTCAAATCCTCCTCCGCACACATAACCACCACCACCACATCCATTGGAATCCTGGACAACGAACATGCAGTACAGGGCTGCATGCAACCATCAAATTTCTTCTTCCCAAGAATCCTCCCATACAAAAGAAACCGAAAATCAAAATCAGATTTCGGTCTCATGGTAGGTGGCCGTCTTCCAGAATTAATGGCAGAACCAACTAACGTCCGATCAATGTCATTCGTTGGGACACATGAGTATCTTGCTCCAGAAATCGTGCGTGGAGAAGGACACGGTAGTGCTGTTGATTGGTGGACATTTGGCATATTTTTATACGAGCTTATATACGGAACAACCCCGTTTAAAGGTAATGGAAACCGCGCTACGCTTTTTAATGTTGTAGGACAGCCTTTAAGGTTTCCTGACCATCCTTCCGCGAGTCCGGTAGCTAGGGATCTTATTAGAGGGTTGCTGGTTAAAGAACCTCATAAGAGAATTGCTTATAAAAGAGGTGCTACTGAGATTAAACAACATCCATTTTTCGAAGGTGTAAATTGGGCTTTGATTCGAAGTTCTACTCCTCCGATTATACCCGAACCGTTTGATTTTAGTCAGTATGTTAGTAAGGAAATTGTAGTGGCTGCTGCTGATAATAAGAAGATTGTTGATATTGTTAGTGATAAAAATAGTAAGATGCAGCATGATTCTTCTTATGAAGATTTTGAGTATTTTTAG 1581 0.396 MQMSDNSLSEEAHKTDQSCANDHTENGDTKQVNNQEAIDGFTDQNNAKKTTNKPTSSPRPQKLESLMRNFSEFSTTPRPSPRMISRSGPNSRSGSLESTSAPIFKPHTGDDVRWDAINMISRGSNSNLNFGHFRLLKRVGYGDIGSVYLVELKGTGTFYAMKLMDKASLASRNKLLRAHTEREILGLLDHPFLPTLYSYFENEKYYCLVMEFCSCGSLHNLRMKQPNKHFTENAARFYCSEILLAMEYLHMLGIVYRDLKPENVLVRDNGHIMLSDFDLSLRCSVSPTLVKSSSAHITTTTTSIGILDNEHAVQGCMQPSNFFFPRILPYKRNRKSKSDFGLMVGGRLPELMAEPTNVRSMSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELIYGTTPFKGNGNRATLFNVVGQPLRFPDHPSASPVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALIRSSTPPIIPEPFDFSQYVSKEIVVAAADNKKIVDIVSDKNSKMQHDSSYEDFEYF 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03204 526 ProSiteProfiles Protein kinase domain profile. 133 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03204 526 Gene3D Phosphorylase Kinase; domain 1 132 216 - -
Mepo1g03204 526 Gene3D Transferase(Phosphotransferase) domain 1 339 481 - -
Mepo1g03204 526 FunFam Serine/threonine-protein kinase AGC1-7 356 481 - -
Mepo1g03204 526 Pfam Protein kinase domain 357 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03204 526 Pfam Protein kinase domain 134 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03204 526 SMART serkin_6 133 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03204 526 MobiDBLite consensus disorder prediction 1 104 - -
Mepo1g03204 526 PANTHER FLIPPASE KINASE 1-RELATED 23 488 - -
Mepo1g03204 526 MobiDBLite consensus disorder prediction 9 23 - -
Mepo1g03204 526 SUPERFAMILY Protein kinase-like (PK-like) 130 494 IPR011009 -
Mepo1g03204 526 CDD STKc_phototropin_like 132 482 - -
Mepo1g03204 526 MobiDBLite consensus disorder prediction 24 102 - -
Mepo1g03204 526 FunFam serine/threonine-protein kinase D6PK-like 217 284 - -
Mepo1g03204 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Mepo1g03204 526 Gene3D Transferase(Phosphotransferase) domain 1 217 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03204 Mepo-Chr1 36791746 36793538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03204 96 526 AGC Kinase Gene Family AT1G79250 69.316 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mepo1g03204 Pkinase 6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03204 - - gmx:100802478 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03204 1 36791746 36793538 Mepo1g03204 1 36791746 36793538 ECH
Mepo6g02504 6 34133130 34135522 Mepo1g03204 1 36791746 36793538 PCT