Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03182 ATGGAAAGAATGTTCCCTCCAAAGAAGCCCTCAACTATGATGAATTCTCATGATAGACCCATGTGTGTTCAAGGTGACTCTGGTCTTGTCCTCACCACTGATCCAAAACCTCGGCTTCGATGGACCGTCGAACTCCATGAACGCTTTGTTGATGCTGTTGCTCAGCTTGGAGGACCTGATAAAGCCACTCCAAAAACAATCATGAGGGTTATGGGTGTGAAGGGTCTTACCCTTTACCACCTTAAGAGTCATCTTCAGAAATTTAGGCTTGGAAAGCAACCCCACAAGGAATTCAATGAGCAATCTATTAAGGATGGTATGAGAGTTTCGGCTTTTGAACTGCAAAGAAATACTGGCACCTCGTCTTCTATGACTGGTCGTAACATGAATGAGATGCAAATGGAGGTGCACAGAAGACTGCATGAACAGCTAGAGGTTCAAAAGCACCTTCAATTGAGGATTGAGGCTCAAGGAAAATACATGCAAAGCATATTGGAGAAAGCTTATCACACACTTGCAGGTGAAAACATGGCAGCTGCAGCTACAAATTTCAAGGGTATGAATGGAACTCAAGGCATCCCAGCTGACATGAAAGATTTTGTTTCTCCTCTAAATAATTTTCCTCATTTTCAAGATCTTAACATTTGTGGTAGTGATGACGAACAACTTGATCTTCATCACAACATAGAGAGGCCAACCCTTGATGGAATTATAATGCGTAATAATAATAATAATAATGAAAATTTGTTTGTTGGAAAGAAAAGGACTAACCCTTTTAATGAAAGTGGAAAGAGTCCAATAATTTGGAATGATAATGATCTTAGGCTTCATGATTTGGGAACAGCTTCATCATCATGCATTAGTCCTGAAGATGTTCCTAATTTCAAAGGTGACTCATTGGATAGATGTGATGAAAGTGATTCTATTGTTGATATTTATGACACAAAAGTGAGTGAGAAGAAATTTGATGCATCTGTGAAGCTTGGAATAACATTACCTATGATCAATGCTGTGGCAGCTGGTAGAACCTCATCACCATTTGGTTAA 1047 0.3964 MERMFPPKKPSTMMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNEQSIKDGMRVSAFELQRNTGTSSSMTGRNMNEMQMEVHRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYHTLAGENMAAAATNFKGMNGTQGIPADMKDFVSPLNNFPHFQDLNICGSDDEQLDLHHNIERPTLDGIIMRNNNNNNENLFVGKKRTNPFNESGKSPIIWNDNDLRLHDLGTASSSCISPEDVPNFKGDSLDRCDESDSIVDIYDTKVSEKKFDASVKLGITLPMINAVAAGRTSSPFG 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03182 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 93 IPR017930 -
Mepo1g03182 348 MobiDBLite consensus disorder prediction 1 20 - -
Mepo1g03182 348 NCBIfam myb-like DNA-binding domain, SHAQKYF class 36 91 IPR006447 GO:0003677
Mepo1g03182 348 Gene3D - 35 93 - -
Mepo1g03182 348 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 220 IPR044848 GO:0003700
Mepo1g03182 348 Pfam MYB-CC type transfactor, LHEQLE motif 132 170 IPR025756 -
Mepo1g03182 348 FunFam Myb family transcription factor 35 93 - -
Mepo1g03182 348 Pfam Myb-like DNA-binding domain 39 87 IPR001005 -
Mepo1g03182 348 SUPERFAMILY Homeodomain-like 35 91 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03182 Mepo-Chr1 36491685 36494315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03182 4 316 G2-like Transcription Factor Family AT1G79430 58.696 1.23e-113 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo1g03182 Myb_DNA-binding 4.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03182 - - lja:Lj3g3v0948270.2 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03182 1 36491685 36494315 Mepo1g03182 1 36491685 36494315 ECH
Mepo6g02567 6 35288820 35291373 Mepo1g03182 1 36491685 36494315 PCT