Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03169 ATGAAGGAAATACAAAATTCCTACGTATCTGTTGTTGTTTTCTCAAAAAACTATGCATCCTCAACGTGGTGCTTAGACGAGCTTACACACATGATGAAGTGTTTGAAACAGAACCAGATCGTTGTTGTACCTGTTTTCTATAACGTTGATCCTTCCCACGTGCGGAAGCAGAGTGGTAGTTATATGATTGCTTTTGAGAAGCATGTGTGTAATCTCAACCACTTTAATAAGGTCAATGATTGGCGTGAAGCTTTAACACAAGCAACTAGTTTGGCTGGATGGGACTCTCGTAAATACATGCTTGAATCAGAACTCGTGGAAGACATTGTCCAAGACGTTTTGCAAAAACTTCACTGTAAATATCCAAGCGAATCGAAGGGTCTTGTTGGAATTGAAAAACACTATGCACATCTTGAATCATTCATGAGAATAGGGTCAAAAGAAGTTGGAATGATTGGAATATGGGGGATGGGCGGCATTGGTAAGACAACCATTGCTGCAGCTATATTTGACCATTTCTCTTCCCAATTTGAAGGATGTTGTTTCTTGGAAAATATAGGAGATGAATCAGATAGGCATGGATTGAATTTTTTGCATAACAAACTTCTAACAAAGCTACTGGAAGAAAATGAACATCTCCATGTTGGCACAGTCAGAATAGGTTTCAACTATAGTAAGAGCAGGCTTAGTCATAAAAAAGTTCTCATTGTGCTTGACGATGTAAGAACTCCAGAGCAACTAGATTTTCTAGTTGGAGCACATACCTTCTTGGGACCGGGGAGTAGAGTCATTGTTACAGCTAGAGATAAGCACGCGCTTATTGAACGAGCTCATGAAATATATGAGGTGAAGCCATTAAACTTTCATGAATCTCTTCAGCTTTTCAGTTTAAGTGCTTTCAAGAAAGTGTGTCCAGATATTAGCTATCAGCAGCTATCGGAAAGTGTGGTTAATTATGCAGGTGGCATTCCATTGCCTTTGAAAGTTTTAGGCTCATTATTTTCTTACAAGAGTAAAGAAATATGGCAAAGTACAATGACTAAACTAAAGAAAATTCCCTGTAGGGAAATTCAGAATATCTTAAGACTGAGCTATGATGGGTTAGATGATACCGAGAAAGAAATATTTCTAGACATTGCCTGCTTTCTGAATGGAAAGGATAGACAACATGTGACAAGACTTCTAGATGCTTGTGGTTTCTACGCAGTTCCTGGTTTAGAAACCCTTTTGGAAAAAGCTCTAATTACTTTTTCAAATAATAATCAAGTACAAATGCATGCCTTGATACAAGAAATGGGCCGGGAAATTGTTCGTCAAGAATCTACTAAAGACCCTGGTAGACGCAGTCGATTGTACGATCACAAAGAAGTATATGATGTGCTGAAGAATAACATGGGAACCAGTGCAATTGAAGGCATTAGCTTAGATGTGTCCCAAATCAAAGATATGAATTTGAGCTCTGACATTTTTGTGAAGATGATCAACCTAAGATTTCTCAAATTCTACTCTCGGTCGGGTGAGAGAAGTAGTATCTCCCTTCCTGCTGGTCTTGAATCATTTTCTAATAAGTTAAGGTACCTCCATTGGAGTGCATATCCTTTAAAGTCTCTACCATCAGCTTTTTCTCCTGAGAAACTTGTTGAGCTTTACATGCCAAACAGCCGCGTTAAAAGATTATGGGAAGGAGTGCAGGATCTTACTAATTTAAAGGAAATGGACCTCAGCTGTTGTGAGAACTTGATAGAGCTTCCAGATTTCTCCATGGCATTGAATCTCCAAACCGTTAACCTCTCTAGATGTGTAAGGCTGCGTCATGTACACGCATCTATTTTATCTCTCCAAAAACTTGTCAATTTAAACCTGGTTTGGTGTAAACAGCTTAAGAGCCTCCTAACCAATACCCCTTTAAATTCTCTGAGAATTCTCGAGCTCTACGGCTGCTCAAGTCTCAAGGAATTTTCGGTGACATCTGAAGAAATGACCTACTTGGATTTAAGATGTACTGCTATCAATGAATTGCCTCCATCAGTTAAGTACCTAGGTAGTCTTATGAACTTGGAGCTGAGTAGCTGTGTGCGCCTTAGAAATCTTCCAAATGAGTTCTCATGCCTGAAATCTCTTGGCCGTCTGGTACTTTCTGATTGCACGCTACTTGACACATCGAATCTGCATCTTCTATTTGATGGCCTGCGTTCTTTAGGATACCTTTGTCTCGACAACTGTTGTAACCTAATTGAACTCCCTCATAATATTAGTCTGTTATCATCATTGTATTATTTATCACTCAGTGGAAGCAATGTGAAGAACATTCCTAAAAGCATTAAGCATCTTTCACAGCTAGAATCTCTGGACTTGTGCAAATGCATGAGCATTCAGTATCTACCGGAACTCCCACCATCCATTGAAGTGTTGGATGTCACCAACTGCACGTCCTTGGAGACCGTCTTCACCTGTCCTGCTATTGATGAACTACTACAAGAGCACAAGGTATTCATTTCCTTCAAAAATTGTGTAGAATTGAATGAATACTCCCGCAATGGTATTATGTTAGATGCCCAAGTCAGACTAAAAGAGGCGGCCTATGTTGATGTATCAGCAAAAATAGAAGGGAGTGAGAGTGACCCCTGTTTCTTTTTTAAATCAGAGGCGACGTCGTCTTATCATCATCCACCAACTGTTATTTGCCCTGGAAGTAGAGTTCCTGACTGGTTTCACTATCGGTCAACTAAAGCATCGATAACCATTGAACTTTCAGTCTCACATTCTCCACAATCCAACATATTTGGTTTCATTTTCTGCCTCATTCTTCCTCAATCATTACCAAATGAAAAGAATCTCAATTGGAAAATCGGATGTGAATGCTACATGGAAGGTGGTGAAAACATCAGAAACACAAGTATGTGCTCTTTTGCTACAGGATTGGTTTCAGATCATGTGTACCTATGGTATGATGAAAACTTTTGTTTTGACATGTTTAACACAACTGGAAAAAGCAGAACCAATGACGACTATAGTGCTTATAAACCAAAGCTTTCATTTCAATTCTTTGTTGAAACCGAGGATAAATTGAATGTGGTGATTAAAGAGTGTGGGATCTGCCAAATCTATAGTTCAGAATATCTTAGTTTTGTTGAACAATTAGGGTTTGAGTTGGAGTTGGGAAATCAAGCAAAAAGATGTAGGGATATTTATGAGTTAGAATCAAGTGAAACAAGAACCCAAGTTGAAGGCTGTTTTGAGAATGAAGATGAACAAAAAGATACATTGCATCAAACAAAGAAACAGAAGGTACTATTTTTCACTCATTTCAACATTGGAGGAAAATATTTGGAATAA 3336 0.3867 MKEIQNSYVSVVVFSKNYASSTWCLDELTHMMKCLKQNQIVVVPVFYNVDPSHVRKQSGSYMIAFEKHVCNLNHFNKVNDWREALTQATSLAGWDSRKYMLESELVEDIVQDVLQKLHCKYPSESKGLVGIEKHYAHLESFMRIGSKEVGMIGIWGMGGIGKTTIAAAIFDHFSSQFEGCCFLENIGDESDRHGLNFLHNKLLTKLLEENEHLHVGTVRIGFNYSKSRLSHKKVLIVLDDVRTPEQLDFLVGAHTFLGPGSRVIVTARDKHALIERAHEIYEVKPLNFHESLQLFSLSAFKKVCPDISYQQLSESVVNYAGGIPLPLKVLGSLFSYKSKEIWQSTMTKLKKIPCREIQNILRLSYDGLDDTEKEIFLDIACFLNGKDRQHVTRLLDACGFYAVPGLETLLEKALITFSNNNQVQMHALIQEMGREIVRQESTKDPGRRSRLYDHKEVYDVLKNNMGTSAIEGISLDVSQIKDMNLSSDIFVKMINLRFLKFYSRSGERSSISLPAGLESFSNKLRYLHWSAYPLKSLPSAFSPEKLVELYMPNSRVKRLWEGVQDLTNLKEMDLSCCENLIELPDFSMALNLQTVNLSRCVRLRHVHASILSLQKLVNLNLVWCKQLKSLLTNTPLNSLRILELYGCSSLKEFSVTSEEMTYLDLRCTAINELPPSVKYLGSLMNLELSSCVRLRNLPNEFSCLKSLGRLVLSDCTLLDTSNLHLLFDGLRSLGYLCLDNCCNLIELPHNISLLSSLYYLSLSGSNVKNIPKSIKHLSQLESLDLCKCMSIQYLPELPPSIEVLDVTNCTSLETVFTCPAIDELLQEHKVFISFKNCVELNEYSRNGIMLDAQVRLKEAAYVDVSAKIEGSESDPCFFFKSEATSSYHHPPTVICPGSRVPDWFHYRSTKASITIELSVSHSPQSNIFGFIFCLILPQSLPNEKNLNWKIGCECYMEGGENIRNTSMCSFATGLVSDHVYLWYDENFCFDMFNTTGKSRTNDDYSAYKPKLSFQFFVETEDKLNVVIKECGICQIYSSEYLSFVEQLGFELELGNQAKRCRDIYELESSETRTQVEGCFENEDEQKDTLHQTKKQKVLFFTHFNIGGKYLE 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03169 1111 Pfam TIR domain 2 129 IPR000157 GO:0007165
Mepo1g03169 1111 Gene3D - 1 113 IPR035897 -
Mepo1g03169 1111 Gene3D Ribonuclease Inhibitor 418 658 IPR032675 -
Mepo1g03169 1111 Gene3D Ribonuclease Inhibitor 659 843 IPR032675 -
Mepo1g03169 1111 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 94 IPR035897 -
Mepo1g03169 1111 SMART till_3 1 91 IPR000157 GO:0007165
Mepo1g03169 1111 Pfam NB-ARC domain 146 364 IPR002182 GO:0043531
Mepo1g03169 1111 Pfam Leucine Rich Repeat 545 564 IPR011713 -
Mepo1g03169 1111 PRINTS Disease resistance protein signature 564 580 - -
Mepo1g03169 1111 PRINTS Disease resistance protein signature 151 166 - -
Mepo1g03169 1111 PRINTS Disease resistance protein signature 320 334 - -
Mepo1g03169 1111 PRINTS Disease resistance protein signature 228 242 - -
Mepo1g03169 1111 FunFam Disease resistance protein RPS4 467 658 - -
Mepo1g03169 1111 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 379 IPR027417 -
Mepo1g03169 1111 ProSiteProfiles TIR domain profile. 1 117 IPR000157 GO:0007165
Mepo1g03169 1111 Pfam C-JID domain 895 1039 IPR045344 -
Mepo1g03169 1111 Gene3D - 114 280 IPR027417 -
Mepo1g03169 1111 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 654 IPR044974 GO:0006952
Mepo1g03169 1111 SUPERFAMILY L domain-like 425 817 - -
Mepo1g03169 1111 Gene3D - 286 369 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03169 Mepo-Chr1 36330092 36334532 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03169 20 783 WRKY Transcription Factor Family AT4G12020 35.513 1.43e-123 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03169 - - mtr:25479456 2108.95