Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03146 ATGTCGGTAATATTTTTTGTTTCATACAGTGGTTACATGTCTCCTGAGTATGCGATGGAAGGAGTCTTTTCTACAAAGTCTGATGTATACAGCTTTGGAGTGCTGCTCCTTGAAATTATCAATGGTAAAAAAAACAATAGTTTCTACTCTGAAGACAGACCACTTAATCTAGTAGGACATGCATGGGAGCTATGGAAAGACGGCGTGGTTCTTGAGTTGGTGGATCCATTACTAACTGAGTCATTTTCTGAGGATGAGGTGCTAAGATGTGTTCATGCTGGTTTATTATGCGTAGAAGAAAATGCAGATGATCGCCCCACCATGTCCAATGTTATAGCAATGTTAACTAACAAGATTAAAGTCGATGTTTTGCCTAAGAAACCAGCATACTATGGTAGAACAAGAGTTTTTGAGGAAGAAACATATGGCGAAGAAGTTGGTGTGGATTCCACTTATGAAAACTCTTATTCACATGAGCAAAATATAGATAGATCCAGTGAACAAAATACAAAATTTATCGATTAA 525 0.3733 MSVIFFVSYSGYMSPEYAMEGVFSTKSDVYSFGVLLLEIINGKKNNSFYSEDRPLNLVGHAWELWKDGVVLELVDPLLTESFSEDEVLRCVHAGLLCVEENADDRPTMSNVIAMLTNKIKVDVLPKKPAYYGRTRVFEEETYGEEVGVDSTYENSYSHEQNIDRSSEQNTKFID 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03146 174 Pfam Protein tyrosine and serine/threonine kinase 12 113 IPR001245 GO:0004672|GO:0006468
Mepo1g03146 174 Gene3D Transferase(Phosphotransferase) domain 1 5 133 - -
Mepo1g03146 174 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 2 120 - -
Mepo1g03146 174 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 11 163 - -
Mepo1g03146 174 MobiDBLite consensus disorder prediction 153 174 - -
Mepo1g03146 174 SUPERFAMILY Protein kinase-like (PK-like) 8 135 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03146 Mepo-Chr1 35753803 35754414 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03146 11 166 Receptor kinase-like Gene Family AT4G11480 49.367 1.97e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g03146 PK_Tyr_Ser-Thr 4.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03146 - - vra:106778432 230.335