Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03124 ATGGACAATGCATCAACCATTAAACGGGATGTGACTTATGGTTACAGTGATTGCAAGAATAGATGTTGGAGAAATTGTAATTGCAATGGATTCCAAGAATTTTATCGTAATGGGACTGGATGTATATTCTATTCATGGAATTCGACACAAGATGTTGATTTGGTGAGTCAGGATAACTTTTACGCCTTGGTAAACTCTGCAAAATCAGCCCCAAATTCCCATGGTAAGAAAAAGTGGATATGGATATGTTCTGCAATCGCAATTGCTTTACTGATATTATGCCCACTCATTGTATGGCTAGCCAAAAAGAAACAAAAATATGCACTACAAGATAGGAAAAGTAAAAGAAATAAGGGTAAGAGCAAAGGTTTGGCGGATTCTAATGAAACTTATGATATCAAAGATCTTGAAGATGACTTTAAGGGACATGATATAAAAGTTTTTAACTTTACATCAATTTTGGAAGCAACTATGGATTTTTCCCCTGAAAACAAGTTAGGGCAGGGAGGCTATGGACCGGTTTATAAGGGAATGTTGGCAACAGGTCAAGAAATTGCTGTAAAAAGGCTTTCAAAAACATCTGTACAAGGAATTGTGGAGTTTAAAAACGAATTGGTACTTATATGTGAACTTCAGCACACAAATCTTGTACAACTACTTGGTTGTTGCGTTCATGAAGAAGAAAGGATTCTAATTTACGAATATATGCCAAACAAAAGCTTGGATTTCTATCTATTTGATTGTACAAAAAAGAAGTTGCTAGATTGGAAGAAGCGTTTCAACATAATAGAAGGAATTGCTCAAGGATTACTCTATCTTCATAAGTACTCAAGACTCAAAATTATTCATAGAGACTTGAAGGCTAGCAACATACTTCTTGATGAGAATATGAACCCAAAAATTTCTGATTTTGGTATGGCAAGAATGTTTACACAGAAGGAATCCATAGTAAATACCAACAGGATTGTTGGGACATAG 978 0.3507 MDNASTIKRDVTYGYSDCKNRCWRNCNCNGFQEFYRNGTGCIFYSWNSTQDVDLVSQDNFYALVNSAKSAPNSHGKKKWIWICSAIAIALLILCPLIVWLAKKKQKYALQDRKSKRNKGKSKGLADSNETYDIKDLEDDFKGHDIKVFNFTSILEATMDFSPENKLGQGGYGPVYKGMLATGQEIAVKRLSKTSVQGIVEFKNELVLICELQHTNLVQLLGCCVHEEERILIYEYMPNKSLDFYLFDCTKKKLLDWKKRFNIIEGIAQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARMFTQKESIVNTNRIVGT 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03124 325 ProSiteProfiles Protein kinase domain profile. 160 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03124 325 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 325 - -
Mepo1g03124 325 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Mepo1g03124 325 Gene3D Transferase(Phosphotransferase) domain 1 236 325 - -
Mepo1g03124 325 SUPERFAMILY Protein kinase-like (PK-like) 145 325 IPR011009 -
Mepo1g03124 325 Pfam PAN-like domain 12 44 IPR003609 -
Mepo1g03124 325 SMART serkin_6 160 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03124 325 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 126 235 - -
Mepo1g03124 325 Gene3D Phosphorylase Kinase; domain 1 120 235 - -
Mepo1g03124 325 Pfam Protein kinase domain 162 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03124 325 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 236 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03124 Mepo-Chr1 35430142 35433303 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03124 71 325 Receptor kinase-like Gene Family AT4G05200 49.421 5.79e-76 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g03124 Pkinase 9.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03124 - - mtr:11409308 529.25