Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03122 ATGGACAATGCAACGTTTGAACATGATGTGACTTATAGTTACAGTGATTGCAAGATGAGATGTTGGAGAAATTGTAATTGCAATGCATTCCAAGAATTATATGAAAATTTGACTGGATGTGTATTCTATTCATGGAATTCAACACAAGTTGTTAATTTGGAGGTTCGGGATACCTTTTACACCTTGGTAAAGCCAACAAAATCAGATCTGAATTCCCATGGTATAAAAAGGTGGATATGGATAGGTTCTGCGATCGCAATTGCTTTACTCATATTATGCCCACTCATTATATGGCTAGCCAAAAAGAAACAAAAATATGCATTTCAAGATAAGAAAAGTAAAAGAAAGGAAGGTAAGAGCAATGATTTGGTGGAATCATATGATATCAAAGATCTTGAAGATGACTTCAAGGGACATGATATAAAAGTTTTTAACTTTACATCAATTTTGGAAGCAACTATGGAATTTTCCCATGAAAACAAGTTAGGACAAGGAGGCTATGGACCAGTTTATAAGGGAATCTTGGCAACAGGGCAAGAAGTTGCTGTAAAAAGACTTTCAAAAACATCGGGACAAGGAATTGTGGAATTCAAAAATGAATTGGTACTTATATGTGAACTTCAGCACACAAATCTTGTACAACTACTTGGTTGTTGCATTCATGAAGAAGAAAGGATTCTAATTTACGAATATATGCCAAACAAAAGCTTGGATTTCTACCTATTTGATTGTACGAAAAAGAAGCTACTAGATTGGAAGAAGCGTTTCAACATAATAGAAGGAATTGGTCAAGGATTGCTCTATCTTCATAAGTACTCAAGACTCAAAATCATTCACAGAGACTTGAAAGCTAGCAACATACTTCTTGATGAGAATATGAACCCAAAAATTGCTGATTTTGGTATGGCAAGAATGTTTACACAGCAGGAGTCCGTAGTAAATACCAACAGAATTGTTGGGACATATGGATACATGTCTCCAGAATATGCCATGGAAGGAGTTTGTTCTACAAAGTCTGATGTCTATAGCTTTGGAGTGTTGCTGCTTGAAATTGTTTGTGGAAGAAAAAACAATAGCTTCTATGATGTTGATCGTCCACTAAATCTAATAGGACATGTATGTCAATTCATTCCATTAAGTTTTTTTTTAATAAATTATTCGTTGTTCCTAATTTGA 1176 0.3444 MDNATFEHDVTYSYSDCKMRCWRNCNCNAFQELYENLTGCVFYSWNSTQVVNLEVRDTFYTLVKPTKSDLNSHGIKRWIWIGSAIAIALLILCPLIIWLAKKKQKYAFQDKKSKRKEGKSNDLVESYDIKDLEDDFKGHDIKVFNFTSILEATMEFSHENKLGQGGYGPVYKGILATGQEVAVKRLSKTSGQGIVEFKNELVLICELQHTNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFDCTKKKLLDWKKRFNIIEGIGQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKIADFGMARMFTQQESVVNTNRIVGTYGYMSPEYAMEGVCSTKSDVYSFGVLLLEIVCGRKNNSFYDVDRPLNLIGHVCQFIPLSFFLINYSLFLI 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03122 391 FunFam Lectin-domain containing receptor kinase A4.3 232 379 - -
Mepo1g03122 391 SMART serkin_6 156 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03122 391 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 121 231 - -
Mepo1g03122 391 Pfam Protein tyrosine and serine/threonine kinase 158 355 IPR001245 GO:0004672|GO:0006468
Mepo1g03122 391 Gene3D Phosphorylase Kinase; domain 1 117 231 - -
Mepo1g03122 391 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 370 - -
Mepo1g03122 391 SUPERFAMILY Protein kinase-like (PK-like) 140 379 IPR011009 -
Mepo1g03122 391 Gene3D Transferase(Phosphotransferase) domain 1 232 378 - -
Mepo1g03122 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Mepo1g03122 391 ProSiteProfiles Protein kinase domain profile. 156 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03122 Mepo-Chr1 35409916 35415129 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03122 85 373 Receptor kinase-like Gene Family AT4G23230 53.979 9.53e-101 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g03122 PK_Tyr_Ser-Thr 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03122 - - mtr:11409308 632.484