Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03086 ATGAACCTACCAAGTTTTTGGCTATTGCTAAGTTTTCTAAATGGCAAGCAGGAACCTTGGCCAGAATTACTTGAACGGATCTCTACCTCCGGCAATTGGAAATCTGACTCGTCCATTGGCATCAATGCTTTATCAGGAAAGCTTCCAAAGGAATTGGGAGATCTAACTGAGTTGATTGTATTGGGTATTGGGACTAATAACTTTTCAGGATCTCTGCCATCTGAACTAGGGAAGCTGATAAAACTAGAACAACTCTACATGGATAGTTCTGGAATTAGTGGTCCAATTCCACCCACATTTGCAAGCCTTAAGAATATGGTGACAGTATGGGCTTCAGACAATGAACTCACAGGTAGAATACCCGACTTCATTGGAAATTGGTCTAAGCTACAATCCTTGAGGTTTCAGGGTAATTCTTTTGAAAGTCCAATTCCCTCATCATTGTCCAATTTGACTTCTTTGACAGACATAGACTTGAGATATAACAATATTTCTGGTTCAATTCCTTCCACCATAGGAGAATTTGAAAATTTGACTTATCTGTTTCTTGGAAATAACGCATTTAGCGGCACTCTCCCTCGGCAGAAAAGCTCATCTCTTATCAACATGAACACAGTTGCCAACAACTTGACAATAGAAAATTCAAATATCAGTGGTTTGCCTATTGGGCTTAACTGTCTTCAGAAAAGTTTTCCATGCAATCGTGGTGTTGGACGATATTCAGACTTTGCGATCAAGTGTGGTGGTCCCCAACTTAGAACTACAGATGGAATTGTGTATGAAAAAGACAATGATACACTTGGTCCTGCTACTTACTTTGTTACTGATGCAAATAGATGGGCCGTTAGTAATGTTGGATTATTTACCGGAAACAGCAATCCTCTGTTCCAAAGTATTGGCTCAAATGAGTTCAACGGTACTGTGAATTCGGAGCTTTTAGAACATTTGATCTGGACTTTACAACAAAGAGTTTTGTTACAAACTGCTCGTATCTCTGCATCATCATTAAGATATTATGGTCTGGGGCTAGAAAATGGTTTTTACAACATTACCCTCCAATTTGCGGAAACAACTATTCTGGATTCTCCAACATGGAAAAGCCTCGGGAGACGAATCTTTGATATTTATATCCAGGGAACTCGTGTTTTGAAGGATTTTGACATACAAAAAGAAGCTGGAGGTGTCTCTTACACTGCAGTTCAAAAACAATTTAGGTTTGAAGTTAAAGAAAACTATCTCGAGGTCCATCTTTTTTGGGCCGGAAAAGGGACTTGCTGCATACCCGGCCAAGGTACTTATGGGCCCTTGATTCAAGCCATCAGTGCTACCCCAGATTTTGTACCTTCTGTCAACAGTAAACCTCCCAGCAGTAAAAAGAATAGAGCAGGTCTAATCATTGGAGTTGTTGTGGGGGTTGGAGCTGTTTGCTTCCTAGCAGTTTCTTCCATTTTCTATATCCTTAGGAGAAGAAAACTCTATAATGACGATGATGACCTTGTAGGCATTGATACGATGCCAAATACTTTCAGCTATTATGAGTTAAAAAACGCTACAAGTGACTTCAATCGTGACAATAAACTTGGAGAGGGGGGTTTTGGACCTGTGTATAAGGGGACTCTTAATGATGGAAGATTTGTAGCTGTGAAACAATTATCTATAGGATCCCATCAAGGAAAGAGTCAGTTTATTGCTGAGATTGCTACTATATCCGCTGTTCAACACCGAAATCTTGTCAAATTATATGGATGTTGTATTGAAGGGAGTAAAAGACTTCTTGTCTACGAGTATTTAGAAAATAAGAGTCTTGATCAAGCATTGTTTGGAAATGTTTTATTCCTTAATTGGTCGACCCGTTATGATGTTTGTATGGGTGTTGCAAGAGGTTTGACATATTTACACGAGGAGTCGCGACTCCGGATTGTGCACCGTGATGTGAAAGCTAGTAATATTCTACTTGACTCTGAGCTTGTCCCAAAATTATCTGACTTTGGATTGGCCAAATTATATGATGATAAAAAAACGCATATCAGCACCCGTGTTGCAGGGACAATTGGGTATCTTGCACCGGAGTATGCCATGCGTGGACGCCTCACCGAGAAAGCGGATGTTTTTTCCTTTGGTGTTGTGGCTCTGGAGTTAGTTAGTGGGAGGCCAAATTCTGATCCAAGTTTGGAAGAAGATAAGATGTATCTTCTAGACTGGGCTTGGCAGCTTCATGAAAGTAACTGTATAAATGAACTGATAGATCCTAGACTATCAGAATTCAACATGGAAGAAGTTGAACGCCTTGTGGGTATAGGATTGTTGTGCACTCAGACATCACCAAATTTACGACCATCAATGTCACGTGTAGTGGCAATGCTTTTAGGAGATATTGAAGTGAGCACGGTAACATCAAGGCCCGAATACTGGACTGACTGGAAATTTGGCGACGTGAGCAGCGTCGTTACTGACACTTCAGCAGAGGGATTAGATACAAGTAATTACAATTCAACGGCAAGTACAAGCATAGTTAGTGGTACATATATTCGTTCACCAAATGATCCTTCTAAACCCATCCTTCATGACAATCTTAGAGATAATGGCTGGTAA 2592 0.4032 MNLPSFWLLLSFLNGKQEPWPELLERISTSGNWKSDSSIGINALSGKLPKELGDLTELIVLGIGTNNFSGSLPSELGKLIKLEQLYMDSSGISGPIPPTFASLKNMVTVWASDNELTGRIPDFIGNWSKLQSLRFQGNSFESPIPSSLSNLTSLTDIDLRYNNISGSIPSTIGEFENLTYLFLGNNAFSGTLPRQKSSSLINMNTVANNLTIENSNISGLPIGLNCLQKSFPCNRGVGRYSDFAIKCGGPQLRTTDGIVYEKDNDTLGPATYFVTDANRWAVSNVGLFTGNSNPLFQSIGSNEFNGTVNSELLEHLIWTLQQRVLLQTARISASSLRYYGLGLENGFYNITLQFAETTILDSPTWKSLGRRIFDIYIQGTRVLKDFDIQKEAGGVSYTAVQKQFRFEVKENYLEVHLFWAGKGTCCIPGQGTYGPLIQAISATPDFVPSVNSKPPSSKKNRAGLIIGVVVGVGAVCFLAVSSIFYILRRRKLYNDDDDLVGIDTMPNTFSYYELKNATSDFNRDNKLGEGGFGPVYKGTLNDGRFVAVKQLSIGSHQGKSQFIAEIATISAVQHRNLVKLYGCCIEGSKRLLVYEYLENKSLDQALFGNVLFLNWSTRYDVCMGVARGLTYLHEESRLRIVHRDVKASNILLDSELVPKLSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGRLTEKADVFSFGVVALELVSGRPNSDPSLEEDKMYLLDWAWQLHESNCINELIDPRLSEFNMEEVERLVGIGLLCTQTSPNLRPSMSRVVAMLLGDIEVSTVTSRPEYWTDWKFGDVSSVVTDTSAEGLDTSNYNSTASTSIVSGTYIRSPNDPSKPILHDNLRDNGW 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03086 863 CDD STKc_IRAK 527 788 - -
Mepo1g03086 863 Pfam Protein tyrosine and serine/threonine kinase 524 788 IPR001245 GO:0004672|GO:0006468
Mepo1g03086 863 FunFam Leucine-rich repeat receptor-like protein kinase 240 444 - -
Mepo1g03086 863 Gene3D Phosphorylase Kinase; domain 1 494 596 - -
Mepo1g03086 863 Gene3D Transferase(Phosphotransferase) domain 1 597 799 - -
Mepo1g03086 863 Pfam Leucine rich repeat 129 187 IPR001611 GO:0005515
Mepo1g03086 863 Gene3D Ribonuclease Inhibitor 14 237 IPR032675 -
Mepo1g03086 863 FunFam Putative LRR receptor-like serine/threonine-protein kinase 597 800 - -
Mepo1g03086 863 ProSiteProfiles Protein kinase domain profile. 521 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03086 863 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 37 815 - -
Mepo1g03086 863 Pfam Malectin domain 242 440 IPR021720 -
Mepo1g03086 863 SUPERFAMILY L domain-like 42 228 - -
Mepo1g03086 863 SUPERFAMILY Protein kinase-like (PK-like) 504 806 IPR011009 -
Mepo1g03086 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Mepo1g03086 863 Gene3D - 242 444 - -
Mepo1g03086 863 FunFam Leucine-rich repeat receptor-like protein kinase 490 596 - -
Mepo1g03086 863 FunFam Leucine-rich repeat receptor protein kinase EMS1 96 195 - -
Mepo1g03086 863 SMART serkin_6 521 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03086 Mepo-Chr1 34678817 34689951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03086 38 814 Receptor kinase-like Gene Family AT1G56120 58.019 0.0 959
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g03086 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03086 - - mtr:25502389 1358.97