Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03085 ATGAGACAGTGTATTTTGGGTTCTTCATTTGGTATTGTTCTTTGTGTCTTCATCTGTTTGCTTAACTTTGCAAAAGCTCAAACTGCAAACGCTACTACAGATCCTTCTGAAGCAAGAGTTGTACACTCAATCTTTAGCAAATGGGGAAAATCAGCAGACCAAACTCAATGGAACATAAGTGGCGAAATATGCAGTGGAAGAGCCATTGATAGCAGTACAACCATTGATGACACCAATTTCAACCCATTCATCAAATGTGATTGTTCCTTTAACAACAAAACTACATGCCGCATCACTGCATTGAAAGTTTATGCATTGGATGTGATTAGTGAAATTCCACCTGAGCTATGGACTCTTACTCGCCTCACCAATTTGAACCTTGGCCAAAATTACTTGACGGGGTCTCTACCTCCGGCAATTGGAAATCTGACTCGTATGCAATACATGTCCATTGGCATAAATGCTTTGTCAGGAGAGCTTCCAAAGGAACTGGGAGATCTTACAGAGTTGATAGTATTGGGTTTTGGGTCCAATAACTTCTCAGGATCTTTGCCATCTGAACTTGGGAAGCTGGTAAAACTAGAACAACTCTACATGGATAGTTCTGGAATCAGTGGTCCAATTCCACCCACATTTGCAAGCCTTACGAATATGGTGACAGTATGGGCTTCAGACACAGAACTTACAGGAAGAATACCTGACTTCATAGGAAATTGGTCTAAGCTTCAATCCTTGAGGTTTCAGGGTAATTCATTTGAAGGTCCAATACCCTCATCATTATCCAATCTGACTTCTTTGACAGAGTTGAGAATAAGTGGTCTATCTAATAGGAGCTCGTCATTGGAATTTGTAAGGAATATGAAGTCTATGACTATCTTAGAATTGAGGAATAACAATATTTCTAGTTCATTTCCTTCCGCCATAGGAGAACTTCAAAATTTGACCCTTCTGGACTTGAGTTTCAACAACATCTCAGGACAAATTCCTGCATCAATTTTCAATTTGAGTTCACTCTCTTCCTTGTTTCTTGGAAATAACACACTTAGTGGTAGTCTCCCTCAACAGAAAAGATCATCTCTTAAAAACATCGACTTGTCATACAATGATCTATCAGGAAGCTTCCCCTCTTGGATAAACGAACAAAATTTACAATTGAACTTAGTAGCCAACAACTTGACAATAGAAAATTCAAATAGCAGTGGTTTACCTACTGGGCTCAACTGTCTTCAGAAAAATTTTCCATGCAATCGTGGTGCTGCAAGATATTCTGACTTTGCGATCAAGTGTGGTGGTCCCCAAATTAGAACTACAGATGGAATTGTGTATGAAACGGACAATGAGACACTTGGTCCTGCTACTTACTTTGTCACTGATACAAATAGATGGGCTGTTAGTAATGTTGGAACATTTACCGGGATCAGCAATCCTCTGTTCAAAAGTTTTGTTTCGAATCAGTTCACTGGTACTGTGAACTCAGAGCTTTTTCAATTTGCTCGGCTCTCTGCATCATCATTAAGATATTACGGTTTGGGATTGGAAAATGGTTTTTACAACATAACCCTCCAATTTGCGGAAACAGCTATTCTGGATTCCACCACATGGAAAAGCCTCGGGAGACGGGTCTTTGACATTTATATCCAGGGGACTCGTGTTTTGAAGGATTTTGACATACAAAAAGAAGCTGGAGGTGTCTCCTACAGAGCTGTTCAAAGACAATTTAGGTTTGAAGTTAAAGAAAATTATGTCGAGGTCCATCTTTTTTGGGCGGGAAAAGGAACTTGTTGCATACCTGGCCAAGGTACTTATGGACCCTTGATTCAAGCCATCAGTGCTACCCCAGATTTCATACCTACTGTCAGTAACAAACCTCCGAGCAGTAAAACGAATAGAGCAGGTCTAATCGTAGGAATTGTTGTTGGTGTTGGAGCTGTATGCTTTCTAGCAGTTTTTGCCATTTTCTACATCAACCGGAGAAGAAAACTCTACGATGATGATGAAGACCTTTTAGGCATTGATACAATGCCAAACACTTTCAGCTATTCTGAGTTGAAAAATGCTACAAGTGACTTCAATCGTGACAATAAACTTGGAGAGGGAGGTTTTGGACCTGTTTATAAGGGGATACTTAACGATGGAAGAGACGTTGCTGTGAAACAATTATCTATAGGATCCCATCAAGGAAAGAGTCAATTCGTAGCTGAGATTGCTACTATATCTGCTGTGCAACACCGTAATCTTGTCAAATTATACGGATGTTGTATTGAAGGGAGTAAAAGACTACTTGTCTACGAGTATTTAGAAAATAAGAGTCTTGATCAAGCATTGTTTGGAAATGTTTTATTCCTAAATTGGTCAACCCGCTATGATATATGTATGGGTGTTGCAAGAGGTTTGACATATTTGCATGAGGAGTCGCGGCTCCGGATTGTACATCGTGATGTGAAGGCTAGTAATATTCTACTCGATTCTGAGCTTGTCCCGAAAATATCTGACTTTGGATTGGCTAAATTATATGATGATAAAAAAACCCATATAAGCACCCGTGTTGCTGGAACAATTGGATATCTTGCACCGGAGTATGCCATGCGCGGACACCTTACAGAGAAAGCGGATGTTTTTTCCTTTGGTGTTGTGGCTCTGGAGTTAGTTAGTGGGAGGCCAAATTCTGATTCAACGTTGGAAGGAGAGAAGATGTATCTTCTAGAATGGGCTTGGCAGCTTCATGAAAGGAACTCTATAAATGAACTGATAGATCCTAGACTATCAGAATTCAACGAGGAAGAAGTCCAACGCCTTGTGGGAATTGCACTTTTGTGCACTCAGACATCACCAACTTTACGGCCATCGATGTCACGTGTAGTAGCAATGCTTTCAGGAGATATTGAAGTGGGCACTGTAACATCAAGGCCTGGATACTTGACTGACTGGAAATTTGACGACGTTAGCAGCATCATGACTGACGTTTCAGCGAAGGGACTAGATACAAGTAATTACAATTCAACAGCAAGTACAAGCATAGTTGGTGGTGCAGAGATTCTTTCACCAAATGATCCTTCTAAAGCCATCCTTCATGACACTCTTAGAGAGGGTAGGTAA 3096 0.4044 MRQCILGSSFGIVLCVFICLLNFAKAQTANATTDPSEARVVHSIFSKWGKSADQTQWNISGEICSGRAIDSSTTIDDTNFNPFIKCDCSFNNKTTCRITALKVYALDVISEIPPELWTLTRLTNLNLGQNYLTGSLPPAIGNLTRMQYMSIGINALSGELPKELGDLTELIVLGFGSNNFSGSLPSELGKLVKLEQLYMDSSGISGPIPPTFASLTNMVTVWASDTELTGRIPDFIGNWSKLQSLRFQGNSFEGPIPSSLSNLTSLTELRISGLSNRSSSLEFVRNMKSMTILELRNNNISSSFPSAIGELQNLTLLDLSFNNISGQIPASIFNLSSLSSLFLGNNTLSGSLPQQKRSSLKNIDLSYNDLSGSFPSWINEQNLQLNLVANNLTIENSNSSGLPTGLNCLQKNFPCNRGAARYSDFAIKCGGPQIRTTDGIVYETDNETLGPATYFVTDTNRWAVSNVGTFTGISNPLFKSFVSNQFTGTVNSELFQFARLSASSLRYYGLGLENGFYNITLQFAETAILDSTTWKSLGRRVFDIYIQGTRVLKDFDIQKEAGGVSYRAVQRQFRFEVKENYVEVHLFWAGKGTCCIPGQGTYGPLIQAISATPDFIPTVSNKPPSSKTNRAGLIVGIVVGVGAVCFLAVFAIFYINRRRKLYDDDEDLLGIDTMPNTFSYSELKNATSDFNRDNKLGEGGFGPVYKGILNDGRDVAVKQLSIGSHQGKSQFVAEIATISAVQHRNLVKLYGCCIEGSKRLLVYEYLENKSLDQALFGNVLFLNWSTRYDICMGVARGLTYLHEESRLRIVHRDVKASNILLDSELVPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALELVSGRPNSDSTLEGEKMYLLEWAWQLHERNSINELIDPRLSEFNEEEVQRLVGIALLCTQTSPTLRPSMSRVVAMLSGDIEVGTVTSRPGYLTDWKFDDVSSIMTDVSAKGLDTSNYNSTASTSIVGGAEILSPNDPSKAILHDTLREGR 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03085 1031 Pfam Malectin domain 424 609 IPR021720 -
Mepo1g03085 1031 FunFam Leucine-rich repeat receptor-like protein kinase 422 613 - -
Mepo1g03085 1031 FunFam Leucine-rich repeat transmembrane protein kinase 35 276 - -
Mepo1g03085 1031 Gene3D Transferase(Phosphotransferase) domain 1 766 965 - -
Mepo1g03085 1031 CDD STKc_IRAK 696 957 - -
Mepo1g03085 1031 SMART serkin_6 690 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03085 1031 Pfam Protein tyrosine and serine/threonine kinase 693 957 IPR001245 GO:0004672|GO:0006468
Mepo1g03085 1031 Pfam Leucine rich repeat 289 348 IPR001611 GO:0005515
Mepo1g03085 1031 FunFam Leucine-rich repeat receptor-like protein kinase 659 765 - -
Mepo1g03085 1031 FunFam Putative LRR receptor-like serine/threonine-protein kinase 277 400 - -
Mepo1g03085 1031 SUPERFAMILY Protein kinase-like (PK-like) 673 972 IPR011009 -
Mepo1g03085 1031 Gene3D Ribonuclease Inhibitor 277 404 IPR032675 -
Mepo1g03085 1031 Gene3D - 424 613 - -
Mepo1g03085 1031 Gene3D Phosphorylase Kinase; domain 1 663 765 - -
Mepo1g03085 1031 Gene3D Ribonuclease Inhibitor 34 276 IPR032675 -
Mepo1g03085 1031 ProSiteProfiles Protein kinase domain profile. 690 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03085 1031 SUPERFAMILY L domain-like 96 383 - -
Mepo1g03085 1031 SMART LRR_typ_2 167 191 IPR003591 -
Mepo1g03085 1031 SMART LRR_typ_2 311 335 IPR003591 -
Mepo1g03085 1031 SMART LRR_typ_2 287 310 IPR003591 -
Mepo1g03085 1031 SMART LRR_typ_2 119 143 IPR003591 -
Mepo1g03085 1031 FunFam Putative LRR receptor-like serine/threonine-protein kinase 766 969 - -
Mepo1g03085 1031 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 986 - -
Mepo1g03085 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03085 Mepo-Chr1 34628687 34641732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03085 103 277 Receptor kinase-like Gene Family AT1G56120 25.414 8.76e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g03085 PK_Tyr_Ser-Thr 8.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03085 - - mtr:25502389 1704.49