Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03084 ATGATGATAATGTTACCCCATTTTCTTTCTGTATTGTCTGGTGTCCTTTCTATTTTCGTTTTGATACAAGCTCAGGATCAATCAGGATTCATTAGCTTAGATTGTGGGCGACCTGAAGATGCGAGCTATTCTTCGTTTGAGACAGGCATAAGTTACATTTCAGATGCCAAATTCATCGTCGATAAAGGTGTAAGTAAGAGCATACAACCTACGAAAGAGTTTTCTCGACAGGAACTAGAGAATGTAAGGAGCTTTCCAAGTGGAGTGAGAAACTGTTACAAAATAAATGTAACAAGTGGAACTAAATATTTAATAAGAGCTTCTTTCTATTATGGAAACTATGATAATCTTGATGAACCACCACAATTTGATCTTCATTTTGGAGCTAATGTGTGGGATACAGTGAAGTTGTTCTCCAATGCATCACGCATCACAATCAAGGAGATCATTTACACTCCATCAGTAGATTACATACAACCATGTCTTGTTAACACAGGCAAAGGGACTCCATTCATTTCAGCCATAGAATTGAGGGCTATGAACAATACAGCTTATAGCACATACGAACCTAAATCAGTATTATCACTCTTCCAGCGATGCAATTTAGGTTCCACGACAGACATATACAGGTACAGAAAGGATGTTTATGACCGCAAGTGGATACCTTGTAAATTACCAAGTGTTTGTAGACAATTAAACACCTCCGTTAAGAATGTAATTCTACCAATTCCGAATATTTATGAACTACCAGCAATTGTGATGAGCACTGCTGTTACACCGGTAAATGCCAGTGCTCCATTAGAATTTCATTGGCATGCAGATAATGTAAATGACCAATTCCACTACTTTTTGCACTTTAATGAGGTTGAGAAACTGGCTGGAAATGAAACTAGAGACTCAAATATCACAATTAATGACGAGGTTTTGAAAGGACACTTTAATGAGTTTTTGGAAGTAAGAACCATTTATGGTGCAACACCTTTGACTGGAGCCACAAGGTATCAAATTTCTCTTTCTAGGACACAAAATTCAACCCTTCCACCCATCCTAAATGCCTATGAGATTTATATGGCAAAAGTCTTCTCACAATCAGAAACTCAACAGGAGGATGTTGATGCTATCACAAACATCAAGGATGCTTATGGGGTGGCAAGAAATTGGCAAGGAGATCCATGTGGTCCTGTGAATTATATGTGGGAAGGCCTAAACTGTAGTATTGATGGCTATAGCATCCCAAGAATCACATCTTTGAATTTATCTTCAAGTGGATTGACAGGGCATATATCATCTTGGATCTCAAATCTCACAATGTTACAACACTTAGATTTATCAAACAATAGTTTGAACGGTCCCTTACCTGATTTTCTGATTACACTGCTATCACTACAAGTCTTAAATGTGGGGAAGAACAAACTTAGAGGGTTTGTACCAAGGGAACTCCTTGAGAGACATAAAACAGGTTCACTATCATTGAGTGTAGATGATAATCCAGATCTTTGTATGACAGAATCCTGTGGAAAAAACGATTTTCTTGTAATACTTATTGCATTAGGTGTAATGGTTTCAATTTTTCTTGGAAGTTGGATATTCAGAACACAAAAAGTAGCTACGTGCTCAAATTCTAAGAAAAGGTGTTGGATGAAATCAAAGCATCAAACATTCAGTTACACTGAAATTCTCAATATTACTGATAACTTCAAAACCGTTATTGGAGAAGGAGGATTCGGAAAAGTTTACATGGGCATTTTACATGATCACACTCAAGTAGCTGTAAAAATGCTTTCAAAATCATCAAAGCAAGGTTATAAGGAATTTCAATCTGAGGCGCAACTTCTAATGATTGTTCATCATAGAAATTTGGTCTCTCTCATTGGGTATTGTGATGAAGATGAAAAAAAGGCCTTGATTTATGAATACATGGGCAATGGAAATGTTCAACAATACTTGTTAGATTATGCAGATGTCTTGAAATGGAATGAGAGACTCAAAATCGCAGTTGATGCGGCATATGGATTGGAATATCTGCATAATGGATGTAAACCAGCTATTATGCATAGAGATTTGAAGCCTACCAACATATTACTCGACGAGAATATGCAAGCCAAGATAGGTGATTTTGGCCTAAGTAGAGCTTTTGGTAACGATATTGATTCTCATATATCCACTCAACCTGCTGGTACACTAGGTTATGTTGATCCTGCATATCAGAGAACAGGAAACACAAATAAAAAAAATGATATCTACAGCTTTGGAATAATTCTATTTGTGTTGATCACTGGTCATCAAGCAATAATAAGAGCAGCTGGACAAAACATTCACATACTTGAATGGGTTATTCCTGTAATTGAAGAAGGAGATATTGAGAAACTTTTTGATCCAAAGTTGGAGGGTAATTTTAGCATCATTTCAGCACAAAAAGTTGTAGAGATTGCCATGTCATGCATTTCACCAAATGCAGCAGAAAGGCCAGACATGAGCCAAATATTGGCAGAACTGAGGGAGTGTCTATCTTTTGAAATGGTTCAGGGATGA 2532 0.3697 MMIMLPHFLSVLSGVLSIFVLIQAQDQSGFISLDCGRPEDASYSSFETGISYISDAKFIVDKGVSKSIQPTKEFSRQELENVRSFPSGVRNCYKINVTSGTKYLIRASFYYGNYDNLDEPPQFDLHFGANVWDTVKLFSNASRITIKEIIYTPSVDYIQPCLVNTGKGTPFISAIELRAMNNTAYSTYEPKSVLSLFQRCNLGSTTDIYRYRKDVYDRKWIPCKLPSVCRQLNTSVKNVILPIPNIYELPAIVMSTAVTPVNASAPLEFHWHADNVNDQFHYFLHFNEVEKLAGNETRDSNITINDEVLKGHFNEFLEVRTIYGATPLTGATRYQISLSRTQNSTLPPILNAYEIYMAKVFSQSETQQEDVDAITNIKDAYGVARNWQGDPCGPVNYMWEGLNCSIDGYSIPRITSLNLSSSGLTGHISSWISNLTMLQHLDLSNNSLNGPLPDFLITLLSLQVLNVGKNKLRGFVPRELLERHKTGSLSLSVDDNPDLCMTESCGKNDFLVILIALGVMVSIFLGSWIFRTQKVATCSNSKKRCWMKSKHQTFSYTEILNITDNFKTVIGEGGFGKVYMGILHDHTQVAVKMLSKSSKQGYKEFQSEAQLLMIVHHRNLVSLIGYCDEDEKKALIYEYMGNGNVQQYLLDYADVLKWNERLKIAVDAAYGLEYLHNGCKPAIMHRDLKPTNILLDENMQAKIGDFGLSRAFGNDIDSHISTQPAGTLGYVDPAYQRTGNTNKKNDIYSFGIILFVLITGHQAIIRAAGQNIHILEWVIPVIEEGDIEKLFDPKLEGNFSIISAQKVVEIAMSCISPNAAERPDMSQILAELRECLSFEMVQG 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03084 843 ProSitePatterns Protein kinases ATP-binding region signature. 570 592 IPR017441 GO:0005524
Mepo1g03084 843 CDD STKc_IRAK 570 832 - -
Mepo1g03084 843 FunFam Leucine-rich repeat receptor-like kinase 369 502 - -
Mepo1g03084 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 683 695 IPR008271 GO:0004672|GO:0006468
Mepo1g03084 843 Gene3D Phosphorylase Kinase; domain 1 536 639 - -
Mepo1g03084 843 PANTHER OS07G0107800 PROTEIN-RELATED 31 836 - -
Mepo1g03084 843 Pfam Malectin-like domain 33 357 IPR024788 -
Mepo1g03084 843 Gene3D Transferase(Phosphotransferase) domain 1 640 841 - -
Mepo1g03084 843 Gene3D Ribonuclease Inhibitor 371 497 IPR032675 -
Mepo1g03084 843 SMART serkin_6 564 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03084 843 FunFam Leucine-rich repeat receptor-like protein kinase 541 639 - -
Mepo1g03084 843 FunFam Lectin-domain containing receptor kinase A4.3 640 841 - -
Mepo1g03084 843 Pfam Protein tyrosine and serine/threonine kinase 566 832 IPR001245 GO:0004672|GO:0006468
Mepo1g03084 843 SUPERFAMILY Protein kinase-like (PK-like) 545 832 IPR011009 -
Mepo1g03084 843 SUPERFAMILY L domain-like 395 492 - -
Mepo1g03084 843 ProSiteProfiles Protein kinase domain profile. 564 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03084 Mepo-Chr1 34620365 34626291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03084 15 839 Receptor kinase-like Gene Family AT1G05700 46.005 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mepo1g03084 Malectin_like 9.8e-98 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03084 - - mtr:25500366 1217.22