Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03077 ATGGTTTTCACGAAAACGTCTGTAGATGCACCAGAGTATCTGATGATGACATCATGTGAATCAGATGTTTACAGTTATGGGATCCTTCTTGTGGAGATAGTTGGTGGGAGATATATCCAATCTATTGTAGAGCAAACATGGGATTATTATAAGCAAAAGAAATTGGTGGAGTTGGTAGACGTATCACTATACAAGGAGTTGTGTGCAGAGGAGGCTTGTAAATATCTGAAGATTTCCTTGCTTTGCATTCAGATTGATCCTAAGCTCCGGCCAACCATGTCTTCTGTGATAAAGATGCTCACCGGAGAAATAGATATTGACGAAAAAGCCACATTCAAACCATTTGATACCGGCATGCATTGTTTACCTCTTATATTTGGTAAGAAAGTGCCTTGTGGAGATGTTGAAGGGAATCAGATGAAAGTTTACACCTACAAAGAACTAAAAAAGGCCTCTAACAATTTCAGCCTTGATAATAAAATCAACCAGGGTGGTTTTGGTACGGTCTATAAGGGAGTGCTAAAAGATGGGAGGTTAGCTGCTATAAAAGTTCTATCACTTGAATTCCGTCTGCAGGCGGCCAAATTCTTGGCCGAGATTAGTGTAATTTCTGAAATCCAGCATGAAAATTTAGTTGAACTATATGGTTGTTGTGTCGAAGGAAATCACCGTATTTTGGTCTACAGTTACCTTGAGAACAGTAGCCTTGCACAAACCCTTCTAGGTGAAGGTGTCAGTAATATCAAATTTAATTGGCAAACACGGTATAGGATATGTATCGGAGTTGCACGTGGACTTGAATTTCTACATGAGCAAGAACAACCAAATAATGTTCACAAGGATATACGAGCAAGCAATATAGTCCTAGATAAAGACCTTAATCCGAAGATTTCAGATTTTGGTCTTACGAACCTTATTCGACCAGACATCACTCGTCTCTTCTCAGAGAGTCCGATGGCACCAGAGGACGTGTTTAGGCCGCTGACACGTAAATCAGATGTTTACAGATTTGGAATCATTCTGATGGAGATAGTCAATGGGAGATCTAACCGACATATTCTAGAACAAACATGGAAGCTTTATAACCGAAGGGAATTAGAAAAGTTGGTAGACACATCACTGGACTGGGGATGGTGTGTCGAGGAAGCTTGTAAATATCTGAAGATTGCCCTTCTTTGCACTCAGAGTTCGCCTAGGCTCCGACCAAACATGTCTGCTGTGCTCAAAATGCTCATTGGAGAAATTGATGTTGATGAAAGTAAGATAACAAGACCAGGCTTGATTATGGCCAATCAATTATATGATTACCCTGATTCTGAAATTGTTTGA 1329 0.4003 MVFTKTSVDAPEYLMMTSCESDVYSYGILLVEIVGGRYIQSIVEQTWDYYKQKKLVELVDVSLYKELCAEEACKYLKISLLCIQIDPKLRPTMSSVIKMLTGEIDIDEKATFKPFDTGMHCLPLIFGKKVPCGDVEGNQMKVYTYKELKKASNNFSLDNKINQGGFGTVYKGVLKDGRLAAIKVLSLEFRLQAAKFLAEISVISEIQHENLVELYGCCVEGNHRILVYSYLENSSLAQTLLGEGVSNIKFNWQTRYRICIGVARGLEFLHEQEQPNNVHKDIRASNIVLDKDLNPKISDFGLTNLIRPDITRLFSESPMAPEDVFRPLTRKSDVYRFGIILMEIVNGRSNRHILEQTWKLYNRRELEKLVDTSLDWGWCVEEACKYLKIALLCTQSSPRLRPNMSAVLKMLIGEIDVDESKITRPGLIMANQLYDYPDSEIV 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03077 442 Pfam Protein tyrosine and serine/threonine kinase 11 100 IPR001245 GO:0004672|GO:0006468
Mepo1g03077 442 Pfam Protein tyrosine and serine/threonine kinase 156 411 IPR001245 GO:0004672|GO:0006468
Mepo1g03077 442 ProSiteProfiles Protein kinase domain profile. 155 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03077 442 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 139 430 - -
Mepo1g03077 442 SUPERFAMILY Protein kinase-like (PK-like) 10 108 IPR011009 -
Mepo1g03077 442 FunFam Os07g0541700 protein 231 316 - -
Mepo1g03077 442 Gene3D Transferase(Phosphotransferase) domain 1 231 423 - -
Mepo1g03077 442 Gene3D Phosphorylase Kinase; domain 1 128 230 - -
Mepo1g03077 442 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 131 230 - -
Mepo1g03077 442 SUPERFAMILY Protein kinase-like (PK-like) 139 411 IPR011009 -
Mepo1g03077 442 Gene3D Transferase(Phosphotransferase) domain 1 6 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03077 Mepo-Chr1 34521522 34528360 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03077 142 428 Receptor kinase-like Gene Family AT1G56120 45.364 5.46e-79 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g03077 PK_Tyr_Ser-Thr 1.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03077 - - mtr:25502473 537.724