Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03076 ATGACTTGCTTTCCTTTCTTATTTGGTAAGAAAGTGTCTTCTGATGTAAGACGAGATCCTGAAATCGATCAAGGACTTTCCGGCATTCGAATAAAAGTTTATACCTACAAAGAACTAAAAATTGCCTCTGACAATTTCAGTCTGGCTAATAAAATCGGGGAGGGTGGTTTTGGTTCGGTTTATAAGGGAGTGCTAAAAGGTGGAAAGTTAGCCGCCATAAAAGTCCTTTCAACTGAATCGAAACAGGGGGTGAAGGAATTCTTGACCGAGATTAATGTGATTTCAGAAATAAAGCATGAAAATTTGGTTATACTATATGGTTGCTGTGTCGAAGGAGATCACAGAATATTAGTCTACAATTACCTCGAGAACAATAGTCTTTCACAAACCCTTCTAGCTGGAGGTCACAGTAATATCTACTTTGATTGGCTAACACGACGTAGGATATGCCTTGGAGTTGCACGTGGACTTGCCTTTCTCCACGAGGAAGTACTACCACATATTGTTCACAGGGATATAAAAGCAAGCAATATTCTCCTCGACAAAGATCTTACACCTAAGATTTCAGATTTCGGTCTTGCAAAGCTGATTCCATCATACATGACTCATGTCAGCACACGTGTAGCAGGAACAATAGGTTATTTGGCACCGGAGTATGCAATAAGAGGGCAGTTGACACGTAAAGCAGATATTTACAGTTTTGGGGTACTCCTTGTTGAGATAGTCAGTGGGAGGTCTAACACAAATACAAGATTACCAATTGCAGATCAATATATTCTTGAAACGACATGGCAACTTTATGAGCGAAGAGAATTGGCACAGTTGGTAGACATATCACTAAATGGCGAATTCGATGCTGAGGAGGCTTGTAAAATTCTGAAGATTGCCCTTCTTTGTACTCAGGATACTCCTAAGCTCCGGCCAACCATGTCTTCTGTGGTCAAAATGCTCACTGGAGAAATGGATATTAATGAAACTAAGATAACTAAACCAGGCTTGATTTCAGATGTCATGGACCTTAAAATTAGAGAACCTAAAAAAAATATAGATATGGGGACAGCTCCATCTTCATACAATGCTTCCTCTAGCTCAGATAGCCAGGGTACTACTACCATTTCATTGGCTGCTTCAAGTTCTGCAACAACTTCAAGTTTTACTGTAAAATATGATTAA 1173 0.3956 MTCFPFLFGKKVSSDVRRDPEIDQGLSGIRIKVYTYKELKIASDNFSLANKIGEGGFGSVYKGVLKGGKLAAIKVLSTESKQGVKEFLTEINVISEIKHENLVILYGCCVEGDHRILVYNYLENNSLSQTLLAGGHSNIYFDWLTRRRICLGVARGLAFLHEEVLPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPSYMTHVSTRVAGTIGYLAPEYAIRGQLTRKADIYSFGVLLVEIVSGRSNTNTRLPIADQYILETTWQLYERRELAQLVDISLNGEFDAEEACKILKIALLCTQDTPKLRPTMSSVVKMLTGEMDINETKITKPGLISDVMDLKIREPKKNIDMGTAPSSYNASSSSDSQGTTTISLAASSSATTSSFTVKYD 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03076 390 CDD STKc_IRAK 52 319 - -
Mepo1g03076 390 SMART serkin_6 46 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03076 390 FunFam cold-responsive protein kinase 1 122 333 - -
Mepo1g03076 390 MobiDBLite consensus disorder prediction 352 370 - -
Mepo1g03076 390 Pfam Protein kinase domain 48 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03076 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Mepo1g03076 390 Gene3D Phosphorylase Kinase; domain 1 17 121 - -
Mepo1g03076 390 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 361 - -
Mepo1g03076 390 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Mepo1g03076 390 FunFam cold-responsive protein kinase 1 17 121 - -
Mepo1g03076 390 Gene3D Transferase(Phosphotransferase) domain 1 122 331 - -
Mepo1g03076 390 SUPERFAMILY Protein kinase-like (PK-like) 27 317 IPR011009 -
Mepo1g03076 390 MobiDBLite consensus disorder prediction 346 370 - -
Mepo1g03076 390 ProSiteProfiles Protein kinase domain profile. 46 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03076 Mepo-Chr1 34514175 34518073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03076 17 336 Receptor kinase-like Gene Family AT1G56120 53.870 2.40e-113 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g03076 Pkinase 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03076 - - gmx:100797706 592.423