Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03075 ATGCTGAGAAATCTCCAAGAACACGATTCAAGTTACTCTGATTCTCTGTTTGTTCGCATCATAGCATGCGAATTATGCTGCAGTACTTGTAATTCAAGGCGCAAGAAATCCGAAAAAAAAATCAATGAAGGGAAACCGTTCGAAAATATGGAGTTTCTTGAGAAGCTTGGTGAAGGTGGTTTCGGTACAGTTTTCCGCTGCTGCGACGTTGAAACTAAACGAATCGTGGCTGTTAAACAAGTCTCTATTCATGACACTTATAATGCTGTTCCTGGTTCCATCATCAGAGAAGTCTCGTTTCTTAAAGAATTGAATCATCCTAACATTGTTAGGTTGTTGAATGTAACGTACAAGAAGGGAACAAGACTGGTTCACTTGGTTTTAGAGTATCTTGATTGTGATCTTCATGATTACATTATTGACGCGGAACGCTTCGATTCATCTATTAAAGATCCAATGACTAAAAAGAGTTTTCTGTATCAGATACTATCTGCGGTGGAGTACTGTCATTCTCGTAGGATTATTCACAGAGATTTGAAATCGACGAACCTTTTAATTGATCATTCTGAAAAGATAATCAAGTTGGCTGATTTTGGCTTGGCTAGAGAGTTGGGAGATCCTGACGTGTTATATTCGCCGAAGGTAGCAACTCGGTTGTATAGGGCACCTGAGATATTGTTTGAATGTGGTCAATATTCAACTCCAATTGATATTTGGTCTGTGGGCTGTATTTTTGGTGAGATGGTACTTGGACTACCAGTTCTCCGAGCAATTGATTGCAAGGATGAACTAGAGACGATTTTCAGATTGTTCGGTACCCCAACAGAGGAAACATGGCCAGGGGTCACTACTTTATGTGCTAACCTTCAAACCTATCCCAAATTTAGACCAATGGACCTGTCATCAATTTTTCCTGCTTTTGATCCAACTGGTCTTAATCTTCTAATGAGGATGCTTTGCCTGGACCCAAACAGGAGGATTTCTGCCGAATCTGCTCTTAGACATGCTTACTTTGATGACTTGGATCCGTCTGTCACAAAAAAAAGGCCGATGACCATGGAGGGTGGCAACAACATCACAGAAGAGTTTGTGACTACGATGGAAGGTGGTAGCTGCTCCACCAACAACAAAAGTGTAGAAGTGTTTGTGAGCACGATGGAGGATGGCAGCTCCACCGCCACCAACAACAATGAAGAAGTGTTTGCGGTGATGTTGGAGGATGGCAGCAGCACCACCAAGGTAGAAGAGATTGTGATGACAATAGATGGTGTCAGCAGCCCCACCACCGACAATAACAATGCAGAAAAGTTTGGGATGACGGTGGAGGATGGCACCACCACCACCACCAGTAGCGACAATGCAGAGGAGTTTTCAATGACGTTGGAGGGTGGCAGCAGCACCACGACCAACAACAATAACGCCGAAGCGTTTGCAGTGGGGTGTTTGCTGTTGATCAGGACAACATTTGGTGAAGAATTTGAAGCCCAAGTTGTTACGTTTGATCATCCCTCCAACATCCTTGGACTCATGGAAGGTTCCAAAGATGCCCCTCTTCGAAAAATTAGGCTTTTGAACGCTGATTACATCCAAGACTTTACCATTTTAGGTCAATATGAAGACCCACTTGATCCACGTAATTGCTACGTTGATCTCAATGATCTCCAAGCAAGAGAAGAACTTGCAATTAGACAAGCAGAGGCAGATGCTGAGAGGATTGGAGTTGGTGTTACAAGCGAAGCACAGAACATCTTTGATGCTTTATCTAAAACGCTTCCAGTCCGCTGGGACAAGAATGTCATAGTTGTGATGAATGAGGTGCGTATCAGCAGTCCTTATCACTCGGATTGTGTGATTGGCGGTGCTCCTGCTGCCAATGACCGGGTGAAGAAAGTGCTTGAGATGTTGAGGAAGCGTTTGCAACTTCCCTGTTCTGGTGGTCAGTAG 1944 0.4372 MLRNLQEHDSSYSDSLFVRIIACELCCSTCNSRRKKSEKKINEGKPFENMEFLEKLGEGGFGTVFRCCDVETKRIVAVKQVSIHDTYNAVPGSIIREVSFLKELNHPNIVRLLNVTYKKGTRLVHLVLEYLDCDLHDYIIDAERFDSSIKDPMTKKSFLYQILSAVEYCHSRRIIHRDLKSTNLLIDHSEKIIKLADFGLARELGDPDVLYSPKVATRLYRAPEILFECGQYSTPIDIWSVGCIFGEMVLGLPVLRAIDCKDELETIFRLFGTPTEETWPGVTTLCANLQTYPKFRPMDLSSIFPAFDPTGLNLLMRMLCLDPNRRISAESALRHAYFDDLDPSVTKKRPMTMEGGNNITEEFVTTMEGGSCSTNNKSVEVFVSTMEDGSSTATNNNEEVFAVMLEDGSSTTKVEEIVMTIDGVSSPTTDNNNAEKFGMTVEDGTTTTTSSDNAEEFSMTLEGGSSTTTNNNNAEAFAVGCLLLIRTTFGEEFEAQVVTFDHPSNILGLMEGSKDAPLRKIRLLNADYIQDFTILGQYEDPLDPRNCYVDLNDLQAREELAIRQAEADAERIGVGVTSEAQNIFDALSKTLPVRWDKNVIVVMNEVRISSPYHSDCVIGGAPAANDRVKKVLEMLRKRLQLPCSGGQ 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03075 647 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Mepo1g03075 647 ProSiteProfiles AD domain profile. 547 640 IPR047574 -
Mepo1g03075 647 SMART AD_2 545 631 IPR019181 -
Mepo1g03075 647 PANTHER CELL DIVISION PROTEIN KINASE 49 340 - -
Mepo1g03075 647 SMART serkin_6 50 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03075 647 CDD STKc_CDK_like 51 338 - -
Mepo1g03075 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Mepo1g03075 647 ProSiteProfiles Protein kinase domain profile. 50 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03075 647 Gene3D Phosphorylase Kinase; domain 1 30 132 - -
Mepo1g03075 647 Gene3D Transferase(Phosphotransferase) domain 1 148 361 - -
Mepo1g03075 647 FunFam Mitogen-activated protein kinase 150 352 - -
Mepo1g03075 647 Pfam Protein kinase domain 51 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03075 647 SUPERFAMILY Protein kinase-like (PK-like) 47 342 IPR011009 -
Mepo1g03075 647 Pfam Anticodon-binding domain 549 631 IPR019181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03075 Mepo-Chr1 34507484 34511976 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03075 48 341 Core Cell Cycle Gene Families AT3G48750 45.918 1.76e-87 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Mepo1g03075 Pkinase 2.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03075 K02206 - gmx:100799974 331.643