Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03060 ATGACAGAAATTGGTGAGAGCCTTTGTTCTCCTTTAAATGGTCAGTTCAATGAAGTTGATTCTGTTAGCAATGTAACCCCATTTTCCAAATCTGGATTCATTAGTAAGATTTGGTTTTGGTGGTTGAATCCATTGATGAAAAGGGGTCAAGAAAAGACGCTTCTCGATGAGGAAATCCCAGAGTTAAGAGAGTCCGAGCGAGCAGAAAGTTGTTATTTTTCGTTTGTAGAACAGTTAAACAAACAAAATCAACACGAACCATCATCACATTCGTCCGTTTTATGGACAATAATTGCGTGCCACCAAAGAGAGATTTTGATAACAGGATTCTTTGCTTTGCTCAAGGTACTCACTCTATCTTCTGGTCCTTTACTTCTGAATGAGTTTATATTGGTTGCTGAAGGCAACAAAAGTTTTGAATATGAAGGTTATGTATTGGCAATATCACTCTTCTTTATAAAGATCGTAGAATCCTTATCACAGCGACAATGGTATTTCCGAAGTAGGCTTATAGGGATGAAGGTTAGATCACTACTTACTGCTGTCATTCATAAAAAAATATTAAGGCTATCCAATTCTGCTAGATTAGTTCACTCTAGTGGTGAGATAATGAATTATATGACTGTGGATGCTTATAGAGTTGGAGAATTTCCATTTTGGTTTCACAAGACTTGGACAACAATTCTTCAACTGTGTATTGCATTAGTGATTCTTTTTCGTGCAATTGGACTAGCAACCATAGCTTCATTGGTAGTGATAATTCTCACCGTGCTTTGCAACACTCCGCTAGCAAAGTTACAACACAAGTTTCAGAGCAAACTAATGGTGGCGCAAGATGAGAGATTAAAAGCGAGTTCTGAGGCTCTTGTGAATATGAAAGTGTTGAAGCTATATGGTTGGGAAACCCATTTTAAAAATGCCATATATTACCTAAGAAATTTGGAACTCAAGTTGTTATATGCAGTGCAATTAAGAAGAACATACCTTGTCTTTCTTTTTTGGACCTCACCGATGTTGGTGTCTTCGGCTTCTTTTCTGGTCTGTTACTTCTTGAAAGTTCCTTTGCATGCAAGTAATGTTTTCACTTTTGTGGCAACATTGCGCCTTGTTCAAGATCCTATTACAGGTATTCCAGATGTTATTGCGGTGATCATTCAAGCAAAAGTTGCATTTGATAGGATTGTTAATTTTCTCCAATCACAAGAACTGCAAAGTGAAAATTTTAAGAACCGATGCTTAAATGATAATCTTAAAGGCTCAGTCTTTATCAAATCTGCTGACTTTTCATGGGAAGGTAATGCAATAAAGCCAACACTAAGAAGCATAAATTTGGACGTTAAACATGGACAAAGGGTGGCTATTTGTGGCGAAGTTGGCTCAGGAAAATCAACCCTCTTAGCAACAATTCTTGGAGAAGTTTCTAATACAAAAGGAGATATTGAAGTTCATGGGAAGTTTGCATATGTTTCTCAAACATCATGGATACAAACAGGTACAATACGGGAAAATATTTTGTTTGGATCCGAATTGGATGATCAAAGATACGAAGAAACACTTGAAAGGTCTTCACTGATAAAGGACATTGAGTTACTTCCCTATGGTGACCTCACTGAAATAGGTGAGAGAGGAGTTAATTTAAGTGGAGGTCAAAAACAACGAATTCAACTTGCTCGTGCTCTTTATCAAAATGCTGATTTATATCTATTGGATGATCCATTTAGTGCTGTTGATGCGCATACTGCAAAAAAATTGTTCAATGAATACATCATGGAAGGACTCAAAGGGAAAACTGTCTTACTTGTGACTCATCAAGTCGACTTCCTCCCAGCATTTGATTACATTTTGTTGATGTCAGATGGCGTAATCCTACAAGCTGGTTCATATCACGATCTACTGACCTCAAGTACAGAATTCCAAGGCCTTGTCAATGCTCACAAAAACACATCTGGTTCTGACCAGCTTATGAATGCCACTTTTTCACAGAGACATTCAACTTCTATAAAGATTACACAAGCTTTAGTGGAGAAGCGATTCACAGCACCAAATGGAAAACAATTAATCAAGCAAGAAGAAAGAGAAAGAGGAGACGTAGGATTGAGGCCTTACTTACAATATATGAATCAGATGAAAGGCTATATATACTTCTCTGTGGCTTCCCTTTGTCACCTTACTTTTGTTGTCTGTCAAATATTGCAAAACTCATGGTTAGCGGCAAATGTTGACAATCCTCGTGTCAGCACGTCGCAATTGATTTTAGTTTATTTCCTTATTGGGGTTTCTTCAACATTTTTCTTACTGATCAGAAGTCTACTTTTGGTTGCTTTGGGTCTTCAATCATCGAAGTATTTATTTTCACAGTTGATGAACTCCCTCTTTCGTGCACCTATGTCCTTTTATGATTCTACACCATCAGGAAGGATACTTAGTAGGGTCTCATCTGATCTGAGCATTATGGATATTGACATCCCATTCAGCCTCACTTTTGCAGTGGCAGGAACTCTAGTTTTTTATTCCAGTCTAACAGTTTTGGCAGTTGTCACTTGGCAAGTCTTGGTTCTTGCTATTCCAATGGTTTATGTTGCAATTTACTTGCAGCAGCGATACTACTTTGCCTTAGCAAAAGAAGTAATGAGGATAAATGGCACAACAAAATCTTCCATAGCTAATCATGTAGCTGAAACGGTTGCTGGATCTATGACAATAAGGGCTTTTAAGAAGGAGGGTCGTTCTTTTGAGAAGAACCTTGGTCTAATTGATTTTAATGCTAGTGCTTTTTTCCATAGTTTTGCTTCAAATGAGTGGTTGATCCAACGGTTAGAAACAATCAGTGCAGTCGTTCTCACCACAGCAACACTTTGCATAGTTATGCTACCCTCTGGAACTTTCACCTCAGGAATTATTGGCATGGCTCTATCTTATGGCCTTTCACTAAATGCGTCATTAGTATTTTCAATTCAAAATCAATGCACTCTTGCAAATAACATAATATCAGTAGAGAGGTTAAATCAATATATGCATATAGAAAGTGAGGCGGAAGAAATAGTAGAAGAAAATCGTCCTCCTTCGAATTGGCCAGTTGCAGGCAAAGTAGAAATAAACGACTTGAAGGTAATTCGATACAGACCTGACCGACCACTAGTACTTCACGGGATCACATGCACATTCAAAGCAGGGCACAAGATTGGTATTGTCGGAAGAACAGGCAGTGGCAAATCCACTCTAATCAGTGCCTTATTTCGTCTTGTCGAACCAGCAGGAGGAAAAATTATAGTTGATGGAATAGACATATCATCTTTTGGTCTTCATGATTTGAGGTCACGTTTTGGAATTATACCTCAGGAGCCTACCCTTTTTAATGGGACAGTAAGATATAATTTGGACCCTTTATCTCAACACACTGATCAAAAGATATGGGAGGTTCTTGGGAAGTGTCAGTTGCGAGAAGTTGTCCAAGGAAAAGAAGAGGGTTTAAACTCATCAGTTGTTGAAGATGGATCAAATTGGAGCATGGGACAAAGGCAGTTATTTTGTTTGGGGCGTGCTCTTTTGAGGCGAAGTAGGATATTGGTGTTGGACGAAGCAACTGCTTCAATTGATAATTCAACTGATCTTATTCTTCAAAAAACCATTAGGGCTGAGTTTGCAGATTGTACGGTGATCACAGTAGCACACAGGATACCAACGGTAATGGATTGCACTATGGTTCTTGCTATAAGTGATGGAAAACTGGCGGAGTATGACAAGCCAACAAACTTGATGAAGAGAGAAGAATCATTGTTCAGGAAGCTTGTTAAAGAATACTGGTCACATTTTCAGTCCGCAGAATCGCATTGA 3834 0.3839 MTEIGESLCSPLNGQFNEVDSVSNVTPFSKSGFISKIWFWWLNPLMKRGQEKTLLDEEIPELRESERAESCYFSFVEQLNKQNQHEPSSHSSVLWTIIACHQREILITGFFALLKVLTLSSGPLLLNEFILVAEGNKSFEYEGYVLAISLFFIKIVESLSQRQWYFRSRLIGMKVRSLLTAVIHKKILRLSNSARLVHSSGEIMNYMTVDAYRVGEFPFWFHKTWTTILQLCIALVILFRAIGLATIASLVVIILTVLCNTPLAKLQHKFQSKLMVAQDERLKASSEALVNMKVLKLYGWETHFKNAIYYLRNLELKLLYAVQLRRTYLVFLFWTSPMLVSSASFLVCYFLKVPLHASNVFTFVATLRLVQDPITGIPDVIAVIIQAKVAFDRIVNFLQSQELQSENFKNRCLNDNLKGSVFIKSADFSWEGNAIKPTLRSINLDVKHGQRVAICGEVGSGKSTLLATILGEVSNTKGDIEVHGKFAYVSQTSWIQTGTIRENILFGSELDDQRYEETLERSSLIKDIELLPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADLYLLDDPFSAVDAHTAKKLFNEYIMEGLKGKTVLLVTHQVDFLPAFDYILLMSDGVILQAGSYHDLLTSSTEFQGLVNAHKNTSGSDQLMNATFSQRHSTSIKITQALVEKRFTAPNGKQLIKQEERERGDVGLRPYLQYMNQMKGYIYFSVASLCHLTFVVCQILQNSWLAANVDNPRVSTSQLILVYFLIGVSSTFFLLIRSLLLVALGLQSSKYLFSQLMNSLFRAPMSFYDSTPSGRILSRVSSDLSIMDIDIPFSLTFAVAGTLVFYSSLTVLAVVTWQVLVLAIPMVYVAIYLQQRYYFALAKEVMRINGTTKSSIANHVAETVAGSMTIRAFKKEGRSFEKNLGLIDFNASAFFHSFASNEWLIQRLETISAVVLTTATLCIVMLPSGTFTSGIIGMALSYGLSLNASLVFSIQNQCTLANNIISVERLNQYMHIESEAEEIVEENRPPSNWPVAGKVEINDLKVIRYRPDRPLVLHGITCTFKAGHKIGIVGRTGSGKSTLISALFRLVEPAGGKIIVDGIDISSFGLHDLRSRFGIIPQEPTLFNGTVRYNLDPLSQHTDQKIWEVLGKCQLREVVQGKEEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNSTDLILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDKPTNLMKREESLFRKLVKEYWSHFQSAESH 1277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03060 1277 Gene3D ABC transporter type 1, transmembrane domain 76 402 IPR036640 GO:0005524|GO:0016020
Mepo1g03060 1277 Gene3D ABC transporter type 1, transmembrane domain 678 1012 IPR036640 GO:0005524|GO:0016020
Mepo1g03060 1277 SUPERFAMILY ABC transporter transmembrane region 94 394 IPR036640 GO:0005524|GO:0016020
Mepo1g03060 1277 ProSitePatterns ABC transporters family signature. 546 560 IPR017871 GO:0005524|GO:0016887
Mepo1g03060 1277 FunFam ABC transporter C family member 5 410 651 - -
Mepo1g03060 1277 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 734 993 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g03060 1277 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 28 1265 - -
Mepo1g03060 1277 SMART AAA_5 1057 1250 IPR003593 GO:0016887
Mepo1g03060 1277 SMART AAA_5 448 621 IPR003593 GO:0016887
Mepo1g03060 1277 CDD ABCC_MRP_domain1 423 620 - -
Mepo1g03060 1277 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 423 644 IPR003439 GO:0005524
Mepo1g03060 1277 FunFam ABC transporter C family member 5 679 1011 - -
Mepo1g03060 1277 Pfam ABC transporter 1048 1196 IPR003439 GO:0005524
Mepo1g03060 1277 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 106 386 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g03060 1277 CDD ABC_6TM_ABCC_D1 107 394 IPR044746 GO:0140359
Mepo1g03060 1277 Gene3D - 1013 1266 IPR027417 -
Mepo1g03060 1277 SUPERFAMILY ABC transporter transmembrane region 713 1010 IPR036640 GO:0005524|GO:0016020
Mepo1g03060 1277 FunFam ABC transporter C family member 3 1013 1266 - -
Mepo1g03060 1277 FunFam ABC transporter C family member 10 89 402 - -
Mepo1g03060 1277 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1030 1265 IPR003439 GO:0005524
Mepo1g03060 1277 CDD ABCC_MRP_domain2 1028 1249 - -
Mepo1g03060 1277 Pfam ABC transporter transmembrane region 106 363 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g03060 1277 Pfam ABC transporter transmembrane region 714 973 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g03060 1277 Pfam ABC transporter 439 573 IPR003439 GO:0005524
Mepo1g03060 1277 CDD ABC_6TM_ABCC_D2 715 1005 IPR044726 GO:0140359
Mepo1g03060 1277 Gene3D - 419 652 IPR027417 -
Mepo1g03060 1277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1021 1264 IPR027417 -
Mepo1g03060 1277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 644 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03060 Mepo-Chr1 34185852 34191047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03060 415 637 Calmodulin-binding Proteins AT2G36910 32.911 4.02e-25 111