Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03040 ATGAACAAGTTTTCTTCACTGTTGCTCTTTTTTCATTTATTTGCTGCTGCTCTTGGTTCACTTCATCCTTCGGGGCAAAAGGGTCTTGCTTCACAAAGGAATGTATTCACCTTACAACAAATCAAAGCAGCAACAAACAACTTCGATGAATCTCTCAAGATTGGAGAAGGAGGATTTGGTCCAGTTTACAAGCAAGGAACTCGTGAATTTACTAATGAGATAGGAATTATGTTAAGTTTACAACACCCTAATATTGTTAAGCTCCATGGCTTATGCGAAGAAGATGATCAGATGTTGTTGATATATGAATACATGGAAAACAACAACCTTGCTTATGCACTATTTGCCGAAAACGAAGACCAAGAAAATTGTCAATTGGGACTGGACTGGGTCACCGAAGAAGGCAAAATCCACATTACCAGTAGAATTACTGGCACATATGGATACATGGCTCCTGAGTATATGCATGGTTACTTGACAAACAAGGCAGATGTTTATAGTTTTGGAATTGTTATATTGGAAATTGTTAGTGGAGCCAGCAATACTCAAGAGGAACCCTTCTCTCTTCTTGATTGGGTGCACCTCTTGAAGGAAGAAGATAGTTTGATGGAGCTCGTTGATCCGAGGTTGGGCAAAGACGTCAAGAAAGAGGAAAACTAG 660 0.3955 MNKFSSLLLFFHLFAAALGSLHPSGQKGLASQRNVFTLQQIKAATNNFDESLKIGEGGFGPVYKQGTREFTNEIGIMLSLQHPNIVKLHGLCEEDDQMLLIYEYMENNNLAYALFAENEDQENCQLGLDWVTEEGKIHITSRITGTYGYMAPEYMHGYLTNKADVYSFGIVILEIVSGASNTQEEPFSLLDWVHLLKEEDSLMELVDPRLGKDVKKEEN 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03040 219 Gene3D Transferase(Phosphotransferase) domain 1 112 219 - -
Mepo1g03040 219 Pfam Protein tyrosine and serine/threonine kinase 66 120 IPR001245 GO:0004672|GO:0006468
Mepo1g03040 219 Pfam Protein tyrosine and serine/threonine kinase 144 197 IPR001245 GO:0004672|GO:0006468
Mepo1g03040 219 Gene3D Phosphorylase Kinase; domain 1 66 106 - -
Mepo1g03040 219 Gene3D Phosphorylase Kinase; domain 1 26 65 - -
Mepo1g03040 219 ProSiteProfiles Protein kinase domain profile. 1 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03040 219 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 132 - -
Mepo1g03040 219 SUPERFAMILY Protein kinase-like (PK-like) 28 207 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03040 Mepo-Chr1 33866885 33869415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03040 27 218 Receptor kinase-like Gene Family AT1G07650 44.403 3.82e-62 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g03040 PK_Tyr_Ser-Thr 4.1e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03040 - - gmx:100800529 243.817