Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03034 ATGTCAGGTTCCAAATTGGTGAATTATGTTATCTTGTGTTCATTTCTGGCTTTGAATTGCTTTCTTCAAGAGTTTGGATCCAACGCTCAACTCATACCACAAGATGAAGTGAAATCTCTACAAGCAATATCGGATAAACTAAAGAACGTGAATTGGAAAGTCACAGAACGTTCCTGCATTGAGGATGGAGGCTTTAATAATGACAATATTTTAGATGATGACATAGTGAGGAAAGTCACATGCGATTGCACTTTCCAAAATAACACCATTTGCCATATTACTAGCATCATGCTAAAAGGTCAAAATATAGCTGGAGTTATGCCTAGTGAATTTGGAAATCTTACTCAGTTGAAAGTACTTGATCTCACTCGCAACTATCTCAATGGCACAATTCCGACGAGTTTTGCTAGCAATTCGCTAGTTGTTTTGTCGCTTTTGGGAAACCGATTAAGTGGTCCAATTCCGACAGAAATTGGTGATATTTCCAGCTTGGAGGAACTGGTCTTAGAAAGTAATCAACTAGGAGGACCGCTTCCTCCTAGTCTTGGAAATTTGATCAAGTTGAAGAGACTGCTCCTTTCTTCGAATAACTTTAGTGGGATAATACCAGATTCATTTAGCAAACTAAACAATCTCACTGATTTTAGGATAGATGGAAGCAATTTATCTGGACAGATACCTAGTTTTATTGGGAACTGGACCAAACTTGAGAGATTGAATATGCAGGGTACATCTATGGATGGTCCAATTCCTCCCACCATATCTGAGTTGGAACTTTTGACTGAGTTGAGAATAAGTGATTTGAATGGACCAACCATGACATTTCCTAATCTGAAGGGTTTGAAAAACTTGCAACTACTGGAGTTGAGAAATTGCTTAATCACTGGTCCTATTCCTGATTACATTGGTGAAATGACAGACTTAATTACTTTAGATCTAAGCTTCAATATGTTGACTGGTTCAATCCCAAATTCAATTCAAGGATTGAAAAGGCTAGATTATATGTTTCTGACTAATAATTCTTTGAATGGACCGATTCAAGACTGGATACTGAACTTCAAAATTAACATAGATTTATCTGACAACAATTTTACGAAGTCTTCTGCAACTAGCTGCCAGCAGTTGAATCTGAACTTGGCTTCGAGCCATTCGTCTTCCGCGGTCACTTCACCTTCAACGTTTTGTTTGAAGAGGAACCTTCCTTGTGCAAGAAAACCCCAGTATAATTCATTGTTCATAAATTGTGGAGGACCTCAAGGGGATTATGATGGAAATAACTATTTCGGCGATCTGCAGAGAGATGGAATTTCAAATTTTGTTCTTAGAAATGAAGGACAATGGGCTTATAGCAGTACAGGAGTGTATATGGGAAATGTCCATGCAGATTATACTGCATTAAATACATTACCTTTAAATATTAATGGCCCAGAATACTATGAAACCGCGCGGCTTGCCCCTCTGTCACTTAAATACTATGGCCTCTGTATGCAGAAGGGAAATTATAAAGTGAAACTCCATTTTGCTGAGATAATGTTTTCTAATGACCAGACTTATCAAAGTCTTGGAAGACGCATATTTGATGTTTCAATTCAAGGTATTAAATATTTGAAAGATTTTAACATTATGGAAGAAGCTGGTGGAATTGGAAAGGGCATTGCTAAGGAATTTGATGTCGAAGTGAATGACAATACCTTGGAAATTCACTTATACTGGGCAGGGAAAGGAACCACTGCCATTCCTGACAGAGGTGTTTATGGACCTCTTATATCTGCTATCACAGTAACACCTAACTTTAGGAATCACTCAGAAGGGCTTTCTGCTGGAGTTATCGTTGGAATTGTGGCTGCATCATGTGCGCTTCTCATGCTTATACTGGTTACCCTTTGGAAGATGGGTATCCTTGGTGATAAAGATACAAGAGACCAAGAGCTTTTTGATCTGAAAACAGGTTATTTCAGCTTAAGACAAATTAAAGCAGCCACTAATGACTTTGATCCTGCAAATAAGATTGGTGAAGGGGGATTTGGGCCAGTATACAAGGGTGTGTTGTCAGATGGTGATGTCATTGCTGTTAAGCAGCTCTCCTCCAAATCAAACCAAGGGAATCGCGAATTTGTTAACGAAATAGGAATGATATCTGCTTTGCAGCATCCAAATCTTGTTAAGCTCTATGGCTGTTGCATTGAAGGAAAGCAGTTGCTGCTGATATATGAATACATGGAGAACAATTGTCTTGGCCGTGCACTTTTCGGTCATCGAGAACAGAAGCTGCACTTGGACTGGCCTACAAGAATGAAGATCTGTCTTGGCATAGCAAAGGGGTTAGCTTATCTTCATGAGGAATCAACATTGAAAATAGTACACAGGGATATTAAGCCAACTAACGTATTACTTGACAAGGATCTTAATGCCAAGATCTCTGACTTTGGTTTAGCTAAGCTTAATGAAGAAGGGAATACCCATATCAGTACACGAATAGCTGGAACAATTGGCTACATGGCTCCAGAATATGCCATGCGGGGGTACTTGACTGATAAAGCAGATGTATATAGCTTTGGAGTTGTAGCTTTAGAGATTGTTGCTGGAAAAAGCAACACAAATTTCCAGCCAATGGAGGAGTTTGTATATCTTCTGGATTGGGCCTATGATCTCCAAGATCAAGGAAACCTCCTGGAGTTGGTGGATCCAAGTCTTGGTTCAAGGTACTCGAAAAAGGAAGCCATGAGAATGCTGAACTTGGCATTGTTATGCACCAACACATCTCCTGGTCCTAGACCATCCATGTCATTGGTAGTAAGCATGCTTGAAGGAAAAACTCCAATCCAAGTGCCAGTAATCAACCGCGGTGAGAGCGGCCAACACGCAAGATTCAAAACTTCCGGATTGCAGTCACAAGACAGCCAACCTCTTGATTCTTCTACATTCTCACATGGAAGCAAAAGACAAGTATCCGTTCACTCCTCCACATCTCTTCAATGTGAAGATGATTTTTCGTCAAGCAGTAAAAGTCCTTGA 3015 0.3973 MSGSKLVNYVILCSFLALNCFLQEFGSNAQLIPQDEVKSLQAISDKLKNVNWKVTERSCIEDGGFNNDNILDDDIVRKVTCDCTFQNNTICHITSIMLKGQNIAGVMPSEFGNLTQLKVLDLTRNYLNGTIPTSFASNSLVVLSLLGNRLSGPIPTEIGDISSLEELVLESNQLGGPLPPSLGNLIKLKRLLLSSNNFSGIIPDSFSKLNNLTDFRIDGSNLSGQIPSFIGNWTKLERLNMQGTSMDGPIPPTISELELLTELRISDLNGPTMTFPNLKGLKNLQLLELRNCLITGPIPDYIGEMTDLITLDLSFNMLTGSIPNSIQGLKRLDYMFLTNNSLNGPIQDWILNFKINIDLSDNNFTKSSATSCQQLNLNLASSHSSSAVTSPSTFCLKRNLPCARKPQYNSLFINCGGPQGDYDGNNYFGDLQRDGISNFVLRNEGQWAYSSTGVYMGNVHADYTALNTLPLNINGPEYYETARLAPLSLKYYGLCMQKGNYKVKLHFAEIMFSNDQTYQSLGRRIFDVSIQGIKYLKDFNIMEEAGGIGKGIAKEFDVEVNDNTLEIHLYWAGKGTTAIPDRGVYGPLISAITVTPNFRNHSEGLSAGVIVGIVAASCALLMLILVTLWKMGILGDKDTRDQELFDLKTGYFSLRQIKAATNDFDPANKIGEGGFGPVYKGVLSDGDVIAVKQLSSKSNQGNREFVNEIGMISALQHPNLVKLYGCCIEGKQLLLIYEYMENNCLGRALFGHREQKLHLDWPTRMKICLGIAKGLAYLHEESTLKIVHRDIKPTNVLLDKDLNAKISDFGLAKLNEEGNTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVAGKSNTNFQPMEEFVYLLDWAYDLQDQGNLLELVDPSLGSRYSKKEAMRMLNLALLCTNTSPGPRPSMSLVVSMLEGKTPIQVPVINRGESGQHARFKTSGLQSQDSQPLDSSTFSHGSKRQVSVHSSTSLQCEDDFSSSSKSP 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03034 1004 FunFam Putative LRR receptor-like serine/threonine-protein kinase 740 947 - -
Mepo1g03034 1004 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 966 - -
Mepo1g03034 1004 SMART serkin_6 664 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03034 1004 Gene3D Phosphorylase Kinase; domain 1 630 739 - -
Mepo1g03034 1004 Gene3D Transferase(Phosphotransferase) domain 1 740 943 - -
Mepo1g03034 1004 Gene3D Ribonuclease Inhibitor 33 272 IPR032675 -
Mepo1g03034 1004 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 202 269 - -
Mepo1g03034 1004 Gene3D Ribonuclease Inhibitor 273 393 IPR032675 -
Mepo1g03034 1004 SUPERFAMILY Protein kinase-like (PK-like) 649 942 IPR011009 -
Mepo1g03034 1004 Pfam Leucine Rich Repeat 187 209 IPR001611 GO:0005515
Mepo1g03034 1004 Gene3D - 409 597 - -
Mepo1g03034 1004 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 635 739 - -
Mepo1g03034 1004 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 36 201 - -
Mepo1g03034 1004 Pfam Malectin domain 410 592 IPR021720 -
Mepo1g03034 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Mepo1g03034 1004 Pfam Leucine rich repeat 92 150 IPR001611 GO:0005515
Mepo1g03034 1004 Pfam Leucine rich repeat 283 342 IPR001611 GO:0005515
Mepo1g03034 1004 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 408 597 - -
Mepo1g03034 1004 Pfam Protein tyrosine and serine/threonine kinase 668 934 IPR001245 GO:0004672|GO:0006468
Mepo1g03034 1004 SUPERFAMILY L domain-like 90 368 - -
Mepo1g03034 1004 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 270 393 - -
Mepo1g03034 1004 MobiDBLite consensus disorder prediction 959 1004 - -
Mepo1g03034 1004 ProSiteProfiles Protein kinase domain profile. 664 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03034 1004 CDD STKc_IRAK 670 937 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03034 Mepo-Chr1 33724906 33735815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03034 10 1002 Receptor kinase-like Gene Family AT1G53440 59.861 0.0 1162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g03034 PK_Tyr_Ser-Thr 4.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03034 - - gmx:100815226 1509.97