Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03021 ATGGGAGTTCCAGAGAGAGATCCTCTTTCACAGTTGAGTTTACCACCTGGTTTTAGATTCTTCCCCACTGATGAGGAGCTTCTTGTTCAGTATCTATGTCGTAAAGTTGCAGGGCATCATTTTTCTTTGCCAATTATTGCTGAAATTGACTTGTACAAGTTTGATCCTTGGGTTCTTCCAGGCAAGGCAAATTTTGGTGAGAAAGAATGGTATTTCTTCAGTCCAAGGGACAGGAAATATCCAAATGGTTCTAGACCAAACAGAGTTGCTGGTTCTGGTTACTGGAAAGCCACAGGAACAGATAAAATTATCACAACTGAAGGTAGAAAAGTTGGCATAAAAAAAGCACTTGTTTTCTATATTGGCAAAGCACCAAAAGGAACAAAAACTAATTGGATTATGCATGAGTATCGTCTTCTTGACGCTTCGCGAAAACACAATCTTGGTAGCTCAAAACTTGATGATTGGGTTTTGTGTCGAATATACAAGAAAAACTCAAGCTCGCAAAAGGAAATTCCAACATTTTCAAGCAAAGAATGCAGCAATGGTTCTTCGCCTTCATCGTCGTCCCAGGTGGATGAAATGTTGGACTCGTTCCTGGAAATTGATGATCAGAGCTTTGCACTGCCGCGGGTGACATCACTCCGAATGCTACAACAAGAGGAGAAGTTCGGGTTTCAAAACATGGGTACCGGAATTTTCTCTGATTGGGTTAACCCGACGGATATTGAATCCTCACCGGAATTTGGTTTAGGAAACCAATGTCAGGGGATGCTGAATTACGGTTGTAATGACTATTGTGTTCCTTCCGTGCCACCGTTTGGCAACATGGACTTGTCGGCGGAGTCCAAGAACCCCACCGACGAAGAGGTTCAAAGCGGCATGAGGACTAACCGAGTCACCGACACTTCTAGTTTATATCAACATAATACTAATGTATTTTTATCGGGCTTAGGTGACCCATTTGGGTTTGGGTATTCGGGTCATTAA 990 0.4253 MGVPERDPLSQLSLPPGFRFFPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLPGKANFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDASRKHNLGSSKLDDWVLCRIYKKNSSSQKEIPTFSSKECSNGSSPSSSSQVDEMLDSFLEIDDQSFALPRVTSLRMLQQEEKFGFQNMGTGIFSDWVNPTDIESSPEFGLGNQCQGMLNYGCNDYCVPSVPPFGNMDLSAESKNPTDEEVQSGMRTNRVTDTSSLYQHNTNVFLSGLGDPFGFGYSGH 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03021 329 ProSiteProfiles NAC domain profile. 14 164 IPR003441 GO:0003677|GO:0006355
Mepo1g03021 329 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 193 - -
Mepo1g03021 329 Gene3D NAC domain 23 170 IPR036093 GO:0003677|GO:0006355
Mepo1g03021 329 MobiDBLite consensus disorder prediction 280 298 - -
Mepo1g03021 329 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Mepo1g03021 329 SUPERFAMILY NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
Mepo1g03021 329 FunFam NAC domain-containing protein 72-like 23 169 - -
Mepo1g03021 329 MobiDBLite consensus disorder prediction 279 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03021 Mepo-Chr1 33635554 33637785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03021 1 295 NAC Transcription Factor Family AT4G27410 60.443 1.56e-116 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo1g03021 NAM 8.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03021 - - gmx:100811301 508.064