Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02997 ATGGCTATATATATTTGTCTATGGACAATTCCAAAGGACCATATATTTATGGAGGATACCGGAGGAGTGAGAAAAGGCGCATGGACTTACAAGGAAGATGAGCTACTCAAGGCTTGCATTAACACGTACGGTGAAGGAAAATGGAATTTAGTTCCTCAGAGATCTGGATTGAATAGATGCAGAAAAAGTTGTAGATTGAGGTGGTTAAATTACTTAAGCCCCAACATCAACAGAGGAAGATTTTCTGAGGATGAAGTTGATTTGATCCTAAGATGGTCATTGATTGCTGGAAGGCTGCCGGGTAGAACAGCTAATGATGTGAAGAACTATTGGCACACAAATTTGGCAAAGAAAGTGGTTTCAGAAAAGGAAGAAGAGAAAGAAAAAGATAAACCTAAGGAAACCATGGAAGCTCATGAAGTTATTAAACCTCGTCCCATAACTTTGTCAAGTCAATCAATTTGGTTGAAGGGGAAAAATACTATTCCTAGAGATCGTGATTACTCGGAGACTATGGCTTCAAATCAAATTGGTAAAGAGTGTGCTTCTGCTTCAAAACCAAATCTAGGTAATGCCCCAATATCATGTGCAATGTGGAACTTGGGAGAACATGTAGACAGTGAGAAAATTGGCTCATGCTCTTCATTACAAGAGGAGAACTTAATGGAGTTTCCAAATGTTGATGACTCCTTTTGGGATTTCAACCTTTGTGATTTCAATTCTCTTTGGGATCTACCGTGA 741 0.39 MAIYICLWTIPKDHIFMEDTGGVRKGAWTYKEDELLKACINTYGEGKWNLVPQRSGLNRCRKSCRLRWLNYLSPNINRGRFSEDEVDLILRWSLIAGRLPGRTANDVKNYWHTNLAKKVVSEKEEEKEKDKPKETMEAHEVIKPRPITLSSQSIWLKGKNTIPRDRDYSETMASNQIGKECASASKPNLGNAPISCAMWNLGEHVDSEKIGSCSSLQEENLMEFPNVDDSFWDFNLCDFNSLWDLP 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02997 246 CDD SANT 80 115 IPR001005 -
Mepo1g02997 246 ProSiteProfiles Myb-like domain profile. 20 72 IPR001005 -
Mepo1g02997 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 119 IPR017930 -
Mepo1g02997 246 FunFam Myb transcription factor 25 77 - -
Mepo1g02997 246 SUPERFAMILY Homeodomain-like 25 114 IPR009057 -
Mepo1g02997 246 ProSiteProfiles Myb-like domain profile. 73 115 IPR001005 -
Mepo1g02997 246 SMART sant 77 117 IPR001005 -
Mepo1g02997 246 SMART sant 24 74 IPR001005 -
Mepo1g02997 246 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 20 169 - -
Mepo1g02997 246 CDD SANT 27 72 IPR001005 -
Mepo1g02997 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 76 IPR017930 -
Mepo1g02997 246 Gene3D - 18 78 - -
Mepo1g02997 246 Pfam Myb-like DNA-binding domain 25 72 IPR001005 -
Mepo1g02997 246 Pfam Myb-like DNA-binding domain 91 115 IPR001005 -
Mepo1g02997 246 Gene3D - 81 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02997 Mepo-Chr1 33173959 33174985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02997 18 153 MYB Transcription Factor Family AT1G66370 55.705 2.49e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo1g02997 Myb_DNA-binding 2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02997 - K09422 mtr:11424892 305.834