Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02988 ATGTCTAGGAAATTAAATCTTACCCCTTTACACATAGCTGATCATCCAGTTGGTTTGAATTACAAAATTTCACAAATAATGTCACTTCTAGAAAACAAGTCTAATGATGATGATGATGTTGTTTGCATGGTTGGAATTTGTGGAATTGGTGGCATTGGTAAAACAACACTAGCTAGAGCAGTATACAACTCAATTTCTAGAAAATTTGATGGTTCAAGTTTTCTTGTTGATGCAAGAGAAAATTCAATGGAACATGGTCTAGTACACTTGCAAGAGACCCTTCTGCTCCATTTGCTAGATGAAAATATCAAATTGGATGATGTGAGCAAAGGAATTCCTATAATAAAAAGACGGCTACGCAACAAGAAGGTTCTTTTGATTCTCGATGACGTTGATAATCTTCAACAGTTAAGATCATTGGTCGGAAGACGTGATTGGTTTGGTTTTGGAAGTAAGATCATCATAACAACAAGAGATAAACAATTGCTAGCTGCTCATGGAGTTAAAAAATTATATGAAGTGAAAGAACTGAATGATCATGAATCTCTTGAACTGTTTAGTATGAATGCTTTTAGAAAAAATGTACCTGATGCAAGTTATGGGGAGATAGTAAAAAGTGTAGTGCAGTATGCAAAAGGCCATCCATTAGCTTTGAATGTAATAGGTTCAGATTTATTTGGCAAAACAATTGAAGAATGGAAAAGTGCATTGAATAAATATGAAACAATTGCAAGCAAGGAGATTCTGAATGTCCTTAAAGTAAGCTATGACAATTTGGATGATAATGAAAAGGAAATTTTCCTTGACATTGCTTGTTTCTTCAAAGGATATCCGAAGGCCGATGTAGAAAAGACACTAGATGCAAGTCGTTTTTATTCGAAATATGGCATCGGAGTACTTGTTGACAAATATCTTGTAACAATCAGTGAATCCAATTCAGTAAAGATGCATGATCTTATAGAAGACCTTGGTAAAGACATTGCTCGAAAGGAGTCACCGTTTGATCCGAGCAAACGGAGAAGATTATGGCATCATGAGGATGGCATCATTGCTCGAAAGCTATTTTATCTTTTAGATAACTACTTTCCTTTTGAAAAAACATTAAAATTTCACTAA 1116 0.345 MSRKLNLTPLHIADHPVGLNYKISQIMSLLENKSNDDDDVVCMVGICGIGGIGKTTLARAVYNSISRKFDGSSFLVDARENSMEHGLVHLQETLLLHLLDENIKLDDVSKGIPIIKRRLRNKKVLLILDDVDNLQQLRSLVGRRDWFGFGSKIIITTRDKQLLAAHGVKKLYEVKELNDHESLELFSMNAFRKNVPDASYGEIVKSVVQYAKGHPLALNVIGSDLFGKTIEEWKSALNKYETIASKEILNVLKVSYDNLDDNEKEIFLDIACFFKGYPKADVEKTLDASRFYSKYGIGVLVDKYLVTISESNSVKMHDLIEDLGKDIARKESPFDPSKRRRLWHHEDGIIARKLFYLLDNYFPFEKTLKFH 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02988 371 Gene3D - 5 170 IPR027417 -
Mepo1g02988 371 Pfam NB-ARC domain 25 257 IPR002182 GO:0043531
Mepo1g02988 371 SUPERFAMILY "Winged helix" DNA-binding domain 246 347 IPR036390 -
Mepo1g02988 371 PRINTS Disease resistance protein signature 118 132 - -
Mepo1g02988 371 PRINTS Disease resistance protein signature 211 225 - -
Mepo1g02988 371 PRINTS Disease resistance protein signature 43 58 - -
Mepo1g02988 371 Gene3D - 176 260 IPR042197 -
Mepo1g02988 371 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 347 IPR044974 GO:0006952
Mepo1g02988 371 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 270 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02988 Mepo-Chr1 33090532 33091647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02988 39 344 WRKY Transcription Factor Family AT5G45050 41.694 8.03e-64 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02988 - - pcin:129293148 447.203