Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02985 ATGGCTGCTTACTCATCTTCTTTCAACCATGGATATGTTTACCATGTTTTCTTAAGCTTTAGAGGCGAAGATACACGCGAAAATTTTACCGGCCATCTTTACAACGCTCTTGATCAAAGGGGAATCAACACTTTCATAGATGATGAAGGGTTAAGGATTGGAGAAGAGATTTCACAGTCTCTTCTTAAAGCAATAGAAGAGTCAAGGATTTCCATCATCATATTTTCAAAGAACTATGCTAATTCCACTTGGTGTCTTGATGAACTTGTCAAGATCCTTGAGTGTAGGAAAGAGAAAGGACAAGTGGTTTGCTCAATTTTTATAATATTTGAAGATAAGAAGGAAAAGGTGAAGAAATGGAGGATGGCTTTGACTGAAGCTGCAAACCTTTCTGGCTGGCATTTTAGTAATGGGTATGAATTTAAATTTATCCAAAGCATAGTAGATGAGGTATCGAGAAAGTTGAATCGAATCCCTCTAAATGTCGCTACACACCCAGTTGGACTGCAATCTCGCATATCAGATGTTAACTCACTCTTAGAACTTGAATGCAATGATGTAAAAATGATAGGAATTTATGGTATTGGTGGAATTGGTAAAACAACCATTGCTAAAGCTGTGTACAACACAATATATGGCAAATTTCGATATGCGAGTTTTCTTGCAAATGTAAGAGAAAATGCAAGTCATAGGATTGGCTTAGTCAAACTCCAAGAGAGACTTCTGTTTGAGATACTTGGCGAGAAAGGAATGAAAATAGGTAATGTTGATAAGGGAATCAATATAATAAAAGATAGGTTATGTAGAAAAAGAGTTCTACTTGTTATTGATAATGTGGATGATGTGGAACAACTTCAAGCATTAGTCGGCGGATTTGATTGGTTTGGTCCTGGAAAAGGTCTTCCATTGGCTTTAACTATCTTAGGTTCTGATCTGTGTGGTAGAAGTATTCATCAGTGGGAATCTGCATTAGATAAATACAAGAGAACTCCTAATAGAAAAGTTCAGGATATACTTAGAATAAGTTTTGATGGTTTAGAGGAAAATGAAAAGGAAATTTTTCTGTATATAGCTTGTTTCTTTAAAGGGGAGATAATGGAATATGCATCAAAAGCATTGCGCGCGTGTGATCTGCATCCAGTTATTGGTATTCCAGTGCTTGTTGATAAGTCTCTCATAAACTTGGATGAAAAAGGCGTATTGTCAATGCATGATCTTATACAAGATATGGGGAGGAAATTGTTCGGCAAGAATCACCGATGGATCCTGGGAACCGACAAGATTCAAGGTTTAATGCTGAGCCTACCTGAAAAGCAAGAGGTGCAGCTAAAATCTCAAGACCTAAAGAAGATGAGAAACCTTAGAATGTTGATAATTCGGAATGCTCAATTTTTGGGAGGCCATGTTAATCTACCTAATAATTTACGGCTGCTTGATTGGGAGGAATACCCTTCTCCATGTTTACCTTCTGATTTCCTTCCTGAGAAAATTGTAATGCTAGAGTTGCGGCACAGTCGTATAACATTGGAGAAACCATTCAAGAACTATGCAAATATGACTTCTCTGAATCTTAGTTCATGTGAATTCCTCATAGAAATACCTGATGTTTCAGGGTTACCGAGTTTAGAGCAGATTATTCTAGAGGATTGTACAGGCTTAGTTGAGATTCATGAATCACTTGGATCACTTGATAAACTCGTTTATTTAGGTGTTGAAAGGTGCACTGAGCTAAAGAAGTTACCAAGTGTCCTAAACTTGCCACTTTTATCATGCATTGCTCTTAATGGATGTACTCAACTTGAGAATTTCCCAAATTTATATGGAAAAATGGAAAATCTTAGAATCATCGAGGCGGAAGAGACGGCTATACACGAATTGCCTTCAAATATGGTCCATTTCAGCAACCTTGAGGTGTTAGTACTAAAGTGTTGCACAAATCTTAAGGATTTTCCTAGAACCATTTCTTTGTTGCCAAATCTTGTGTTACTTGATATTTCTGGCTGTCCAAAACTTCAACTATTTCAAGAGTCCAATGAAAGTTCATCAAATTTAGAGTTACCAATAAAACCATGTCTAGAAATCCAATCCTCATATGGTTTCCCTTTATTGGAAACCCTTGATCTCAGTGACTGCAATCTTTCAGATGAAAATCTAGAAATCCTTTGTTGCTTTTCCAACCTCACTTCCTTAGACATATCAAAAAACCATTTTGTAACGCTACCTAAATGCTTCAACAGACTCAGTAGCTTGCATGAGCTTTACATGGCAAATTGCAATAATCTTCAACAAATTTTTGGGATTCCATCTAATTTAGAACATATAGATGCCACTAGTTGCACAATGCTGAATTCACAATCATTGGACCTCTTATTAAGCCAGGTATTCAACAGGACATTCAAATTTGAAGTTATAGCACCAAAGTCAAGTATACCGATGCCTTTCAAGTTCAACTACCATAGCAAAGGAGGATCCATTTCATTCTCGGTTGGCCACGAGTTCTCAAGAATTGCCCTATGCTTCATTTTTGAACTAGGAAATAAAAGAATTGGTTTTTTTGCCTGTGAAGTCCAGATATCTGTTAATGGGCAGAAAGCATCCAATAGAAAACAGTACTTTCTTTCTGTTTCTGGTGATCTTGTATGGCTATATCAGCAAGAAAACCTGATGGATTTAAATACATATTTACTGCATGAACAGAATTCTGTGGAAGTTTCTTGTGAAATTATAGATGCGAGTGAAGGCGCAGATGTGACGATATGCTTTTGTGGAGTTCATGAGTATAAGGAAGATGAGGAATTGAAGAAACCAAATTTGATATTGTGCACTAATTCTAGTCCTTGTAATAATGAATACTTGGATAATACACAATTTTCTATGGAAACACATGAAAATCGATGTCATTATGAAGATAACTTGGGAAATGATTGTTGCACCTTGCCTGAGAATTTAAGGCTGCCTAAAATATCAGATGAACAAATGCAACAGCTTTCAGCTTTGATGGGCTCACAAATGCTTGAAGTTAATGGTTTTATGGCTCAAAAGAGTGAAGATAGTATAGATAGTTTGTCAGCTGATACAATACATCAAAGCAAAGAGATGTCTTCATTAGATATGCAGCTATATGGTGATAGAATTTGGGATCCAATGCTATTAGAATGCCAATTAAACTGCATGAATGAGAAGAATAAAGACAACATCTTGTCGAGTTCGAGTCATCAAGAGTTGGAGCCAGAAGAACCTTTAAGTGATGACAATATGGAAGCATTTTATTCTACACTCCATGCTGAGACATATGCTCTATTAGGAGATATAGGAGATACTGGTGATGATCCAAAATTGGCTTATCCTAAACTGAGTGAAGAAACCAAGAAAGCCTTGGAAATTCTGAAAGAACTCCTCTCCAAACAAATTTGTCATCTTATAGAACCAACATCATCAACATCCATGAAAACTACATTGGAATATCTTTGTACTTTAATTGCAGATGATGATCTTTCAATGAGGTTAAAATCTGTATTACTACAAATTTTAGCCGACTTTACTCAATGGAGTTGTGACTACAATGATGCAAACATGAAACTTGAGTCCTCAATTTTAGTACTATCAAAGCTTCAAAAACTTGAAGAGGGTGTAGTAGCAAACAAGAACCAGTTCACCGAATTTCTGTCAATAGAGAGCGAGTTGGGAAGCCAACTAGTTTATTTGGAAGAAAGAATGAAAGAGCTTGAAGAGCAAATTAGTGTCATTAAAGTGAACATGTCAATCTCTGCAGTTGCAAGGGACACTGCTCTTAGAAAGAAAAGAGAAACATTTGAAGCAGGAAGAGTGTTGAAAGCTCAAAGAGATGAGTTAAGGAAGCGAAGGCTGCGGTTGAGAGCGGAACAAGAATCGGCAAAATCTACCAAAGGTTACATTGAAGATGAATGGTCAAAGATTAGAGAGAAATTTGATAGAATCTTGAAAATTTTGAGTTAG 3975 0.3653 MAAYSSSFNHGYVYHVFLSFRGEDTRENFTGHLYNALDQRGINTFIDDEGLRIGEEISQSLLKAIEESRISIIIFSKNYANSTWCLDELVKILECRKEKGQVVCSIFIIFEDKKEKVKKWRMALTEAANLSGWHFSNGYEFKFIQSIVDEVSRKLNRIPLNVATHPVGLQSRISDVNSLLELECNDVKMIGIYGIGGIGKTTIAKAVYNTIYGKFRYASFLANVRENASHRIGLVKLQERLLFEILGEKGMKIGNVDKGINIIKDRLCRKRVLLVIDNVDDVEQLQALVGGFDWFGPGKGLPLALTILGSDLCGRSIHQWESALDKYKRTPNRKVQDILRISFDGLEENEKEIFLYIACFFKGEIMEYASKALRACDLHPVIGIPVLVDKSLINLDEKGVLSMHDLIQDMGRKLFGKNHRWILGTDKIQGLMLSLPEKQEVQLKSQDLKKMRNLRMLIIRNAQFLGGHVNLPNNLRLLDWEEYPSPCLPSDFLPEKIVMLELRHSRITLEKPFKNYANMTSLNLSSCEFLIEIPDVSGLPSLEQIILEDCTGLVEIHESLGSLDKLVYLGVERCTELKKLPSVLNLPLLSCIALNGCTQLENFPNLYGKMENLRIIEAEETAIHELPSNMVHFSNLEVLVLKCCTNLKDFPRTISLLPNLVLLDISGCPKLQLFQESNESSSNLELPIKPCLEIQSSYGFPLLETLDLSDCNLSDENLEILCCFSNLTSLDISKNHFVTLPKCFNRLSSLHELYMANCNNLQQIFGIPSNLEHIDATSCTMLNSQSLDLLLSQVFNRTFKFEVIAPKSSIPMPFKFNYHSKGGSISFSVGHEFSRIALCFIFELGNKRIGFFACEVQISVNGQKASNRKQYFLSVSGDLVWLYQQENLMDLNTYLLHEQNSVEVSCEIIDASEGADVTICFCGVHEYKEDEELKKPNLILCTNSSPCNNEYLDNTQFSMETHENRCHYEDNLGNDCCTLPENLRLPKISDEQMQQLSALMGSQMLEVNGFMAQKSEDSIDSLSADTIHQSKEMSSLDMQLYGDRIWDPMLLECQLNCMNEKNKDNILSSSSHQELEPEEPLSDDNMEAFYSTLHAETYALLGDIGDTGDDPKLAYPKLSEETKKALEILKELLSKQICHLIEPTSSTSMKTTLEYLCTLIADDDLSMRLKSVLLQILADFTQWSCDYNDANMKLESSILVLSKLQKLEEGVVANKNQFTEFLSIESELGSQLVYLEERMKELEEQISVIKVNMSISAVARDTALRKKRETFEAGRVLKAQRDELRKRRLRLRAEQESAKSTKGYIEDEWSKIREKFDRILKILS 1324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02985 1324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 357 IPR027417 -
Mepo1g02985 1324 Pfam TIR domain 14 159 IPR000157 GO:0007165
Mepo1g02985 1324 SUPERFAMILY "Winged helix" DNA-binding domain 334 420 IPR036390 -
Mepo1g02985 1324 Gene3D - 302 347 IPR042197 -
Mepo1g02985 1324 Gene3D Ribonuclease Inhibitor 432 600 IPR032675 -
Mepo1g02985 1324 SUPERFAMILY L domain-like 432 786 - -
Mepo1g02985 1324 Coils Coil 1281 1301 - -
Mepo1g02985 1324 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 133 IPR035897 -
Mepo1g02985 1324 Coils Coil 1225 1252 - -
Mepo1g02985 1324 Gene3D Ribonuclease Inhibitor 601 795 IPR032675 -
Mepo1g02985 1324 SMART till_3 13 154 IPR000157 GO:0007165
Mepo1g02985 1324 PRINTS Disease resistance protein signature 266 280 - -
Mepo1g02985 1324 PRINTS Disease resistance protein signature 189 204 - -
Mepo1g02985 1324 PRINTS Disease resistance protein signature 655 671 - -
Mepo1g02985 1324 ProSiteProfiles TIR domain profile. 12 155 IPR000157 GO:0007165
Mepo1g02985 1324 Gene3D - 153 301 IPR027417 -
Mepo1g02985 1324 Gene3D - 12 152 IPR035897 -
Mepo1g02985 1324 Pfam NB-ARC domain 179 287 IPR002182 GO:0043531
Mepo1g02985 1324 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 298 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02985 Mepo-Chr1 33081300 33086457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02985 8 678 WRKY Transcription Factor Family AT4G12020 26.701 2.15e-59 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02985 - - tpra:123904012 1627.07