Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02980 ATGGGGCAATCAGTCAAAATTTCAGACACGGTTGTTTCATACGGTGGAAACTATGAACTGGGATTTTTCACCAGAAACAGAGAGAACTCCACCAAGTACTACGTGGGTATATGGTTTAAAAAGGTAGCAAAGGACAAGATTATTTGGGTTGCCAACAGAGATTACGCATTTCAAACATCCTCGACGTTACTTACCATTCATCCTGATGGTAACATTGTGATCATAGATGGACAAATGACGTACCTCGTGACCAACGTTCCAAATAACAGCTATAGTACCTATGCAACGCTCTTGGACTCGGGAAACTTGGTACTATTGAACACCTCTAACAAAGCGATTTTATGGCAGAGTTTTAATCACCCCACGGATACCCTTTTACCTGGAATGAACATCGGACAAGATATTAACATGGGGTACACTTTGTCTTTGAGATCATGGACATCTGCAGAAGACCCTGCTCTTGGACCGTATACTCTTCAATATGTCGCCGGCTTAGCGAGTCTAACCATAAATAAAGGTTCTAATGTGTTGTGGGTTGATGGCAATTCCAATTTATCTATTCAGGGTGTTCTAAGTCGAGTGGATTTGCATCTCAAAAGAGACTATGACACTTTTTCAATTGGTAGCAATTCTAGGTTGGTATTGGAAGTGTCTGGGGATCTTAAATACCAAGGTTGGTCAGAGGAATCTAAGCGTTGGCTTTCTCTACAGTCATCCAAGTGCGGAACAAACAATTCTTGTGGAATTTTTTCCATTTGTAATCCGCAAGATCACGACCCTTGTCACTGTCTCAATGGTTTTGAACCGTTTGATGCTGATTCTTGGAGAAAGGGGAATAGGTCAGCTGGATGTGTCAGGATAAATGAATTATCCTGCAGCAGTAAAAACAGTATAGATGGATTCAAACGTTTCAGTTCAGTTGAATTACCTCCATATGAAGTGAACCTACAGTTCGATGCGCTATCACAGTGTAACAACACTTGTTACACCAATTGCTCTTGTGTTGCTTATGCTTATGATTTTAACGGCAACTGCATGTTGTGGAATGATCAAGTACAGACTCTGAAGAACATCTCAACTGATACTCAAGATGGTAATAATAAACCAAATTTTTATCTCCGACTTGCTGGCTCAGACTTGCTTCCCACAAATTCTAATGTAACGACTGCAGTTGGAAGACATGAAAACAGGAAGAGGAATCTAATTCTAATTGCTACTTTGATCTCATTTCTAATATTGCTTATACTGATTGGTCTATTTGTTTACTGGACTAGAAAGCAAAGGAGAAAAGAATATGCTATGGAAGGCGTTTACTCAATTAAATCTGACGTGTTTAGCTTTGGAGTCCTTTTGTTAGAGATTATAAGTGGAAAAAAGAATACTGGTTTTTATCAAACAAATTCCTTCAATCTTCTTGGATATGCTTGGGATCTATGGACCAACAATTCTGGAATGGACTTGATTGATTCAAAACTGGATGATATCTCCAACAAGCATTTAGTACCAAAATACGTGAATATTGGACTTCTATGTGTTCAACAAAGTCCAGAAGATAGACCAACCATGTCTGATGTAGTAACAATGATTGGGAATGACACTACATCCCTTCCTAGTCCAAAGCCACCGGCATTTCAAAATCTAAGAGGTATTGAAAATTCAAGACTCTCTAGAAGCATAGAAGAAAACGTTTCTGTGAATGTTGTCACAAATTCACTAGTTGAAGCAAGATGA 1731 0.3894 MGQSVKISDTVVSYGGNYELGFFTRNRENSTKYYVGIWFKKVAKDKIIWVANRDYAFQTSSTLLTIHPDGNIVIIDGQMTYLVTNVPNNSYSTYATLLDSGNLVLLNTSNKAILWQSFNHPTDTLLPGMNIGQDINMGYTLSLRSWTSAEDPALGPYTLQYVAGLASLTINKGSNVLWVDGNSNLSIQGVLSRVDLHLKRDYDTFSIGSNSRLVLEVSGDLKYQGWSEESKRWLSLQSSKCGTNNSCGIFSICNPQDHDPCHCLNGFEPFDADSWRKGNRSAGCVRINELSCSSKNSIDGFKRFSSVELPPYEVNLQFDALSQCNNTCYTNCSCVAYAYDFNGNCMLWNDQVQTLKNISTDTQDGNNKPNFYLRLAGSDLLPTNSNVTTAVGRHENRKRNLILIATLISFLILLILIGLFVYWTRKQRRKEYAMEGVYSIKSDVFSFGVLLLEIISGKKNTGFYQTNSFNLLGYAWDLWTNNSGMDLIDSKLDDISNKHLVPKYVNIGLLCVQQSPEDRPTMSDVVTMIGNDTTSLPSPKPPAFQNLRGIENSRLSRSIEENVSVNVVTNSLVEAR 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02980 576 SMART ntp_6 296 375 IPR003609 -
Mepo1g02980 576 Gene3D - 1 119 IPR036426 -
Mepo1g02980 576 Pfam Domain of unknown function (DUF3403) 531 576 IPR021820 GO:0004674
Mepo1g02980 576 SUPERFAMILY alpha-D-mannose-specific plant lectins 47 152 IPR036426 -
Mepo1g02980 576 CDD PAN_AP_plant 290 376 - -
Mepo1g02980 576 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 118 - -
Mepo1g02980 576 ProSiteProfiles PAN/Apple domain profile. 292 376 IPR003609 -
Mepo1g02980 576 CDD B_lectin 3 121 IPR001480 -
Mepo1g02980 576 Pfam S-locus glycoprotein domain 209 269 IPR000858 GO:0048544
Mepo1g02980 576 Pfam PAN-like domain 292 351 IPR003609 -
Mepo1g02980 576 SMART blect_4 2 121 IPR001480 -
Mepo1g02980 576 Gene3D Transferase(Phosphotransferase) domain 1 416 536 - -
Mepo1g02980 576 SUPERFAMILY Protein kinase-like (PK-like) 431 545 IPR011009 -
Mepo1g02980 576 Pfam D-mannose binding lectin 47 146 IPR001480 -
Mepo1g02980 576 ProSiteProfiles Bulb-type lectin domain profile. 1 118 IPR001480 -
Mepo1g02980 576 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 430 520 - -
Mepo1g02980 576 Pfam Protein tyrosine and serine/threonine kinase 431 528 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02980 Mepo-Chr1 33017715 33021481 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02980 416 544 Receptor kinase-like Gene Family AT4G23250 46.565 1.31e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g02980 PK_Tyr_Ser-Thr 2.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02980 - - psat:127086248 651.358