Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02947 ATGGAAATGGAAGACGATGGAAGGGACGTGGAGCACATGGGTAAGGAGGAAGATAGAATAATAATATCATCAAGATCTTCATCTGGTGGGTTGACATTGAGAGAGCCTCTCCTTGTGAAGAATAATAACAGACTCAATACTACCTCCCAGGTCGCCATTGTTGGAGCCAATGTGTGTCCAATTGAAAGTCTTGACTACGAGATCGTTGAGAATGATCTATTCAAGCAAGACCGAAGGCTTGGAGCAAAAGCTGAGATTGTGCAGTATGCCATCCTCAAATGGACTTTTGCACTTCTTATTGGTTTAGGCACAGGTCTTGTTGCCTTCTTCAATAACATTGGTGTTGAGAATATCGTTGGTTTCAAGCTTCTCCTCACCAACCATCTCATGCTTAAGCATAAGTATCATCAGGCCTTTGCACTGTATGTTGGTTGTAACATGGTTTTAGCCATTGCTGCAACAGCCCTATGCGCCTATGTCGCCCCTGCAGCAGCAGGATCTGGCATACCTGAGGTCAAGGCATATCTTAATGGCGTTGATGCTCCTTCTATATTGGCCCCACCTACCCTCTTTGTAAAGATTTTTGGCTCAATTTTCGGGGTTGCAGCTGGTTTTGTTGTGGGTAAGGAAGGACCTATGGTGCATACCAGTGCTTGCATAGGAAATCTACTTGGACAAGGTGGTTCCAAAAAATATGGACTGACCTGGAAAGGGTTCAGATATTTTAAAAATGACAGAGATCGAAGGGATTTGATCACATGTGGTGCGGCTGCTGGCGTTGCTGGCGCCTTCCGTGCCCCAGTTGGTGGTGTCCTTTTTGCACTTGAAGAAGCAGCTTCTTGGTGGAGAAGTGCTCTTATGTGGAGAACATTTTTTACTACAGCTGTAGTAGCTGTGGTGCTGAGAGGTTTTATGGAATATTGCAAAGGGGGAACCTGCGGTCTTTTTGGGGAAGGAGGTTTGATAATGTTTGATGTTAATTCAGTAAAGCCTGCATACAGCATACCTGATCTACTAGTAGTTATATTTCTTGGAGTTATTGGAGGTCTCTTAGGAAGCCTTTATAATTATCTTGTGGATAAGGTCCTTCGCACTTACAACGTCATTAATGAGAAAGGCCCTATATTTAAAATAATACTTGTGATGATTATATCATTTTTGACCTCTTGTTGTTCATTTGGGGTTCCATGGCTATCAAAGTGCATCCCTTGTCCTCCTCATGTGAGGGATCAGTGCCCAACCGTAGGGCATTCTGGACACTACAAGAATTTCCAGTGTCCTCCTAATCACTACAATGACCTCGCTTCTCTCTTTTTTACTACCAACGATGATGCTATCCGCAACCTCTTTATTGCTGGCTCTTACAAAAGATTCCAGCTATCCAGTCTCTTGATATTCTTTGTGGCAATATACTTCCTTGGAATCATCACTTATGGCATCGCAATTCCCTCAGGGTTGTTTATTCCAGTGATACTAGCAGGGGCTTCATATGGGCGTGTTGCTGGAAGTTTGTTAAGTCCATTTACAGTTCTGGATGTGGGTTTGTTTGCACTCTTGGGAGCTGCATCCTTCCTTGGTGGCACAATGAGAATGACCGTCTCTCTGTGTGTCATACTTCTTGAACTTACTAACAACCTCCTCATGCTACCATTGGTCATGTTGGTTCTCCTCATCTCAAAGTCTGTGGCAGATTGTTTTAACAAAGGTGTTTATGATCAAATAGTGGAAATGAAGGGGTTGCCTTATTTGGAAGTGCATGCAGAACCGTACATGAGGCATTTAGTTGCGGGTGATGTTGTTTCTGGTCCATTGTTTACATTCTCTAGTATTGAAAAAGTGGGGAATATTGTGTACACTTTAAAGGTGACGCGACATAATGGGTTTCCTGTGATTGATGAGCCTCCATTCTCAGAAGCTTCGGAGTTATGTGGGTTGGTTTTGAGGTCTCATTTGCTTGTAATTCTTAAACATAAGGCATTTATGACGAGGCCAAGTGAGAGGTCCTTGATTATGAACAAGTTGGGGGCACGTGACTTTGGAAAGCCAGGTTCGGGGAAAGGGATAAGACTGGATGATTTAGAGATATCAGAGGAAGAGATGGAAATGTATGTTGATATGCATCCAATTACCAACAAGTCATCATATACGGTTGTGGAAACAATGTCTCTAGCTAAAACTGCAGTTCTTTTCCGTGAGCTTGGCCTCAGGCATTTGTTGGTGGTGCCAAAGACATCTGGAAGACCTCCAATTGTGGGGATCTTGACAAGGCACGACTTCATGGCCGAGCATATATTGGGACTATACCCCCATTGCAACCCCCGCAAGTAA 2328 0.436 MEMEDDGRDVEHMGKEEDRIIISSRSSSGGLTLREPLLVKNNNRLNTTSQVAIVGANVCPIESLDYEIVENDLFKQDRRLGAKAEIVQYAILKWTFALLIGLGTGLVAFFNNIGVENIVGFKLLLTNHLMLKHKYHQAFALYVGCNMVLAIAATALCAYVAPAAAGSGIPEVKAYLNGVDAPSILAPPTLFVKIFGSIFGVAAGFVVGKEGPMVHTSACIGNLLGQGGSKKYGLTWKGFRYFKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALMWRTFFTTAVVAVVLRGFMEYCKGGTCGLFGEGGLIMFDVNSVKPAYSIPDLLVVIFLGVIGGLLGSLYNYLVDKVLRTYNVINEKGPIFKIILVMIISFLTSCCSFGVPWLSKCIPCPPHVRDQCPTVGHSGHYKNFQCPPNHYNDLASLFFTTNDDAIRNLFIAGSYKRFQLSSLLIFFVAIYFLGIITYGIAIPSGLFIPVILAGASYGRVAGSLLSPFTVLDVGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKSVADCFNKGVYDQIVEMKGLPYLEVHAEPYMRHLVAGDVVSGPLFTFSSIEKVGNIVYTLKVTRHNGFPVIDEPPFSEASELCGLVLRSHLLVILKHKAFMTRPSERSLIMNKLGARDFGKPGSGKGIRLDDLEISEEEMEMYVDMHPITNKSSYTVVETMSLAKTAVLFRELGLRHLLVVPKTSGRPPIVGILTRHDFMAEHILGLYPHCNPRK 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02947 775 Pfam Voltage gated chloride channel 150 564 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo1g02947 775 PRINTS Plant CLC chloride channel signature 67 75 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo1g02947 775 PRINTS Plant CLC chloride channel signature 310 317 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo1g02947 775 PRINTS Plant CLC chloride channel signature 278 286 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo1g02947 775 PRINTS Plant CLC chloride channel signature 292 302 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo1g02947 775 PRINTS Plant CLC chloride channel signature 434 450 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo1g02947 775 SMART cbs_1 713 764 IPR000644 -
Mepo1g02947 775 SMART cbs_1 603 656 IPR000644 -
Mepo1g02947 775 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 40 765 - -
Mepo1g02947 775 Gene3D Clc chloride channel 85 583 - -
Mepo1g02947 775 ProSiteProfiles CBS domain profile. 706 774 IPR000644 -
Mepo1g02947 775 CDD ClC_6_like 62 583 - -
Mepo1g02947 775 CDD CBS_pair_voltage-gated_CLC_euk_bac 586 762 - -
Mepo1g02947 775 Gene3D - 584 765 IPR046342 -
Mepo1g02947 775 PRINTS Chloride channel signature 257 276 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo1g02947 775 PRINTS Chloride channel signature 514 530 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo1g02947 775 PRINTS Chloride channel signature 570 584 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo1g02947 775 PRINTS Chloride channel signature 482 502 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo1g02947 775 PRINTS Chloride channel signature 193 212 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo1g02947 775 PRINTS Chloride channel signature 532 551 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo1g02947 775 PRINTS Chloride channel signature 162 179 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo1g02947 775 SUPERFAMILY CBS-domain pair 587 761 IPR046342 -
Mepo1g02947 775 Pfam CBS domain 712 760 IPR000644 -
Mepo1g02947 775 FunFam Chloride channel ClC3 85 400 - -
Mepo1g02947 775 SUPERFAMILY Clc chloride channel 78 585 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02947 Mepo-Chr1 32241275 32244739 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02947 4 775 Ion Channels AT5G49890 73.779 0.0 1117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02947 K05016 - jre:108988922 1144.41