Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02944 ATGGAAAAATTCACATTGCATTGGGGTAATCGGATTCGAACCGAGGACTTTCACCACGTCAAGGATGATACAATCCTCTTGCTGCCTTTCTCCTCGGCCCACAGCGACAAAATGGAGGACTGGTGCCAACAGTTCATCACTAAGGATGACTTATCTGTCAACTTTTCCACGATTACCCCTAAAAAACCAAACTCTGCCTTACGTAAAGTTGCCAGAGTACGCTTAACCTCTGGATTTGAAATCACTGCTTATATACCCGGTATTGGCCATAATTTACAAGAACATTCTGTAGTCTTAGTAAGAGGGGGAAGGGTTAAGGATTTACCTGGTGTGAGATATCACATTGTTCGAGGAACCCTAGATGCTGTCGGAGTAAAGGATCGTCAACAAGGTCGTTCTAAATATGGGGCAAAAAAGCCAAAATAA 426 0.4319 MEKFTLHWGNRIRTEDFHHVKDDTILLLPFSSAHSDKMEDWCQQFITKDDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGAKKPK 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02944 141 ProSitePatterns Ribosomal protein S12 signature. 61 68 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mepo1g02944 141 SUPERFAMILY Nucleic acid-binding proteins 52 141 IPR012340 -
Mepo1g02944 141 CDD Ribosomal_S12 57 128 IPR005679 GO:0003735|GO:0006412|GO:0015935
Mepo1g02944 141 FunFam Ribosomal protein S12, mitochondrial 30 141 - -
Mepo1g02944 141 NCBIfam 30S ribosomal protein S12 48 141 IPR005679 GO:0003735|GO:0006412|GO:0015935
Mepo1g02944 141 Pfam Ribosomal protein S12/S23 51 141 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mepo1g02944 141 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 56 141 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mepo1g02944 141 PRINTS Ribosomal protein S12 signature 76 95 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mepo1g02944 141 PRINTS Ribosomal protein S12 signature 60 75 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mepo1g02944 141 PRINTS Ribosomal protein S12 signature 112 128 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mepo1g02944 141 PRINTS Ribosomal protein S12 signature 128 140 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mepo1g02944 141 PRINTS Ribosomal protein S12 signature 95 112 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mepo1g02944 141 Gene3D - 27 141 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02944 58 117 Cytoplasmic Ribosomal Protein Gene Family AT3G09680 44.118 1.00e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02944 K02950 - egt:105951191 183.726