Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02927 ATGGTTAATCTATTATCTGGTCTCTTTCTTTATACGCTTGCTCTGCATTGTTTTGTGGCTTCCTTTGCTGCAAATACGAAAAACATCACTACAGATAAATCTTCTCTTCTAGCATTCCAACTCCAAATTACTTCGGAACCCAATAATCTGTTGGCAAATAATTGGTCAACCACCTCTTCAGTATGCAGTTGGGTTGGTGTAACTTGCGATGACCGACACGGTAGAGTCCACAGTTTGAATCTCACAAACATGGGTCTTAGAGGTACTGTTTCCCCAAATCTGGGGAATCTATCTTTCCTTGTCACACTTGACCTCTCCCACAATACCTTTGTTGGTCAGTTTCCTAAAGAGATATGTCGGTTGCGCCGATTAAAGTTTCTTGAGATCAGCAATAACGAATTTAATGGAGGAGTTCCTACAAAGTTGGGGGACTTATCACAACTTCAACATTTGTATATTGCTGCTAACAATTTTAGTGGTTTAATCCCTCAATCTATCGGTAACCTTCGTGGGTTGACAATACTGGATGCTAGTAGCAACGGATTCTCTGGACACATACCTCAAACAATTTCAAACATGTCTTCACTTGAATATCTTCGTTTAGATATTAACTACTTTTCAGGGGAAATTCCAAAAGGGATCTTCGAGAATCTTACACATATGAAAACAATGGTACTTGGAAATAATAATCTTTTGGGCAGTCTTCCGTCAAATATTTGTCAAGGGCTTCCAAATATTACATATATTGATCTTAGTTATAATGGCCTTTCTGGTGACATGCCGAATGATTGGCATCAATGTAAAGAGATGGAAGGGTTGATTCTATCATACAACAATTTCAGCAGAGGACCCATTCCAGGTGACATCCGAAACATGACCAAACTTCAATATTTATATCTTGACGGAAACAACTTGGAGGATTTGTGTGGAATTGTTGGGAAAATTCCCCTAGAAGTCGGAAACATGAGCAACTTGATATATTTTTCTGTTTTTGGGAATAATATGACTGGACCAATACCTCGTACATTCAAAGGGTTGCCGAAACAAGTTCAGTATTTGGATCTTGGAATAAATAAACTACAAGGATCATTTATTGAGGAGCTTTGTGAAATGAAGAGTTTGGGTGAGTTGTATCTAGATAGTAATAATCTTTCTGGAGCTTTACCAACATGTTTTGGAAATATGACTTCTCTTATAAGAGTACACATAGGATATAACAGTTTCAGCTCAAGAGTACCTTTATCTCTTTGGAGTCTTAGAGATATATTAGAAGTAAATCTGTCTTCTAATGCTTTAACTGGTAATCTTCCACCCGAGATTGAGAATCTGAAAGCAATTATAATACTAGACCTATCAAGAAATCATATTTCAAGCAACATTCCAACAACCATCAGTTCGTTAAATACTTTGCAAAATCTCTCCTTAGCACATAATAGATTAAATGGATCAATTCCCACATCACTTGGTAACATGATAAGCTTGATATCCTTAGACATCTCCCAAAATATGTTAATTGGTATTATTCCAAAATCATTAGAATCACTTTTGTACCTTCGAAGCATCAACTTCTCGTATAATAGATTACAAGGAGAGATTCCTGATGGTGGACCTTTCAGGAATTTCACAGCTCAATCTTTTATGCATAATGGAGAACTTTGTGGAAATCTTCGCTTCCAAGTACCGCTTTGTGGTAAACATGATAAGAAAATGTCAATGGTAGAGAAGATATTGCTCAAATGCATACTTCCCATAGTTGTGTCAGCCATTTTGGTTGTTGCATGCATCATATATTTTAGACTCAAAAGAAAAAATGTTGAAAATATTGTTGAAAGGGGTTTATCAACCTTAGGAGTTCCAAGAAGAATATCATATTATGAACTTGTGCAAGCAACAAATGGATTCAATGAGAGCAATTTACTTGGAACGGGGGGCTTTGGCTCTGTGTATCAAGGGAAGCTTCCTGATGGTGAGATGATTGCAGTTAAAGTAATTGATTTTCAATCAAATAGCTTTGATGCAGAATGCAATGCAATGAGAAATCTACGACATCGAAATTTGGTTAAGATTATCAGCAGTTGTTCCAATCTTGATTTCAAATCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTGGACAAATGGTTATATTCAGATAACCATTGCTTAAATTTCTTGCAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGGAATATCTCCATCATGGTTCTTCAATAACCGTGGTTCATTGCGATCTAAAGCCTTCTAATGTCTTGTTGGATGAAAATATGGTTGCACATGTTAGTGATTTTGGTATTGCAAAGCTCATGGATGAAGGACAATCTAAAACTCATACACAAACTTTAGCTACTCTTGGATACCTTGCACCAGAGTATGGATCAAAGGGAACTATTTCTGTCAAAGGAGATGTGTACAGCTATGGGATTATGCTAATGGAAATCTTCACAAGGAGAAAGCCAACAGATGATATGTTTGTTGGAGAACTAAGTTTGAAGACATGGATCAATGGATCATTGCCTAATTCAATTATGGAGGTCTTAGATTCTAATTTAGTCCAACAATTTAGGGAAGAACTTGATGATATTTTGACTCACATGTCATCTATTTTTGGTTTAGCCATGCATTGTTGCGAATATTCACCTGAATCAAGAATTAATATGATAGATGTTATTTCGTCGCTAATCAAAATCAAGACTTTGTTTATTGGTGCAAAGGCTGTCTAG 2748 0.3628 MVNLLSGLFLYTLALHCFVASFAANTKNITTDKSSLLAFQLQITSEPNNLLANNWSTTSSVCSWVGVTCDDRHGRVHSLNLTNMGLRGTVSPNLGNLSFLVTLDLSHNTFVGQFPKEICRLRRLKFLEISNNEFNGGVPTKLGDLSQLQHLYIAANNFSGLIPQSIGNLRGLTILDASSNGFSGHIPQTISNMSSLEYLRLDINYFSGEIPKGIFENLTHMKTMVLGNNNLLGSLPSNICQGLPNITYIDLSYNGLSGDMPNDWHQCKEMEGLILSYNNFSRGPIPGDIRNMTKLQYLYLDGNNLEDLCGIVGKIPLEVGNMSNLIYFSVFGNNMTGPIPRTFKGLPKQVQYLDLGINKLQGSFIEELCEMKSLGELYLDSNNLSGALPTCFGNMTSLIRVHIGYNSFSSRVPLSLWSLRDILEVNLSSNALTGNLPPEIENLKAIIILDLSRNHISSNIPTTISSLNTLQNLSLAHNRLNGSIPTSLGNMISLISLDISQNMLIGIIPKSLESLLYLRSINFSYNRLQGEIPDGGPFRNFTAQSFMHNGELCGNLRFQVPLCGKHDKKMSMVEKILLKCILPIVVSAILVVACIIYFRLKRKNVENIVERGLSTLGVPRRISYYELVQATNGFNESNLLGTGGFGSVYQGKLPDGEMIAVKVIDFQSNSFDAECNAMRNLRHRNLVKIISSCSNLDFKSLVMEFMSNGSVDKWLYSDNHCLNFLQRLNIMIDVASALEYLHHGSSITVVHCDLKPSNVLLDENMVAHVSDFGIAKLMDEGQSKTHTQTLATLGYLAPEYGSKGTISVKGDVYSYGIMLMEIFTRRKPTDDMFVGELSLKTWINGSLPNSIMEVLDSNLVQQFREELDDILTHMSSIFGLAMHCCEYSPESRINMIDVISSLIKIKTLFIGAKAV 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02927 915 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 217 903 - -
Mepo1g02927 915 Gene3D Phosphorylase Kinase; domain 1 617 705 - -
Mepo1g02927 915 Gene3D Ribonuclease Inhibitor 283 571 IPR032675 -
Mepo1g02927 915 SMART serkin_6 634 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02927 915 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 71 308 - -
Mepo1g02927 915 SUPERFAMILY Protein kinase-like (PK-like) 616 902 IPR011009 -
Mepo1g02927 915 ProSitePatterns Serine/Threonine protein kinases active-site signature. 749 761 IPR008271 GO:0004672|GO:0006468
Mepo1g02927 915 Gene3D Transferase(Phosphotransferase) domain 1 706 909 - -
Mepo1g02927 915 SUPERFAMILY L domain-like 309 554 - -
Mepo1g02927 915 Pfam Leucine rich repeat 195 256 IPR001611 GO:0005515
Mepo1g02927 915 ProSiteProfiles Protein kinase domain profile. 634 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02927 915 Pfam Protein kinase domain 635 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02927 915 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Mepo1g02927 915 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 309 567 - -
Mepo1g02927 915 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 706 914 - -
Mepo1g02927 915 Gene3D Ribonuclease Inhibitor 215 282 IPR032675 -
Mepo1g02927 915 Gene3D Ribonuclease Inhibitor 31 142 IPR032675 -
Mepo1g02927 915 ProSitePatterns Protein kinases ATP-binding region signature. 640 662 IPR017441 GO:0005524
Mepo1g02927 915 Gene3D Ribonuclease Inhibitor 143 214 IPR032675 -
Mepo1g02927 915 SUPERFAMILY L domain-like 38 308 - -
Mepo1g02927 915 ProSiteProfiles Leucine-rich repeat profile. 294 315 IPR001611 GO:0005515
Mepo1g02927 915 Pfam Leucine Rich Repeat 493 515 IPR001611 GO:0005515
Mepo1g02927 915 Pfam Leucine Rich Repeat 147 169 IPR001611 GO:0005515
Mepo1g02927 915 SMART LRR_typ_2 193 217 IPR003591 -
Mepo1g02927 915 SMART LRR_typ_2 218 242 IPR003591 -
Mepo1g02927 915 SMART LRR_typ_2 443 467 IPR003591 -
Mepo1g02927 915 SMART LRR_typ_2 97 121 IPR003591 -
Mepo1g02927 915 SMART LRR_typ_2 292 314 IPR003591 -
Mepo1g02927 915 SMART LRR_typ_2 145 168 IPR003591 -
Mepo1g02927 915 SMART LRR_typ_2 371 394 IPR003591 -
Mepo1g02927 915 FunFam Serine-threonine protein kinase plant-type 615 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02927 Mepo-Chr1 31956890 31969713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02927 31 912 Receptor kinase-like Gene Family AT3G47570 34.008 6.88e-169 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo1g02927 Pkinase 4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02927 - K13420 mtr:25481440 1029.24