Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02899 ATGGTATCTGAATCCTCTAGCATCTCTTCCACTTCACGAGATCGAGGTGATTCTTCCCACTCAAAAAAACGGATGAACATGAAGGAGATTGAACAGATTCAATCCTCAAACTCAAAACTCGATAAACCTATTGATTTCATGAAGCTATCAAAAGAAGATTCAGTTCCCGTGTCAAAGGTGCAAGAGCACAATTTTTTTGGCCCTATTCGAATTGGTTCATCATCTGGTTTTCCTACCGACAACAATCAAGGAAAAGATGAGAACATCAATGAAGAGAAGAATTCAGATTCAAGATCCTTTTCATGCTCCTTTTGTAAGAGGCAATTTTCTACTTCACAAGCGTTGGGAGGACACCAGAACGCTCATAAGGCGGAACGTACTTTAGAAAAGCAACGGAAACAACGGTATGATGATGGTGTTTTAGGTTTAGGGCAATCTTACTTTAACCCTACTCTTTTTCGACCTTATGATTACAGATCACTCGGGGTTCAAACCGAGTCAATGATTCAAAAACCACCTTATTTTAGCCCTAAGATTACCCCACACAGTTTTGGGTACAGCCATAGTGCTTTGTTGCAAGAGATCTTAAATCCTTCTCTCGTGTCATTGAGAAATATGGGGGATGGTAATAGAGGGTTTGGAAACCTAGGTATTGGCGGTGCAACTACTTCAAGGATCAAAGATGGTACAAATAATAATAAAATTGGTGCTATTTTAAAATTGGGAGATTCTTCTACAAGTATTGCTACAAGTTCAAACTCAAACATAGAAAAGAAAATTATTGTGCCTCCTACTTCTTCCAAAGATGGTATTCATGATCTATCAAAGTCTAACAATGAAGAAGAACCTTCCGATTCTGGATCGTTTGAGCTAGATCTATCACTCAAGCTTTAA 894 0.3848 MVSESSSISSTSRDRGDSSHSKKRMNMKEIEQIQSSNSKLDKPIDFMKLSKEDSVPVSKVQEHNFFGPIRIGSSSGFPTDNNQGKDENINEEKNSDSRSFSCSFCKRQFSTSQALGGHQNAHKAERTLEKQRKQRYDDGVLGLGQSYFNPTLFRPYDYRSLGVQTESMIQKPPYFSPKITPHSFGYSHSALLQEILNPSLVSLRNMGDGNRGFGNLGIGGATTSRIKDGTNNNKIGAILKLGDSSTSIATSSNSNIEKKIIVPPTSSKDGIHDLSKSNNEEEPSDSGSFELDLSLKL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02899 297 MobiDBLite consensus disorder prediction 1 42 - -
Mepo1g02899 297 MobiDBLite consensus disorder prediction 15 29 - -
Mepo1g02899 297 SUPERFAMILY beta-beta-alpha zinc fingers 97 128 IPR036236 -
Mepo1g02899 297 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 2 297 IPR044246 GO:0009788
Mepo1g02899 297 MobiDBLite consensus disorder prediction 259 297 - -
Mepo1g02899 297 Gene3D Classic Zinc Finger 81 140 - -
Mepo1g02899 297 Pfam C2H2-type zinc finger 100 124 - -
Mepo1g02899 297 ProSitePatterns Zinc finger C2H2 type domain signature. 102 122 IPR013087 -
Mepo1g02899 297 ProSiteProfiles Zinc finger C2H2 type domain profile. 100 127 IPR013087 -
Mepo1g02899 297 MobiDBLite consensus disorder prediction 69 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02899 Mepo-Chr1 31460063 31460956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02899 89 172 C2H2 Transcription Factor Family AT5G10970 47.674 7.81e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02899 - - tpra:123915384 360.147