Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02898 ATGGCAGAAGAACAATTTCAAGCAAGTGGAAATTGGTGGGAGACACCAGCTAGAAACATAAGGTTTGAAAGTGTTGAACAACAACAACAACAATCTTCTTCCTTTGGAGGATGGCATCAGCAACAACAACAACATCATGATACTATGTCTGCTTCGGGTAGTTCCTCCGTGGTTTTCCATGATACTACTCAAAAGCTTCAACCTTCAGATTCTTCAACTTCAAACAATGACTCCAACTTGCATATGATGGGTTTAGGACTTTCTTCTCAAAACATTGATTGGAATCAAGCATCTATACTAAGAAATGAGAAGGCTTCAGAAGGTAGTTTCAGGTCTATGCTTCAAGAGAATTTGAACTCAACAGGCACAAATTTTGAGCAAGAAACTAGTGGAATTGGAATTGGAGTTGGACTGTCTAATCAAGTTAATTGGAGACAAGAAAAGTTATTCTCTAATGAATCTTCAAGCAATGAGTTCAAGCAAGTGAATAGAGGTTTCTCTTTAGATCAACCACAGTTTAGTCCTCAATATAGTTCTGGAGATAGTAACATGATAAGCCAAATGGATTCTTCAGCTTTATATGGTAACCCTTCAATGTTACAAGGACTTTTAGGAACTGAAACAAATCAAATTCAACCTCAACATGGTAATTCATTCGAGAATCGTTCCATGAATTTTCCATACTCATCAACAAGCTATGGCTTGAGTACAAATGAGTTAATTCCTTCTTGGTCTAAAGTATCTCATCAAAATCAAAAACAACATCAACAACCAAACAACCAATTGCATTTCACCAATAATGCTCCCTTTTGGAATGCTTCAGAGACTACTATTAAGGATGCTTCATCCAGCTTCTTGCCCCCATTCACAACACCAAATTTTGGTGCACAAACAAAGAATATATCTGAAGGTAGGGACTCAAGTGCTATGGTGAAAAAAAGTGGGAGTGAGCCTGCTCCAAAAAGGTCCAAAAATGAAAACCCATCACCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTTCAACAATTGGTTTCACCTTTTGGAAAGACTGATACAGCCTCAGTGCTATCTGAAGCAATTGAATATATCAAGTTTCTCCATGAACAAGTGACTGTTTTAAGCACCCCATATATGAAAAGTGGAGCTCCAATCCAGCATCAACAGAGTTCTGGTAAATCTAAGGAAGCAGATGGTCCAAAGCAGGATCTTAGAAGCAGAGGGCTATGTTTAGTACCAGTTTCTAGTACATTTCCAATGACTCATGAACCCACAGTTGAATATTGGACACCAACATTTGGAGGAACTTTCAGATAA 1338 0.3834 MAEEQFQASGNWWETPARNIRFESVEQQQQQSSSFGGWHQQQQQHHDTMSASGSSSVVFHDTTQKLQPSDSSTSNNDSNLHMMGLGLSSQNIDWNQASILRNEKASEGSFRSMLQENLNSTGTNFEQETSGIGIGVGLSNQVNWRQEKLFSNESSSNEFKQVNRGFSLDQPQFSPQYSSGDSNMISQMDSSALYGNPSMLQGLLGTETNQIQPQHGNSFENRSMNFPYSSTSYGLSTNELIPSWSKVSHQNQKQHQQPNNQLHFTNNAPFWNASETTIKDASSSFLPPFTTPNFGAQTKNISEGRDSSAMVKKSGSEPAPKRSKNENPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQHQQSSGKSKEADGPKQDLRSRGLCLVPVSSTFPMTHEPTVEYWTPTFGGTFR 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02898 445 Gene3D - 335 396 IPR036638 GO:0046983
Mepo1g02898 445 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 325 374 IPR011598 GO:0046983
Mepo1g02898 445 SMART finulus 336 380 IPR011598 GO:0046983
Mepo1g02898 445 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 106 426 - -
Mepo1g02898 445 MobiDBLite consensus disorder prediction 289 333 - -
Mepo1g02898 445 MobiDBLite consensus disorder prediction 24 84 - -
Mepo1g02898 445 CDD bHLH_AtbHLH_like 331 382 IPR045239 -
Mepo1g02898 445 MobiDBLite consensus disorder prediction 389 413 - -
Mepo1g02898 445 FunFam Transcription factor bHLH123 family 335 397 - -
Mepo1g02898 445 MobiDBLite consensus disorder prediction 289 309 - -
Mepo1g02898 445 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 335 392 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02898 Mepo-Chr1 31341934 31345408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02898 101 445 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 44.961 5.81e-73 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02898 - - gmx:100818424 563.918