Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02885 ATGGATCTTCTGCGCAACGCTTATTCGAATTCCTCAGACGAAGATGAAGACAAAGAAAAACCCAAACGATTGAAATCATCTCACACTCCTTCATACCCACCAAAACCCTATCTCTCTTCTCCTTCTCTCATTCTTCCAGGTAGCTATGTTTCAAAACGACAACGCGCATCTTCATCTTCCATCATCTCTACTACTACTCTTTCTTCGTCACAATCGTCTTCTTTCACACTCTCTGGTAGTATCTCGGAGGCTGATATACCCCATAACATTGTAGCATTGTTGAAATGTAAAGCAAAGGGTCATCAAAACCTGAACTCGGTACCTGACAAGCTATCTGCAACTCTATCTGAACATACTAGAGCTGTCAATGCTATACATTGGTCATCAACTCATGCTCACCTCCTTGCATCTGCTGGAATGGACAATGTGGTTTTCATATGGAACGTATGGAGCAATGATAAGAAGAAAGCATGTGCGCTAAATTTCCACAATGCAGCAGTGAAAGATGTGAAATGGTCTCAGCAAGGGCACTTCTTACTTTCTTGTGGATATGATTGCACATCAAGGTTGGTTGATGTTGAAAAGGGGATGGAAACTCAGGTTTTCAGAGAAGATCAAATTGTAGGAGTTATAAAGTTCCATCCAGACAATTCAAGTCTCTTCCTTTCTGGGGGATCAAAGGGCCATATCAAGCTATGGGATATCAGAACTGGCAAAGCTGTGCATAACTATAATCGAAATTTAGGTTCTATTCTAGATGTTGAGTTTGCAACAAATGGGAAGCAATTCATTTCTTCAAGTGATGTATCTGGGAGCAATATCAGTGAGAATTCTATTATCGTTTGGGATGTGTCAAGACAGGTACCATTGTCTAATCAGGTTTATGTGGAAGCTTATACTTGTCCTTGCATTAGAAGCCACCCCTCTGATCCAGTTTTTGTTGCGCAGTCAAACGGGAATTATGTTGCAATCTTTAGTACCACCCCACCATACAGACTCAACAAATATAAGAGATATGAGAACCATGGGGTTTCTGGGTTCCCGATTAAGTGCAATTTCAGCTTAGATGGGAAGAAGCTTGCATCTGGCTCTTCAGATGGATCTATTTACCTTTATGATTATCAGTCATCCAAAGTTTTGAAGAAAATAAAGGCCTTTAACCAAGCTTGCATGGACATTGCCTTCCACCCAGTTATGCCTAATGTTATTGCTTCATGCTCATGGGATGGAAGTATTTTGGTATTTGAGTAG 1251 0.4069 MDLLRNAYSNSSDEDEDKEKPKRLKSSHTPSYPPKPYLSSPSLILPGSYVSKRQRASSSSIISTTTLSSSQSSSFTLSGSISEADIPHNIVALLKCKAKGHQNLNSVPDKLSATLSEHTRAVNAIHWSSTHAHLLASAGMDNVVFIWNVWSNDKKKACALNFHNAAVKDVKWSQQGHFLLSCGYDCTSRLVDVEKGMETQVFREDQIVGVIKFHPDNSSLFLSGGSKGHIKLWDIRTGKAVHNYNRNLGSILDVEFATNGKQFISSSDVSGSNISENSIIVWDVSRQVPLSNQVYVEAYTCPCIRSHPSDPVFVAQSNGNYVAIFSTTPPYRLNKYKRYENHGVSGFPIKCNFSLDGKKLASGSSDGSIYLYDYQSSKVLKKIKAFNQACMDIAFHPVMPNVIASCSWDGSILVFE 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02885 416 ProSiteProfiles Trp-Asp (WD) repeats profile. 353 382 IPR001680 GO:0005515
Mepo1g02885 416 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 115 149 - -
Mepo1g02885 416 Pfam WD domain, G-beta repeat 341 373 IPR001680 GO:0005515
Mepo1g02885 416 Pfam WD domain, G-beta repeat 211 234 IPR001680 GO:0005515
Mepo1g02885 416 Pfam WD domain, G-beta repeat 162 190 IPR001680 GO:0005515
Mepo1g02885 416 Pfam WD domain, G-beta repeat 112 148 IPR001680 GO:0005515
Mepo1g02885 416 Gene3D - 92 416 IPR015943 GO:0005515
Mepo1g02885 416 ProSiteProfiles Trp-Asp (WD) repeats profile. 201 243 IPR001680 GO:0005515
Mepo1g02885 416 ProSiteProfiles Trp-Asp (WD) repeats profile. 160 201 IPR001680 GO:0005515
Mepo1g02885 416 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 17 416 - -
Mepo1g02885 416 ProSitePatterns Trp-Asp (WD) repeats signature. 135 149 IPR019775 -
Mepo1g02885 416 MobiDBLite consensus disorder prediction 9 26 - -
Mepo1g02885 416 SUPERFAMILY WD40 repeat-like 101 415 IPR036322 GO:0005515
Mepo1g02885 416 ProSiteProfiles Trp-Asp (WD) repeats profile. 115 157 IPR001680 GO:0005515
Mepo1g02885 416 SMART WD40_4 237 283 IPR001680 GO:0005515
Mepo1g02885 416 SMART WD40_4 376 416 IPR001680 GO:0005515
Mepo1g02885 416 SMART WD40_4 195 234 IPR001680 GO:0005515
Mepo1g02885 416 SMART WD40_4 334 373 IPR001680 GO:0005515
Mepo1g02885 416 SMART WD40_4 153 192 IPR001680 GO:0005515
Mepo1g02885 416 SMART WD40_4 108 148 IPR001680 GO:0005515
Mepo1g02885 416 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02885 Mepo-Chr1 31117289 31130409 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02885 110 286 U-box Gene Family AT2G33340 24.725 2.83e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02885 K24742 - gmx:100790592 629.402