Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02881 ATGGTGATGCTAGAAGTTGCCAAGTGTACACCGTTTGTTCTTATTCTTTTACTAAACATCATATGTCAGGAGTCATTCGCGTCATTCCATCCCATCGATAATTATTTGGTCGCTTGTGGTTCTTCCCACAATGTCACGTTTCAGGGTCGAACTTTCGTACCTGACATTGAATTTGAACATTCCAACTTTCAAATAAAAGCAGAAAAATCTTCGGTTGCTACCTCTAAACTGAACAATACCCTTTCACTGCTTTATAACTCGGCTCGAATCTTCTTTGAAAAGGCATCCTATACATTCAAAATTCAACAACATGGGAGACACTGGATCCGTCTCCATTTTCACCCTTTACCCGATCCCAACCACAACATGACCTTTGCCTTAATAACGGTAATCGTTGATGGTTATGTGCTTCTTGATAACTTCACTTTTGCAAACTATAGTAACTCTCACTTGATGAAGGAGTATGCAATCAGTGTTACATCTTATGAATTGATTGTCACATTCATCCCTCACCGCAGTTCACTTGTTTTTGTTAATGCCATTGAAGTTGTAACTATGCCAGATGTGCTCTTTCCTGACAACCTAAATCCATCAACCCCTTTCACAGATTCCGTCCTTGAAACTGTGTATCGATTAAATGTAGGAGGCGCAAGTATCAATGCTCAAAATGACACGCTTAGTAGGAGTTGGGAGAGTGATGAAACTTACTTTCGCTCTACCACTATTGCGATGAATATTTCAACAAACACTTCTGCTATAAAGTATCCTGATTTCTTAGAAATTACAGCACCACCAATGGTTTATGCTACTGCTAAAGCCATGGGAAGTGCCTCAAGGGGTTACCGCTTAAATTGGGTATTTCGTGTAAGACCAAACTTACTTTATTTTGTTCGCGTTCATTTCTGTGACATGATTAGCAACAGTACTAACTATATGGTTTTGGATCTATTTATGAATGATAACATTGAGTTTAGAAGTCTTGACCTGTTAAGAGTTTCTGGTGACTTTGCTGAACCATATTACAACGACGTTGTGTTCAATGCCACAGAGGAGATTCTCACAGTAAGTGTTGGTCCCGCAACAATGTCTACTATAGAAAATGCAACTTTGAATGGGATAGAGATAATGAAGTTCATTAACAGAGTTGACAGTGTTCTAACAAAATCTTCAGAAAGAATTCAAAGAAACAAGAAATTAAAATTAGTCATTATAATTGGATGTGGTCTATTTGTTTTAACAATTCTAGCATTTCTTGGACTATCATTTTGTTATCTAAAATCCTGCAGGTCCAAGAAAAATTCAGTAAATGCTTACGAATTTCTGAGGCATTTTACTTTGCATGAGATCCAACAAGCAACAAATAACTTTGATGCTGATCTGCTTACTGGAGCAGGAGGATTTGGAAAGGTGTATAAAGGAAAACTAGAAAATGGGAAAATAGTAGCCATCAAAGTAGCAAATCCTGAATCTAGACAAGGTCTCGGTGAATTCCATAACGAGATTGAGTTGTTGTCTGGTCTTCGTCATTCAAACCTTGTCTCTCTTGTAGGTTGTTGTAATGAAGACTCAGAACTGATTCTAGTGTACAATTACATGGCAAATGGATCTCTCAGTAGTCATCTTTATGGGAGAGACTTTGTTCCGCTGTCTTGGAAGCAACGTCTTGGGATAGGCATAGGGGCTGCGAAGGGACTTCTTTATCTTCACACTGGAGCTAAACAAAGCATAATTCACCGTGATGTGAAGACAACAAACATTCTCTTGGATGAAAACCTTGTGCCAAAAGTTGCTGATTTTGGCATATCAAAAAAGGGTCCTCTTCTTGATAAGAGCCATGTTACAACCCATGTAAAGGGTAGCTTCGGCTATCTTGATCCAGAATATTTTAGGACTAAGTTTCTTACCAAGAAATCAGATGTTTACTCGTTCGGGGTGGTGTTGCTTGAAGTTATATGTGGGAAGCCTGCTCTAGATGACGCCCTTCCAACGCAGCAGATGAATTTGGCATTGTGGGCAATAAGCTGCAATAAAAAGGGTACTTTTCATGAAATGATGGACCCATATTTGACTGGCAAAGTGAATATGGAGTCAGTAAACAAGGTTTTAGAGTTGGCTTGGAAATGCTTGGAGGAGCGTCGGGCGAACAGACCATCAATGGGGTACATATTATGTCAACTAGAAGAGGCTCTCCATCTTGAGTTGGCATCAGATGTTTTGAATAACAATAAAAATGGGGATTCTTCTACTTATGCCAGTGTAGGAAATGGATTTATAGATGACACAGAAGATGTTGTATGA 2298 0.389 MVMLEVAKCTPFVLILLLNIICQESFASFHPIDNYLVACGSSHNVTFQGRTFVPDIEFEHSNFQIKAEKSSVATSKLNNTLSLLYNSARIFFEKASYTFKIQQHGRHWIRLHFHPLPDPNHNMTFALITVIVDGYVLLDNFTFANYSNSHLMKEYAISVTSYELIVTFIPHRSSLVFVNAIEVVTMPDVLFPDNLNPSTPFTDSVLETVYRLNVGGASINAQNDTLSRSWESDETYFRSTTIAMNISTNTSAIKYPDFLEITAPPMVYATAKAMGSASRGYRLNWVFRVRPNLLYFVRVHFCDMISNSTNYMVLDLFMNDNIEFRSLDLLRVSGDFAEPYYNDVVFNATEEILTVSVGPATMSTIENATLNGIEIMKFINRVDSVLTKSSERIQRNKKLKLVIIIGCGLFVLTILAFLGLSFCYLKSCRSKKNSVNAYEFLRHFTLHEIQQATNNFDADLLTGAGGFGKVYKGKLENGKIVAIKVANPESRQGLGEFHNEIELLSGLRHSNLVSLVGCCNEDSELILVYNYMANGSLSSHLYGRDFVPLSWKQRLGIGIGAAKGLLYLHTGAKQSIIHRDVKTTNILLDENLVPKVADFGISKKGPLLDKSHVTTHVKGSFGYLDPEYFRTKFLTKKSDVYSFGVVLLEVICGKPALDDALPTQQMNLALWAISCNKKGTFHEMMDPYLTGKVNMESVNKVLELAWKCLEERRANRPSMGYILCQLEEALHLELASDVLNNNKNGDSSTYASVGNGFIDDTEDVV 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02881 765 ProSiteProfiles Protein kinase domain profile. 456 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02881 765 FunFam receptor-like protein kinase FERONIA 424 531 - -
Mepo1g02881 765 Gene3D Transferase(Phosphotransferase) domain 1 532 749 - -
Mepo1g02881 765 Pfam Protein tyrosine and serine/threonine kinase 463 725 IPR001245 GO:0004672|GO:0006468
Mepo1g02881 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 576 588 IPR008271 GO:0004672|GO:0006468
Mepo1g02881 765 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 226 728 - -
Mepo1g02881 765 CDD STKc_IRAK 463 728 - -
Mepo1g02881 765 Gene3D Phosphorylase Kinase; domain 1 423 531 - -
Mepo1g02881 765 SMART serkin_6 456 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02881 765 FunFam Putative receptor-like protein kinase 34 187 - -
Mepo1g02881 765 Pfam Malectin-like domain 38 377 IPR024788 -
Mepo1g02881 765 Gene3D - 34 186 - -
Mepo1g02881 765 Gene3D - 205 379 - -
Mepo1g02881 765 SUPERFAMILY Protein kinase-like (PK-like) 433 726 IPR011009 -
Mepo1g02881 765 FunFam Receptor-like protein kinase FERONIA 532 748 - -
Mepo1g02881 765 FunFam Receptor-like protein kinase FERONIA 205 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02881 Mepo-Chr1 31071539 31073836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02881 27 735 Receptor kinase-like Gene Family AT2G21480 43.026 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mepo1g02881 Malectin_like 1.2e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02881 - - tpra:123883851 993.03