Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02861 ATGGAAGAGAGAAATGGTACTTGTGAGAAACTTGAAGAGGTTATGCTTCCAGGGTTTAGGTTTCATCCAACTGATGAAGAACTTGTTGGATTTTACCTAAAGAAAAAGATTCAGCAACGCCCTCTTGCTATTGAGCTCATCAAGCAGCTTGATATTTATAAATTTGATCCATGGGATCTACCAAAGTTGGCAAGTACAGGGGAGAAAGAGTGGTATTTCTACTGTCCAAGAGACAGAAAATACAGGAACAGTGCAAGACCTAATAGGGTAACAAGAGCTGGGTTTTGGAAAGCAACAGGAACAGACAGACCTATTTATTCCTCAGAGGGTTCTAAATGTATTGGCTTGAAAAAATCCTTAGTTTTCTACAAAGGTAGAGCTGCCAAAGGAGTCAAAACTGATTGGATGATGCATGAGTTTAGACTACCTTCTCTCATAGATTCATCATCATCTCCAAAGAAATATGTAGACAAGACCATTCCGGCAAATGAATCTTGGGCAATATGCAGGATATTCAAGAAAACCAATGCAACAGCTCAAAGAGCTCTCTCTCACTCATGGGTCCCTCCTTTACTTGAAACATCAACCTCTAATGTTCTAACAAATGATGGAAACAACCAATTTTGTTCATCAAACATGATGTTAACAAAGAAACCTAGCTTTGCAAGTCACACTAGTACTAATAATAACCACAATAACCTAACACAACACTTAACCTCTTCTAGTAGTACTACACTTTGTCCCTTAGATGTTCCATCTTATAATAATCCAATTATTGATCCATTGATTTACAAACCCTTATACCGGTTACCAATTTCAAATGATCAAGATCTTAACCTTAGCACTGGCTTAGTATTTTCATCTCCACTTGAAACATCTTGTAACAAAACTTCAATGGATTTTTCTTCCTTGCTATTAGGTATGTCATCTGAAGTAACAACTTCAAACTACATTGGTAATTTACAAGACCATTACAATAATGGGTATCCATTAATGGCTAACATTCCTAATGGGAACGTGCCTCGTGTCGATGATCAACAAGAGTTGGATACGGTTCGACCCATTGGATTCCCATTCAGTGTGCCTCTCAATATTGGTGATGCATGGAAGTCATCAAGTCTTGTTTGGGATACTTCCTCTTGTACTTCTGATGAACCCTCTAGTTATTCTACTACCAAGTGTTATACTTAG 1191 0.3778 MEERNGTCEKLEEVMLPGFRFHPTDEELVGFYLKKKIQQRPLAIELIKQLDIYKFDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLIDSSSSPKKYVDKTIPANESWAICRIFKKTNATAQRALSHSWVPPLLETSTSNVLTNDGNNQFCSSNMMLTKKPSFASHTSTNNNHNNLTQHLTSSSSTTLCPLDVPSYNNPIIDPLIYKPLYRLPISNDQDLNLSTGLVFSSPLETSCNKTSMDFSSLLLGMSSEVTTSNYIGNLQDHYNNGYPLMANIPNGNVPRVDDQQELDTVRPIGFPFSVPLNIGDAWKSSSLVWDTSSCTSDEPSSYSTTKCYT 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02861 396 Gene3D NAC domain 24 179 IPR036093 GO:0003677|GO:0006355
Mepo1g02861 396 SUPERFAMILY NAC domain 13 174 IPR036093 GO:0003677|GO:0006355
Mepo1g02861 396 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Mepo1g02861 396 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 230 - -
Mepo1g02861 396 FunFam NAC domain-containing protein 35 24 177 - -
Mepo1g02861 396 ProSiteProfiles NAC domain profile. 15 174 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02861 Mepo-Chr1 30636133 30638583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02861 1 262 NAC Transcription Factor Family AT1G26870 61.314 1.24e-108 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo1g02861 NAM 7.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02861 - - vra:106768003 501.901