Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02839 ATGAAGTTAGTGAAAGAAGATAGGTTAAAAAGATCGGGTCATTATGTTGGTTTTTCCGATTTGTTATCAAGGCAAAAAGATGGGGCTTTTGAGCATATTCCTAAGAAGATTGCAATTCAAAGTATGTATGTGAATCAGTCAAAAATTCAAATAGTTGATGATGAAACTGGAGAAGAATATGAATGTGAAGTTCGTGATACAGGAAGTTGGATGGAGAAATACGTTGGAAGCGGATGGTTTGATTTTGTTATGGCAAAAGAACTCAAAGCTGGAGATTCCTTGTTCTTCACTATTGATAATCCTCCACACAAATTATTTGTATCAGTGATTAGATAA 336 0.3423 MKLVKEDRLKRSGHYVGFSDLLSRQKDGAFEHIPKKIAIQSMYVNQSKIQIVDDETGEEYECEVRDTGSWMEKYVGSGWFDFVMAKELKAGDSLFFTIDNPPHKLFVSVIR 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02839 111 Gene3D - 14 111 IPR015300 -
Mepo1g02839 111 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 32 111 - -
Mepo1g02839 111 SUPERFAMILY DNA-binding pseudobarrel domain 31 106 IPR015300 -
Mepo1g02839 111 CDD B3_DNA 33 111 IPR003340 GO:0003677
Mepo1g02839 111 Pfam B3 DNA binding domain 32 111 IPR003340 GO:0003677
Mepo1g02839 111 ProSiteProfiles B3 DNA-binding domain profile. 33 111 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02839 Mepo-Chr1 30315000 30315809 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo1g02839 B3 7.3e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02839 - K09287 mtr:120578430 90.1225