Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02799 ATGTCATCACTCACAGATTTGGAAGTTGATCAGAATATCCTCTCAGGCACAATTCCATCAAATACGGGATATAGCCTTCCTAGCCTGCAATATCTATACTTGAATGATAACAATTTTGTTGGAAATATTCCAAATACTATACTCAACTCTTCTAATCTTATTCATTTTCAATTGTATTCGAATGCATTCAGTGGAACTCTACCCAATATTGCTTTTGGAGATTTAAGATTCCTTGAATCGCTATTCATATATAACAACAATTTGACAATCGGAGATTCTCATCAATTCTTTACTTCCTTGACAAATTGTAGATATTTGAAATATCTATACTTATCAGGGAATCATATACCAAATCTTCCTAAGTCAATTGGAAACATAACTTCAGAATACATCAGGGCAGAATCATGTGGAATTGGATCTAACAGTCTGAACTCTAAGATACCTTCCTCTCTTTGGAGTGTCATAGATATCTTAGAGGTAGATTTGTCCTCTAATGCCTTCATTGGTAATCTTCCACCTGAGATTGGGAATTTGAGAGCAATTATACTATTAGACCTATCAAGAAATCAGATTTCAAGCAACATTCCAACAACCATTAGTTCCTTACAAACATTGCAGAATCTCTCCTTGGCAGATAATAAACTGAATGGTTCGATTCCCAAATCACTTGGTCAAATGATAAGCTTGATCTCTTTGGACTTGTCCCAAAATATGTTAACTGGTGTTATTCCAAAATCCTTAGAATCACTTGTGTCTCTTCAAATCATCAACTTCTCATATAATAGATTACAAGGAGAGATTCCTGATCGTGGACATTTCAAAAATTTCACAGCTCAATCATTTATGCATAATGATGCACTTTGCGGCGATCCTCGCCTCCTAGTACCTCCATGTGGTAAGCAAGTTGAGAAATGGTCAATGGAAAAAAAGCTTATATTGAAATGCATACTTCCCATTGTTGTGTCAGCCATTTTGATTGTTGCTTGCATCATACTTTTAAAACAAAATAAAAGGAGAAAGAACAAAACTACTCTTGAAAGAGGTTTGCCAACTTTGGGAGCTCCAAGTAGAATATCCTATTATGAACTTGTGCAAGCAACTAATGGATTCAATGAGAGTAATTTCCTTGGAAGGGGGGGATTTGGCTCTGTTTATCAAGGGAAGCTTCTTGATGGTGACATGATTGCAGTTAAAGTAATTGATTTGCAATCAGAGGCAAAATCAAAGAGCTTTGATGCAGAATGCAAGGCAATGAGAAATCTACGACATCGAAATCTGGTAAAGATTATCAGTACATGCTCAAATCTTGATTTCAAATCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTAGACAAATGGTTATATTCAAATAACTATTGTCTAAATTTCTTACAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGGAATATCTTCATCATGGTTCTTCAATACCAGTGGTTCATTGTGATCTAAAGCCTTCCAATGTCTTGTTGGATGAAAATATGGTTGCACATGTTAGTGATTTTGGTATTGCCAAGCTCATCGATGAAGGACAATCTCAAACTCATACACAAACTTTAGCTACTATTGGATACCTTGCACCAGGAGATGTGTACAGCTATGGGATTATGCTAATGGAGATCTTCACAAGAAAAAAGCCAACAGATGATATGTTTGTTGCAGAACTAAGCTTGAAGACATGGATCAGTGGATCATTGCCTAATTCAATTATGGAGGTCATGGATTCAAATTTAGTCCAAATAACTGGGGACCAAATTGATGATATATCGACTCACATGTCATCTATTTTTAGTTTAGCCCTGAGTTGTTGTGAAGATTCACCTGAAACAAGAACCAATATGGCAGATGTTATTGCGTCGCTAATCAAAATCAAGGCTTTTGTAGAAGTGGAGTTTTCAATATTGTTTTTGGATTGA 1947 0.3559 MSSLTDLEVDQNILSGTIPSNTGYSLPSLQYLYLNDNNFVGNIPNTILNSSNLIHFQLYSNAFSGTLPNIAFGDLRFLESLFIYNNNLTIGDSHQFFTSLTNCRYLKYLYLSGNHIPNLPKSIGNITSEYIRAESCGIGSNSLNSKIPSSLWSVIDILEVDLSSNAFIGNLPPEIGNLRAIILLDLSRNQISSNIPTTISSLQTLQNLSLADNKLNGSIPKSLGQMISLISLDLSQNMLTGVIPKSLESLVSLQIINFSYNRLQGEIPDRGHFKNFTAQSFMHNDALCGDPRLLVPPCGKQVEKWSMEKKLILKCILPIVVSAILIVACIILLKQNKRRKNKTTLERGLPTLGAPSRISYYELVQATNGFNESNFLGRGGFGSVYQGKLLDGDMIAVKVIDLQSEAKSKSFDAECKAMRNLRHRNLVKIISTCSNLDFKSLVMEFMSNGSVDKWLYSNNYCLNFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDENMVAHVSDFGIAKLIDEGQSQTHTQTLATIGYLAPGDVYSYGIMLMEIFTRKKPTDDMFVAELSLKTWISGSLPNSIMEVMDSNLVQITGDQIDDISTHMSSIFSLALSCCEDSPETRTNMADVIASLIKIKAFVEVEFSILFLD 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02799 648 SUPERFAMILY L domain-like 2 291 - -
Mepo1g02799 648 SMART LRR_typ_2 100 126 IPR003591 -
Mepo1g02799 648 SMART LRR_typ_2 250 275 IPR003591 -
Mepo1g02799 648 SMART LRR_typ_2 26 50 IPR003591 -
Mepo1g02799 648 SMART LRR_typ_2 226 249 IPR003591 -
Mepo1g02799 648 SMART LRR_typ_2 178 202 IPR003591 -
Mepo1g02799 648 PANTHER OS04G0122200 PROTEIN 1 131 - -
Mepo1g02799 648 SMART serkin_6 370 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02799 648 Gene3D Ribonuclease Inhibitor 1 306 IPR032675 -
Mepo1g02799 648 ProSitePatterns Protein kinases ATP-binding region signature. 376 398 IPR017441 GO:0005524
Mepo1g02799 648 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 172 294 - -
Mepo1g02799 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Mepo1g02799 648 ProSiteProfiles Leucine-rich repeat profile. 105 126 IPR001611 GO:0005515
Mepo1g02799 648 FunFam Serine-threonine protein kinase plant-type 352 445 - -
Mepo1g02799 648 Gene3D Transferase(Phosphotransferase) domain 1 446 642 - -
Mepo1g02799 648 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 446 642 - -
Mepo1g02799 648 Pfam Protein kinase domain 371 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02799 648 SUPERFAMILY Protein kinase-like (PK-like) 349 631 IPR011009 -
Mepo1g02799 648 Gene3D Phosphorylase Kinase; domain 1 354 445 - -
Mepo1g02799 648 Pfam Leucine rich repeat 204 263 IPR001611 GO:0005515
Mepo1g02799 648 ProSiteProfiles Protein kinase domain profile. 370 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02799 Mepo-Chr1 29798334 29800702 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02799 2 635 Receptor kinase-like Gene Family AT3G47570 36.256 9.90e-124 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo1g02799 Pkinase 1.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02799 - K13420 mtr:25481440 814.298