Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02796 ATGAAGAGTTTGGGTGAGTTGTATCTAGACAATAATAAGCTTTCTGGAGTTTTACCAACATGTTTGGGAAATATGACTTCTCTTAGAAATTTGTACATAGGATCTAACAATTTGAACACTAAGATACCTTCATCTCTTTGGGGTCTCACTGATATATTAACGATAGATTTGTCCTCCAATGCTTTTATTGGTGATCTTCCACTCGAGATTGGGAATTTGAAAGAACTTGTACTATTAGATCTATCAAGAAATCAAATTTCAAGCAACATTCCTATAACCATCAGTTCCTTAAAAAATCTGCAGAATCTCTCCTTAGCTCATAATAAATTGAATGGGTCAATTCCCACATCACTTGATGAAATGGTAAGCTTGGTCTTCTTGGACTTGTCCCAAAATATGCTAGCTGGTCTTATTCCAAAATCATTAGAATCACTATTGTACCTTCAATACATTAACTTCTCATATAATAAATTACAAGGAGAGATTCCTGATGGTGGTCCTTTCAAGAATTTCACTGCTCAATCATTTATGCATAATGATGCACTTTGCGGCGATCCTCGCCTCCTAGTACCTCCATGTGGTAAGCAAGTTGAGAAATGGTCAATGGAAAAAAAGCTTATATTGAAATGCATACTTCCCATTATTGTGTCAGCCATTTTGATTGTTGCTTGCATCATACTTTTAAAACATAATAAAAGGAGAAAGAACAAAACTACTCTTGAAAGAGGTTTGCCAACTTTGGGAGCTCCAAGAAGAATATCCTATTATGAACTTGTGCAAGCAACTAATGGATTCAATGAGAGTAATTTCCTTGGAAGGGGGGGATTTGGCTCTGTTTATCAAGGGAAACTTCTTGATGGTGAGATGATTGCAGTTAAAGTAATTGATTTGCAATCAGAGGCAAAATCAAAGAGCTTTGATGCAGAATGCAATGCAATGAGAAATCTACGACATCGAAATCTGGTTAAGATTATCAGTACTTGCTCAAATCTTGATTTCAAATCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTAGACAAATGGTTATATTCAAAAAACTATTGTCTAAATTTCTTCCAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGGAATATCTTCATCATGGTTCTTCAATACCAGTGGTTCATTGTGATCTAAAGCCTTCCAATGTCTTGTTGGATGAAAATATGGTTGCACATGTTAGCGATTTTGGTATTGCCAAGCTCATCGATGAAGGACAATCTCAAACTCATACACAAACTTTAGCGACTATTGGATACCTTGCACCAGAGTATGGATCTAAAGGAATTGTTTCTGTCAAAGGAGATGTGTACAGCTATGGGATTATGCTAATGGAAATCTTCACAAGAAGAAAGCCAACAGATGATATGTTTGTTGCAGAACTAAGCTTGAAGACATGGATCAGTGGATCATTGCCTAATTCAATTATGGAGGTCATGGATTCAAATTTAGTCCAAATAACTGGGGACCAAATTGATGTTATATCGACTCACATGTCATCTATTTTTAGTTTAGCCTTGAGTTGTTGTGAAGATTCACCTGAAGCAAGAACCAATATGGCAGATGTTATTGCGACGCTAATCAAAATCAAGGCTTTGGTTCTTGCTGCAAACAGGGTCTAA 1653 0.3606 MKSLGELYLDNNKLSGVLPTCLGNMTSLRNLYIGSNNLNTKIPSSLWGLTDILTIDLSSNAFIGDLPLEIGNLKELVLLDLSRNQISSNIPITISSLKNLQNLSLAHNKLNGSIPTSLDEMVSLVFLDLSQNMLAGLIPKSLESLLYLQYINFSYNKLQGEIPDGGPFKNFTAQSFMHNDALCGDPRLLVPPCGKQVEKWSMEKKLILKCILPIIVSAILIVACIILLKHNKRRKNKTTLERGLPTLGAPRRISYYELVQATNGFNESNFLGRGGFGSVYQGKLLDGEMIAVKVIDLQSEAKSKSFDAECNAMRNLRHRNLVKIISTCSNLDFKSLVMEFMSNGSVDKWLYSKNYCLNFFQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDENMVAHVSDFGIAKLIDEGQSQTHTQTLATIGYLAPEYGSKGIVSVKGDVYSYGIMLMEIFTRRKPTDDMFVAELSLKTWISGSLPNSIMEVMDSNLVQITGDQIDVISTHMSSIFSLALSCCEDSPEARTNMADVIATLIKIKALVLAANRV 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02796 550 Pfam Leucine rich repeat 3 61 IPR001611 GO:0005515
Mepo1g02796 550 Pfam Leucine rich repeat 75 134 IPR001611 GO:0005515
Mepo1g02796 550 FunFam Leucine-rich repeat receptor-like protein kinase 99 194 - -
Mepo1g02796 550 FunFam Leucine-rich repeat receptor protein kinase EMS1 1 93 - -
Mepo1g02796 550 Gene3D Phosphorylase Kinase; domain 1 248 340 - -
Mepo1g02796 550 ProSiteProfiles Protein kinase domain profile. 265 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02796 550 Gene3D Transferase(Phosphotransferase) domain 1 341 546 - -
Mepo1g02796 550 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 341 549 - -
Mepo1g02796 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 384 396 IPR008271 GO:0004672|GO:0006468
Mepo1g02796 550 SMART serkin_6 265 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02796 550 Pfam Protein kinase domain 266 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02796 550 SMART LRR_typ_2 73 97 IPR003591 -
Mepo1g02796 550 SMART LRR_typ_2 1 24 IPR003591 -
Mepo1g02796 550 SMART LRR_typ_2 121 144 IPR003591 -
Mepo1g02796 550 SMART LRR_typ_2 25 49 IPR003591 -
Mepo1g02796 550 FunFam Serine-threonine protein kinase plant-type 246 340 - -
Mepo1g02796 550 PANTHER OS04G0122200 PROTEIN 2 541 - -
Mepo1g02796 550 ProSitePatterns Protein kinases ATP-binding region signature. 271 293 IPR017441 GO:0005524
Mepo1g02796 550 Gene3D Ribonuclease Inhibitor 1 201 IPR032675 -
Mepo1g02796 550 SUPERFAMILY L domain-like 2 186 - -
Mepo1g02796 550 SUPERFAMILY Protein kinase-like (PK-like) 244 537 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02796 Mepo-Chr1 29770911 29772759 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02796 1 550 Receptor kinase-like Gene Family AT3G47570 39.168 1.67e-127 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo1g02796 Pkinase 5.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02796 - K13420 mtr:25502863 878.241