Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02785 ATGGATAGCGAAACAAGGAGCATGTGGATGGGTTCGATACCCGAGGAGATTGGCTATCTTGATAAACTTGAGAAACTGTTTTTGGGAAACAATAGCTTAAGTGGATCTATTCCTTCCAAAATCTTCAACATGTCATCACTCACTTATTTGGCGGTTGAACAGAATAGCCTCTCAGGCACAATTCCATCAAATACGGGATATAGCCTTCCTAACCTGCAATATCTACACTTGCATCAAAACAATTTTGTTGGAAATATTCCAAATAATATATTCAACTCTTCTAAGCTCCGTCAAATCGCATTGGAAGGAAATGCATTCAGTGGAATTGTTCCCAATGTTATTGGAAACTTAAGGTCTCTTGAATTGTTTTTCATACATGGCAACAATTTAAGAATAGAAGATTCTCATCAATTCTTTACTTCCTTGACAAATTGTAGATATTTGAAATATCTAGAGCTATCAGGGAATCATATACCCAATCTTCCTAAGTCAATTGGAAACCTAACTTCAGAAGTCTTCCTTACAGACTCATGTGGAATTGATGGTAATATTCCCCTAGAAGTTGGAAACATGACCAACTTGCTACGTTTTAATCTTTCTGGGAATAATATAACTGGAACAATACCTGGTACATTCAAAGAGTTGCAGAAACTTCAGTATTTGAGTCTTAGCTACAATGGACTACAAGGATCATTTATTGAAGAGTTTTGTGAAATGAAGAGTTTGGGTGAGTTGTATCTAAACAATAATAAGCTCTCCGGAGTTTTACCAACATGTTTGGGAAATATGACTTCTATTATAAGGTTATACATAAGATCTAACAGTCTGTACTCTAAGATACCTTCCTCTCTTTGGAGTCTTAGAGATATATTAGAGATAGATTTGTCCTCTAATGCCTTCATTGGTAATCTTCCACCTGAGATTGGGAATTTGAGAGCAATTATACTATTAGACCTATCAAGAAATCAGATTTCAAGCAACATTCCAACAACCATTAATTCCATACTAACATTGCAGAATCTCTCCTTAGCAGATAATAAACTGAATGGATCAATTCCCAAATCACTTGGTCAAATGGTAAGCTTGATCTCTTTGGACTTGTCCCAGAATATGTTAACTGGTGTTATTCCAAAATCCTTAGAATCACTTGTGTATCTTCAAAACATCAACTTCTCATATAATAGGTTACAAGGAGAGATTCCTGATGGTGGACATTTCAAAAATTTCACAGCTCAATCATTTATGCATAATGAAGCACTTTGCGGCAATCCTCGCCTCCAAGTACCTCTGTGTGGTAAGCAAGTTAAGAAATGGTCAATGGAAAAAAAACTTATATTGAAATGCATACTTCCCATAGTTGTGTCGGCCATTTTGGTTGTGGCTTGCATCATAGTTTTAAAACATAATAAAAGGAGAAAGAATGAAAATACTCTTGAAAGGGGTTTGTCAACTTTGGGAGCTCGAAGAATATCATATTATGAACTAGTGCAAGCAACAGATGGATTCAATGAGAGCAAATTACTTGGAATTGGGGGATTTGGCTCTGTTTATCAGGGGAAGCTTCTTGATGGTGAGATGATTGCCGTTAAAGTAATTGATTTGCAATCAGAGGCAAAATCAAAGAGCTTTGATGCAGAATGCAATGCAATGAGAAATCTACGACATAGAAATCTGGTAAAGATTATCAGTACTTGCTCAAGTCTTGATTTCAAATCTTTGGTGATGGAGTTCATGTCAAATGGAAGTGTAGACAAATGGTTATATTCAAAAAACTATTGTCTAAATTTCTTACAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGGAATATCTTCATCATGGTTCTTCAATACCAGTGGTTCATTGTGATTTAAAGCCTTCCAATGTCTTGTTGGATGAAAATATGGTTGCACATGTTAGCGATTTTGGTATTGCCAAGCTCATCGATGAAGGACAATCTCAAACTCATACACAAACTTTAGCTACTATTGGATACCTTGCACCAGAGTATGGATCTAAAGGAATTGTTTCTGTCAAAGGAGATGTGTACAGCTATGGGATTATGCTAATGGAAATCTTCACAAGAAGAAAGCCAACAGATGATATGTTTGTTGCAGAACTAAGCTTGAAGACATGGATCAGTGGATCATTGCCTAATTCAATTATGGAGGTCATGGATTCAAATTTAGTCCAAATAACTGGGGACCAAATTGATGATATATCGACTCACATGTCATCTATTTTTAGTTTAGCCTTGAGTTGTTGTGAAGATTCACCTGAAGCAAGAACCAATATGGCAGATGTTATCGCGTCGCTAATCAAAATCAAGGCTTTGGTTCTTGGCGCAAACAGGATCTAA 2364 0.3608 MDSETRSMWMGSIPEEIGYLDKLEKLFLGNNSLSGSIPSKIFNMSSLTYLAVEQNSLSGTIPSNTGYSLPNLQYLHLHQNNFVGNIPNNIFNSSKLRQIALEGNAFSGIVPNVIGNLRSLELFFIHGNNLRIEDSHQFFTSLTNCRYLKYLELSGNHIPNLPKSIGNLTSEVFLTDSCGIDGNIPLEVGNMTNLLRFNLSGNNITGTIPGTFKELQKLQYLSLSYNGLQGSFIEEFCEMKSLGELYLNNNKLSGVLPTCLGNMTSIIRLYIRSNSLYSKIPSSLWSLRDILEIDLSSNAFIGNLPPEIGNLRAIILLDLSRNQISSNIPTTINSILTLQNLSLADNKLNGSIPKSLGQMVSLISLDLSQNMLTGVIPKSLESLVYLQNINFSYNRLQGEIPDGGHFKNFTAQSFMHNEALCGNPRLQVPLCGKQVKKWSMEKKLILKCILPIVVSAILVVACIIVLKHNKRRKNENTLERGLSTLGARRISYYELVQATDGFNESKLLGIGGFGSVYQGKLLDGEMIAVKVIDLQSEAKSKSFDAECNAMRNLRHRNLVKIISTCSSLDFKSLVMEFMSNGSVDKWLYSKNYCLNFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDENMVAHVSDFGIAKLIDEGQSQTHTQTLATIGYLAPEYGSKGIVSVKGDVYSYGIMLMEIFTRRKPTDDMFVAELSLKTWISGSLPNSIMEVMDSNLVQITGDQIDDISTHMSSIFSLALSCCEDSPEARTNMADVIASLIKIKALVLGANRI 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02785 787 Pfam Protein kinase domain 503 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02785 787 SMART LRR_typ_2 69 93 IPR003591 -
Mepo1g02785 787 SMART LRR_typ_2 239 262 IPR003591 -
Mepo1g02785 787 SMART LRR_typ_2 359 382 IPR003591 -
Mepo1g02785 787 SMART LRR_typ_2 263 287 IPR003591 -
Mepo1g02785 787 SMART LRR_typ_2 20 44 IPR003591 -
Mepo1g02785 787 SMART LRR_typ_2 191 214 IPR003591 -
Mepo1g02785 787 SMART LRR_typ_2 311 335 IPR003591 -
Mepo1g02785 787 SMART LRR_typ_2 142 168 IPR003591 -
Mepo1g02785 787 SUPERFAMILY L domain-like 9 227 - -
Mepo1g02785 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Mepo1g02785 787 ProSiteProfiles Protein kinase domain profile. 502 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02785 787 Gene3D Ribonuclease Inhibitor 6 134 IPR032675 -
Mepo1g02785 787 Gene3D Ribonuclease Inhibitor 135 438 IPR032675 -
Mepo1g02785 787 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Mepo1g02785 787 SUPERFAMILY Protein kinase-like (PK-like) 479 774 IPR011009 -
Mepo1g02785 787 Gene3D Phosphorylase Kinase; domain 1 484 577 - -
Mepo1g02785 787 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 141 435 - -
Mepo1g02785 787 PANTHER OS04G0122200 PROTEIN 10 778 - -
Mepo1g02785 787 Gene3D Transferase(Phosphotransferase) domain 1 578 781 - -
Mepo1g02785 787 SUPERFAMILY L domain-like 177 424 - -
Mepo1g02785 787 SMART serkin_6 502 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02785 787 FunFam Serine-threonine protein kinase plant-type 483 577 - -
Mepo1g02785 787 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 578 786 - -
Mepo1g02785 787 ProSiteProfiles Leucine-rich repeat profile. 147 168 IPR001611 GO:0005515
Mepo1g02785 787 Pfam Leucine rich repeat 337 396 IPR001611 GO:0005515
Mepo1g02785 787 Pfam Leucine rich repeat 190 228 IPR001611 GO:0005515
Mepo1g02785 787 Pfam Leucine rich repeat 22 82 IPR001611 GO:0005515
Mepo1g02785 787 Pfam Leucine rich repeat 241 299 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02785 Mepo-Chr1 29572706 29575629 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02785 11 786 Receptor kinase-like Gene Family AT3G47570 37.701 2.74e-170 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo1g02785 Pkinase 3.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02785 - K13420 mtr:25481440 1137.09