LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo1g02750	ATGGAATCCCAGTGCCCTTCTGCCTTCCCCACCTCTTCCATCCACAAGCGCAAACACGTATCTGAGGATCACGCGCCTCCATTCCACCCTTCTTGCGACTCTTCGATTCACAACTTCACCGGTTCTGTGAACAGTTCAGCCGCTACTTCCGGTTCTGTCCCCGACTTTGTGGTTAAGGGAGAAGCCGCAACAAATATATTCACTGAAAAATTGCAGATAAGAGGTGGTTACAGTGCCAGGGAAGAGAGTCTTAAGAAAGAGGAAGAATCGGGATTACTCAAATTTGAATGCGTGTGCAATGATGGTGTTGATGACCATATGGTTTCGTTGATAGCATTGAAGAATATATTTGCCAGACAACTTCCCAATATGCCAAAGGAGTACATTGTCAGACTTGTTATGGATAGGAACCATAAGTCTATAATGGTTATAAGGGAGCCTAATCGCGTTGTTGGAGGCGTTACATATCGTCCATATGCAAGTCAGAGGTTCGCTGAGATAGCCTTTTGTGCAATTAGTGATGATGAACAAGTAAAAGGTTATGGTACCAGATTGATGAATCACTTGAAACAGTATGCACGTGATGTAGATGGACTGACACATTTTCTCACGTATGCTGATAATAATGCTATTGGCTATTTCATCAAACAAGGGTTTACAAAAGTGATTCACTTGGAGAAAGATCGATGGGAAGGGTACATAAAGGATTATGATGGGGGAACTCTCATGGAATGTAAGATTGATCCAAAGCTTCCTTATACTGATTTATCAACTATGATCCGTCGACAAAGACATGCACTATATGAAAAGATTAGAGAACTATCAAACTGTCACAATATTGTTTATGCTGGAATTGATTCTCAGAAGAGATCAGAAGCTGGAGGTATTCCTATTCCTAATAGAATTGTTGATGACATCCCTGGTTTGAAAGAGGCTGGATGGACCCCTGATATGTACGGTCATTCGCGGTTTAGAGCTTTAGATGGTTCTAATACTGACCATGCTACAAACCTAAAACATTTAACTGAGTTTATGCGTTCACTTCTAAAGGAAATGCATGATCACCCTGATGCTTGGCCATTCAAGGAGCCTGTTGATGCACAGAATGTGCCCGGTTATTATGAAATCATAAAAAATCCAATGGATCTAAAGACAATGAGCGAGAGGCTGGAGTCGGAACAATATTACGTCACATTGGAGATGTTTCTCGCGGATGCCAGAAGAATGTTTGAGAATGCACGTACCTATAATCCTCCAAAAACCATATATTACAAATGTGCTACAAGACTAGAAGCACACTTTCAAAGCAAAGTGACAACACTCCTCCAGTCTGGCTTCAAAATTCAGTAG	1350	0.4141	MESQCPSAFPTSSIHKRKHVSEDHAPPFHPSCDSSIHNFTGSVNSSAATSGSVPDFVVKGEAATNIFTEKLQIRGGYSAREESLKKEEESGLLKFECVCNDGVDDHMVSLIALKNIFARQLPNMPKEYIVRLVMDRNHKSIMVIREPNRVVGGVTYRPYASQRFAEIAFCAISDDEQVKGYGTRLMNHLKQYARDVDGLTHFLTYADNNAIGYFIKQGFTKVIHLEKDRWEGYIKDYDGGTLMECKIDPKLPYTDLSTMIRRQRHALYEKIRELSNCHNIVYAGIDSQKRSEAGGIPIPNRIVDDIPGLKEAGWTPDMYGHSRFRALDGSNTDHATNLKHLTEFMRSLLKEMHDHPDAWPFKEPVDAQNVPGYYEIIKNPMDLKTMSERLESEQYYVTLEMFLADARRMFENARTYNPPKTIYYKCATRLEAHFQSKVTTLLQSGFKIQ	449

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo1g02750	449	ProSiteProfiles	Gcn5-related N-acetyltransferase (GNAT) domain profile.	100	248	IPR000182	GO:0016747
	Mepo1g02750	449	SUPERFAMILY	Bromodomain	335	442	IPR036427	GO:0005515
	Mepo1g02750	449	Gene3D	-	330	447	IPR036427	GO:0005515
	Mepo1g02750	449	MobiDBLite	consensus disorder prediction	1	27	-	-
	Mepo1g02750	449	SUPERFAMILY	Acyl-CoA N-acyltransferases (Nat)	115	253	IPR016181	-
	Mepo1g02750	449	CDD	Bromo_gcn5_like	341	441	-	-
	Mepo1g02750	449	ProSiteProfiles	Bromodomain profile.	353	424	IPR001487	GO:0005515
	Mepo1g02750	449	SMART	bromo_6	334	443	IPR001487	GO:0005515
	Mepo1g02750	449	FunFam	Histone acetyltransferase KAT2A	90	255	-	-
	Mepo1g02750	449	ProSitePatterns	Bromodomain signature.	358	416	IPR018359	-
	Mepo1g02750	449	Gene3D	-	89	254	-	-
	Mepo1g02750	449	CDD	NAT_SF	143	195	-	-
	Mepo1g02750	449	Pfam	Acetyltransferase (GNAT) family	137	219	IPR000182	GO:0016747
	Mepo1g02750	449	PRINTS	Bromodomain signature	405	424	IPR001487	GO:0005515
	Mepo1g02750	449	PRINTS	Bromodomain signature	356	369	IPR001487	GO:0005515
	Mepo1g02750	449	PRINTS	Bromodomain signature	370	386	IPR001487	GO:0005515
	Mepo1g02750	449	Pfam	Bromodomain	346	428	IPR001487	GO:0005515
	Mepo1g02750	449	PANTHER	GH11602P	38	443	IPR037800	GO:0004402

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo1g02750	Mepo-Chr1	29069215	29070564	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	GNAT	Mepo1g02750		Bromodomain	3.4e-23	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo1g02750	K06062		-	gmx:100791610	632.098