Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02745 ATGAGTACCAGTCAAGGTGGTAAGAAACTAACCGAAGATGATGCCTTTGCATATCTTAAGGCAGTCAAGGATGTCTTTAGAGATAAAATGGAAAACTATTCTTACTTTTTGAAAATAATGAAAGATTTCAAAGATCAAAGGATTAATTACCATGATGTTGTAACGGAGGTGAAGGAGTTGTTTAAAGGACATAATGATCTGATTACGGGATTTAACATCTTTGCACCAAGTGGTTATCAAATCCCAATTTCACAAGAAGAGGAACAACTCCCTAGGATTCTTGATGAATGTGAAATGACAATTCCATTGGAAGAAATAAAACCTCTTAATGCACAATCTCCTCAGATGATGCTTGGTGGAGAGCATATCACAACTCCATCAAGGAATGAACCATTTGGTGGACCTGAACACGCTAATGAGTTTGTCAAGAAAGTGAAGATAATGCGTAAAAGGGACGTCACCATCTTTACCTTGAATCAACATGTGCTAAGTAGTTTTAAGGGTGAGATGGATGAAGATAACATGAGGTTCATTCAGAGGATTCTTGTGACGAAGAAGACTCGGTATGAAGGTGATCGTCATGTTTTCAAGTCATTTCTTTACATCATGAACATGCTGATAGATCGGAAAAAGACTTACATCGAGACTTACTATGAGGCTTCTGCACTTTTGGAAGGTCACACAGATCTTCAAGATGAGTTAATTATGTTTTTTCCTGGTGTTTAA 726 0.3719 MSTSQGGKKLTEDDAFAYLKAVKDVFRDKMENYSYFLKIMKDFKDQRINYHDVVTEVKELFKGHNDLITGFNIFAPSGYQIPISQEEEQLPRILDECEMTIPLEEIKPLNAQSPQMMLGGEHITTPSRNEPFGGPEHANEFVKKVKIMRKRDVTIFTLNQHVLSSFKGEMDEDNMRFIQRILVTKKTRYEGDRHVFKSFLYIMNMLIDRKKTYIETYYEASALLEGHTDLQDELIMFFPGV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02745 241 FunFam Paired amphipathic helix protein Sin3 14 76 - -
Mepo1g02745 241 Gene3D Paired amphipathic helix 173 239 IPR036600 GO:0006355
Mepo1g02745 241 Gene3D Paired amphipathic helix 14 76 IPR036600 GO:0006355
Mepo1g02745 241 PANTHER SIN3B-RELATED 10 239 IPR039774 GO:0003714
Mepo1g02745 241 SUPERFAMILY PAH2 domain 173 239 IPR036600 GO:0006355
Mepo1g02745 241 SUPERFAMILY PAH2 domain 8 76 IPR036600 GO:0006355
Mepo1g02745 241 ProSiteProfiles PAH domain profile. 8 78 IPR003822 GO:0006355
Mepo1g02745 241 ProSiteProfiles PAH domain profile. 166 241 IPR003822 GO:0006355
Mepo1g02745 241 Pfam Paired amphipathic helix repeat 31 74 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02745 Mepo-Chr1 29015598 29021697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02745 10 88 WRKY Transcription Factor Family AT4G12020 45.570 3.19e-15 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo1g02745 PAH 1.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02745 K11644 - tpra:123896139 239.965