Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02726 ATGAAGAGGTCAAGAGATGATGGTTACATGAGTTCACAACTCAAACGCCCTGTGCTGTCTTCAAGAGGAGAACCTTCGGGGCAAGCCCAAGTGATGACTGGTGGTCAGAAGTTAACCACAAATGATGCCTTATCATATCTTAAGGCAGTAAGAGAAATGTTTCAAAACGACAAGGAAAAGTACGATGAATTTTTGGAAGTCATGAAGGATTTCAAAGCCCAAAGAATTGATACAGCTGGTGTCATAGAAAGAGTGAAGGAGCTGTTTAAAGGGCATAAAGATTTGATTTTGGGATTTAACACCTTTTTGCCAAAGGGATATGCAATCACACTTCCATCGGAAGATGAACAGCCTCTACAAAAGAAGCCTGTTGAATTTGAAGAAGCTATAAATTTTGTGGGCAAGATTAAGAATCGTTTTCAAGGCAACGATCGCGTGTATAAGACTTTTTTAGACATACTAAATATGTATAGAAAGGAACTCAAGCCTATCACCGCAGTTTACCAAGAGGTTTCTGCTCTCTTCCAAGACCATGGAGATCTTCTCGAGGAGTTTACTCATTTTCTTCCTGATACTTCAGGAGCAGCCGCTGCACATTTTGCTTCTGCTCGTAATCCTCTGCTTCGAGATAGGAGCTCTGCAATGACAACAGGGAGGCAAATGCATGTTGACAAGAGAGAAAAGACAACAACTTTGCATGCTGACCGCGATCTCAGCGTTGATCATCCTGATCCAGAACTTGACAGAGGTGTGATGAGGACTGATAAGGAGCAGAGAAGACGCGAGAGAGAAAAGGACCGTAGAGAAGAAAGAGACAGGAGAGAACGGGAAAGGGATGATAGAGATTATGATAATGATGGTAATCTGGAGCGTTTATCCCACAAGAAAAAATCTGGTCATAGAGCTATGGACCCTGGTACTGAACCATTGCATGATGCAGATGAAAAGCTTGACCTTCTCCCTATCCCGTCCGCTTGTGAGGATAAAAGTTCTTTGAAAAGTTTGTGCAGTCCGGTGCTTGCTTTCCTTGAAAAAGTCAAGGAGAAGTTAAAAAATCCTGATGATTACCAGGAATTTTTGAAGTGCCTGCATATCTACAGCAGGGAAATAATCACCCGACAAGAACTACTGGCATTGGTGGGTGATTTACTGGGAAAATATGCCGATATTATGGAGGGATTTGATGATTTTGTGACACAATGTGAGAAGAATGAAGGATTCCTTGCTGGTGTCATGAATAAAAAATCTTTGTGGAATGAAGGACATGGGCAGAAACCCCTGAAGGTAGAGGAGAAGGACAGAGATTGGGACAGGGATGATGGGGTGAAAGAAAGGGACCGTGAACTCCGAGAAAGAGACAAATCCACTGGAATTTCCAACAAGGATGTTTCTATTCCTAAGGTGTCTCTAAGCAAGGACAAGTATGTAGGAAAGCCTATAAATGAACTGGACCTTTCCAACTGTGAACAATGTACTCCCAGCTACCGTCTTCTACCAAAAAATTACCCAATACCATTAGCTAGCCAGAAAACTGAACTTGGCGCCAAAGTATTGAATGATCACTGGGTTTCTGTAACGTCAGGAAGTGAGGATTATTCCTTTAAACACATGCGCAAAAATCAGTATGAAGAGAGCTTGTTTAGATGTGAAGACGACAGGTTTGAACTTGATATGTTGTTAGAGTCTATAAATGCAACAAGTAAGAAAGTTGAGGTGATCATAGAAAAAGATAATGATGATGTAATTCCAGGAGATATTCCAATTCGTATTGAGGACCATTTATCAGCTCTAAATCTTAGGTGCATTGAACGATTATATGGTGACCATGGGCTTGATGTGATGGAAGTGTTGAAAAAGAATGCATCTCTAGCCTTGCCGGTGATATTAACCCGCCTGAAGCAGAAACAGGAGGAGTGGGCAAAATGCCGTGCAGAGTTTAATAAAGTTTGGGCTGATGTATATGCGAAGAATTATCACAAATCACTTGATCATCGAAGCTTTTACTTTAAGCAGCAGGATACAAAAAGCTTGAGCACTAAAGCTTTATTGGGAGAGATCAAAGAAATTAGCGAGAAGAAACGAAAAGAAGATGTTGTTCTTCTTGCAATTGCTGCTGGGAATAGACGGCCTATTCTTCCTAACTTGGAATTTGAGTATCCTGATCCAGAGATTCAGGAAGATTTGTACCAACTCGTAAAATATTCATGTGGAGAAGTTTGTACAACCGAACAATTGGATAAAGTGATGAAGATTTGGACAACATTTTTAGAACCAATGCTTGGTGTTCCTTCTCGACTGCGTGTTCCCGAAGACACAGAAGATGCTGTCAAGGCCCAGAAAGATTCTGCAAAAACTGGTACAGCAAGTATTGCCAAGCGTGATAGTAGTCCTGGTGTTGGTGCTACCATAATGAATCTTAAGAGTTCAAACCCTAATAGAAATGGAGATGCTAGTGTTCCATTTGAACAATCAAATTCTTGCAAAGAATGGCAAGCAAGTGGGGTTGGTGGGGTTAAAGAGGATGATTGTCTCAAATCAGACCGTTCTGCGCTTAAGACTGATACTTTGGGAAGTAGTACCCTGCAGGGTAATGTTCATATAAGTGCATCCGTTCCTGACAAAGTATCAAGAGTCAATTATCAAGATCATTCCATTGAACAGTTGTTGAATGCTAATGTCTCAATGTCCTTTGGAATGGAGCAAAGTAATGGAAGAGCAAACATGAATAGTGCATCAGGATTTGCTGCAACTCCGTCTAGACCTGGTTATATTTCTAGTGAGGGAGGGCTTGATTTACCTTTATCAGAGGTTGCTGATTCTACAAGACCAGATATGTCCACAAATGGGGCTATCACTGAAGACACCAAAGCTCACAGCTGTCACAAAGAATCAGTTGGACACTTCAAATGTGAAAGAGAAGAGGGTGAATTATCTCCGAATGGAGATTTTGAAGAGGATAACTTTGCAGTTTATGTAAATGCTGGTCTGGAGGCAGTGCATAAAGGAAAAGATTGTAATACCAGTCAACACTACCAAAATAGACGTGAGGAACAAATTTGTGGGGTAGCTGGAGGTGAAAATGACGATGAAAGTGACGGAAGTCCTCATAGATCATCAGACGACAGTGAAAATGCATCTGAGAATGGTGATGTTTCTGGTACCGAGTCTGCTGATGGTGAGGAATGTTCTCGAGAAGAACATGAAGAGGATGGGGATCATGATAACAAGGTCGAGAGTGAAGGTGAAGCTGAAGGAATGGCTGATGCCAATGATGTTGAAGGAGATGGAGCCTCACTGCCATACTCAGAGCGCTTTCTTCTTACTGTAAAGCCTCTCGTAAAATATGTCAGCCCGGTGTTTCATGGGAAAGAAGATAATGTTCAAATTTTTTATGGAAATGATTCCTTTTATGTGCTGTTTAGACTTCATCAGACATTGTATGAGAGGATACGATCGGCAAAGATTAACTCATCTTCTGCTGAAAAGAAATGGAGAGCTTCAAATGATACAAGTTCCACTGATCGATATGCCAGGTTCATGAATTCTCTTTACAGTTTACTGGATGGTTCTTCTGATAATTCAAAATTTGAAGATGACTGTCGAGCTATTATTGGAACTCAGTCATATGTCTTGTTCACGTTAGACAAGCTGATATATAAACTTGTTAAGCAGCTTCAAGCTGTTGCCAGTGGCACTGATGAGATGGATAACAAACTTCTTCAACTATATGCATATGAACAATCAAGAAAATCTGAAAGCTTTTTTGATATAGTTTATCATGAAAATGCCCGTGTTCTTCTTCATGATGAGAACATATATCGTATTGAATGTTCACCTACCCGATTATCTATTCAGTTGATGGACTATGGACATGATAAGCCGGAAGTGACTGCTGTGTCAATAGATCCTAATTTTTCAACCTATTTGCACGATAACTTCCTATCTGTTGTCCCTGACAGTAAGGAGAAGTCAGGAATTTTCTTAAAAAGGAATAAACTAAAATGTGCCAGGAGTGATGAGTTTTCTAGCCAGGTTATGGATGGAGTACAAGTTATCAATGGTTTGGAGTGTAAAATTGCTTGCAATTCATCCAAGGTTTCATATGTTTTAGATACCGAAGACTCTTTAATTCGAACGAAAAGGAAAAGGGGATGTTTGCATCAGAACAATTCATATCCTGAACAGACAATGCCTTCAAACACTTGTTCAAGCAGAGTACAGCGGTTCTACAAATTATTTTCCATCAAATGA 4251 0.4041 MKRSRDDGYMSSQLKRPVLSSRGEPSGQAQVMTGGQKLTTNDALSYLKAVREMFQNDKEKYDEFLEVMKDFKAQRIDTAGVIERVKELFKGHKDLILGFNTFLPKGYAITLPSEDEQPLQKKPVEFEEAINFVGKIKNRFQGNDRVYKTFLDILNMYRKELKPITAVYQEVSALFQDHGDLLEEFTHFLPDTSGAAAAHFASARNPLLRDRSSAMTTGRQMHVDKREKTTTLHADRDLSVDHPDPELDRGVMRTDKEQRRREREKDRREERDRRERERDDRDYDNDGNLERLSHKKKSGHRAMDPGTEPLHDADEKLDLLPIPSACEDKSSLKSLCSPVLAFLEKVKEKLKNPDDYQEFLKCLHIYSREIITRQELLALVGDLLGKYADIMEGFDDFVTQCEKNEGFLAGVMNKKSLWNEGHGQKPLKVEEKDRDWDRDDGVKERDRELRERDKSTGISNKDVSIPKVSLSKDKYVGKPINELDLSNCEQCTPSYRLLPKNYPIPLASQKTELGAKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESINATSKKVEVIIEKDNDDVIPGDIPIRIEDHLSALNLRCIERLYGDHGLDVMEVLKKNASLALPVILTRLKQKQEEWAKCRAEFNKVWADVYAKNYHKSLDHRSFYFKQQDTKSLSTKALLGEIKEISEKKRKEDVVLLAIAAGNRRPILPNLEFEYPDPEIQEDLYQLVKYSCGEVCTTEQLDKVMKIWTTFLEPMLGVPSRLRVPEDTEDAVKAQKDSAKTGTASIAKRDSSPGVGATIMNLKSSNPNRNGDASVPFEQSNSCKEWQASGVGGVKEDDCLKSDRSALKTDTLGSSTLQGNVHISASVPDKVSRVNYQDHSIEQLLNANVSMSFGMEQSNGRANMNSASGFAATPSRPGYISSEGGLDLPLSEVADSTRPDMSTNGAITEDTKAHSCHKESVGHFKCEREEGELSPNGDFEEDNFAVYVNAGLEAVHKGKDCNTSQHYQNRREEQICGVAGGENDDESDGSPHRSSDDSENASENGDVSGTESADGEECSREEHEEDGDHDNKVESEGEAEGMADANDVEGDGASLPYSERFLLTVKPLVKYVSPVFHGKEDNVQIFYGNDSFYVLFRLHQTLYERIRSAKINSSSAEKKWRASNDTSSTDRYARFMNSLYSLLDGSSDNSKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQLQAVASGTDEMDNKLLQLYAYEQSRKSESFFDIVYHENARVLLHDENIYRIECSPTRLSIQLMDYGHDKPEVTAVSIDPNFSTYLHDNFLSVVPDSKEKSGIFLKRNKLKCARSDEFSSQVMDGVQVINGLECKIACNSSKVSYVLDTEDSLIRTKRKRGCLHQNNSYPEQTMPSNTCSSRVQRFYKLFSIK 1416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02726 1416 ProSiteProfiles PAH domain profile. 122 192 IPR003822 GO:0006355
Mepo1g02726 1416 MobiDBLite consensus disorder prediction 424 458 - -
Mepo1g02726 1416 Gene3D Paired amphipathic helix 42 104 IPR036600 GO:0006355
Mepo1g02726 1416 MobiDBLite consensus disorder prediction 422 460 - -
Mepo1g02726 1416 Gene3D Paired amphipathic helix 120 193 IPR036600 GO:0006355
Mepo1g02726 1416 FunFam Paired amphipathic helix protein SIN3 330 403 - -
Mepo1g02726 1416 MobiDBLite consensus disorder prediction 1023 1095 - -
Mepo1g02726 1416 SMART hdac_interact2seq4b 487 587 IPR013194 -
Mepo1g02726 1416 MobiDBLite consensus disorder prediction 1057 1083 - -
Mepo1g02726 1416 MobiDBLite consensus disorder prediction 940 954 - -
Mepo1g02726 1416 MobiDBLite consensus disorder prediction 211 313 - -
Mepo1g02726 1416 SUPERFAMILY PAH2 domain 119 191 IPR036600 GO:0006355
Mepo1g02726 1416 Pfam C-terminal domain of Sin3a protein 1130 1376 IPR031693 -
Mepo1g02726 1416 PANTHER SIN3B-RELATED 37 1276 IPR039774 GO:0003714
Mepo1g02726 1416 SUPERFAMILY PAH2 domain 36 105 IPR036600 GO:0006355
Mepo1g02726 1416 ProSiteProfiles PAH domain profile. 328 401 IPR003822 GO:0006355
Mepo1g02726 1416 MobiDBLite consensus disorder prediction 778 800 - -
Mepo1g02726 1416 ProSiteProfiles PAH domain profile. 36 106 IPR003822 GO:0006355
Mepo1g02726 1416 FunFam Paired amphipathic helix SIN3-like protein 121 192 - -
Mepo1g02726 1416 Gene3D Paired amphipathic helix 332 403 IPR036600 GO:0006355
Mepo1g02726 1416 MobiDBLite consensus disorder prediction 14 35 - -
Mepo1g02726 1416 Pfam Sin3 family co-repressor 489 576 IPR013194 -
Mepo1g02726 1416 SUPERFAMILY PAH2 domain 339 401 IPR036600 GO:0006355
Mepo1g02726 1416 MobiDBLite consensus disorder prediction 220 313 - -
Mepo1g02726 1416 MobiDBLite consensus disorder prediction 1029 1044 - -
Mepo1g02726 1416 MobiDBLite consensus disorder prediction 939 958 - -
Mepo1g02726 1416 FunFam Paired amphipathic helix protein Sin3 42 104 - -
Mepo1g02726 1416 MobiDBLite consensus disorder prediction 1 35 - -
Mepo1g02726 1416 Pfam Paired amphipathic helix repeat 146 189 IPR003822 GO:0006355
Mepo1g02726 1416 Pfam Paired amphipathic helix repeat 354 397 IPR003822 GO:0006355
Mepo1g02726 1416 Pfam Paired amphipathic helix repeat 59 103 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02726 Mepo-Chr1 28784251 28804471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02726 38 119 WRKY Transcription Factor Family AT4G12020 60.976 1.60e-22 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo1g02726 Sin3a_C 1.2e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02726 K11644 - gmx:100781798 2013.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02726 1 28784251 28804471 Mepo1g02726 1 28784251 28804471 ECH
Mepo5g01699 5 18195541 18208957 Mepo1g02726 1 28784251 28804471 PCT