Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02724 ATGATAAAACCCAAAACCCTATATTTCATTTCACCATTTCTGTCTTGTTTGCAAAGACATCAAAAAATGAATGCTACTCGTTCTGCTCTGAAGCTCCATCTTCAAAATTCACCCATTCGCTACCATCAATTTTTCTTCTTCTCTCGATTCAACAATGCTCTTATTCGCAATCCCACTTTCTCTTCTTCTTCTTCTCTCTTCAATTTCAATGCAACGCGTTTCTTTTCTGTAACCCTTCCATGTCAAACACAGACACAACCCTTTGTTGGAAGCGCCGTTTCATCAGAAGATTTCAATGGAAGAGACACTTTCTTTGCTGAGGATAACGTTTCGTGGAGTTCACTTGGTCTTTCTCATACCCTTTCTCGAGCTCTCTCTAATATTGCTCTCAATACACCCTCTCTCGTACAGGCTTCTTCTATACCATCTGTGTTGTCAGGGAAGGATGTAGTTATTGCTGCAGAGACCGGCAGTGGTAAGACATACAGTTATCTACTTCCTCTCATTGATAAGCTGAGGGGTACAGAGGAACATTCTCTGGATGTTGTATCTGATAAAGAAGTCTCTCCGCCTGTCAGGAGAGTTCTGCTCGTGCTTTGTCCGAATGTGCAATTGTGTGAGCAGGTAGTTAGGATGGCTAATAGTCTTCGTGGAGACAATGATGAAACCATTGTTAGTGCTGCAGCCATTTGTGGGAAACAGGGATGGCCAATTCGGGAACCTGATATCATTGTGACAACACCTGCTGCTCTTCTCAATCATGTTGACGTTGATAGAAGACGCCGCATGGAATTTATGCATGGTGTTAAATATGTGGTGTTTGATGAAGCTGATATGCTTCTCTGCGGGAGCTTCCAGAATAAAGTAATCCGCCTGATTAACTTGCTCCGCTATGATGAAAAACTCTTGTCTCGATCGAAAACATCAGTATCAGAGTTGCCAATGACATCGGAATCTTCTTTGTCGTCGCATGATGCTTCAGAAGGTGAAGAGGAATTTCCAACTGAAGCCATGTCAGACGAGGAGGATGATGATAACGAGGACATTGCCAATAGTAATAACGAAGCTGAATCTGTCAAGAAAACAAGAAGAGATTGGAGAAGAGTGAGGAAACATTTTGAGCGTAGTAAACAATATGTTTTTGTTGCAGCCACACTTCCAGTGAATGGAAAGAAAACAGCGGGAGCATTATTGAAACACATGTTTCCTGATGCTGAGTGGGTTAGTGGAAACTATCTTCATTGTCACAATCCAAGATTGAAGCAAAGATGGATAGAAGTGACCGTTGATACACAAGTGAAAGAGCTCATAAGGGCTGTGAATCACAGTTTAAAATCGGAAGATTTGGATAATGGTGGTGGCATTCATAGAACAATGGTGTTTGCCAACACAGTTGAGGCTGTTGAAGCTGTGGTGAAGATATTGGGCTATGCTGGGCTTGAATGTTTACGTTATCATAAGAATTGCACGTTGGATGAGCGGGCACAAACTTTAGTTGATTTCTACGACAAAGGTGGTGTTCTTGTATGTACTGATGCAGCTGCTCGTGGCGTGGATATTCCAAATGTCTCTCATGTTATTCAGGCAGATTTTGCTACTTCTGCTGTAGACTTTTTGCATAGGATTGGTCGTACAGCTAGAGCTGGCCAAATCGGACTAGTTACCAGCATGTATACCGAATCCAACAGAGAGCTTGTAGATGCTGTTCGTCGTGCAGGGGAACTCGGTCTACCTGTGGAGACCGCATTTAGCAGGAAAAGAAGCTTCCGTAACAAGATAAAAAAGAAAGCAAGTGCTAACAAAGTCAGAGATTCAGCAACCATTGAAGAGAGTCTTACAGCGTGA 1845 0.4255 MIKPKTLYFISPFLSCLQRHQKMNATRSALKLHLQNSPIRYHQFFFFSRFNNALIRNPTFSSSSSLFNFNATRFFSVTLPCQTQTQPFVGSAVSSEDFNGRDTFFAEDNVSWSSLGLSHTLSRALSNIALNTPSLVQASSIPSVLSGKDVVIAAETGSGKTYSYLLPLIDKLRGTEEHSLDVVSDKEVSPPVRRVLLVLCPNVQLCEQVVRMANSLRGDNDETIVSAAAICGKQGWPIREPDIIVTTPAALLNHVDVDRRRRMEFMHGVKYVVFDEADMLLCGSFQNKVIRLINLLRYDEKLLSRSKTSVSELPMTSESSLSSHDASEGEEEFPTEAMSDEEDDDNEDIANSNNEAESVKKTRRDWRRVRKHFERSKQYVFVAATLPVNGKKTAGALLKHMFPDAEWVSGNYLHCHNPRLKQRWIEVTVDTQVKELIRAVNHSLKSEDLDNGGGIHRTMVFANTVEAVEAVVKILGYAGLECLRYHKNCTLDERAQTLVDFYDKGGVLVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRTARAGQIGLVTSMYTESNRELVDAVRRAGELGLPVETAFSRKRSFRNKIKKKASANKVRDSATIEESLTA 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02724 614 SMART ultradead3 129 423 IPR014001 -
Mepo1g02724 614 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 432 597 IPR001650 -
Mepo1g02724 614 MobiDBLite consensus disorder prediction 332 351 - -
Mepo1g02724 614 Gene3D - 421 614 IPR027417 -
Mepo1g02724 614 Gene3D - 92 402 IPR027417 -
Mepo1g02724 614 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 561 IPR027417 -
Mepo1g02724 614 Pfam DEAD/DEAH box helicase 136 299 IPR011545 GO:0003676|GO:0005524
Mepo1g02724 614 CDD SF2_C_DEAD 420 558 - -
Mepo1g02724 614 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 141 404 IPR014001 -
Mepo1g02724 614 Pfam Helicase conserved C-terminal domain 456 549 IPR001650 -
Mepo1g02724 614 MobiDBLite consensus disorder prediction 313 361 - -
Mepo1g02724 614 SMART helicmild6 469 549 IPR001650 -
Mepo1g02724 614 CDD DEADc 121 303 - -
Mepo1g02724 614 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 120 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02724 Mepo-Chr1 28758521 28765938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02724 363 577 Eukaryotic Initiation Factors Gene Family AT5G11200 27.236 1.17e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02724 - - gmx:100780518 853.588