Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02698 ATGAATGACGAGCAATTACCGGCGATTCTCATGCCACTGTTCAGCACCTCCGACTGTGACCTCCACTGCGGCGAGGACTCATCAGAGGTCATCACCGGTGATTCACCGGAATACTCTTCCGACCTAGATTCATTATCATCGTCGTTGCCGTTGTCGTCATTATTAACTGAGGAAGAGGAGGAGTCGATTACTGTTTTCATTGAGGACGAGCATAAGTTTGTTCCTGGTTTGGACTACGTCTCAAGATTCCAATCTCGCTCTCTCGAAGCCAGCACCAGAGAAGAAGCCATTGCATGGATTCTCAAGGTACATGAGTATTATGGATTTCAGCCGTTAACGGCGTACCTCTCCATTAACTATATGGATCGGTTTTTGGATTCTCGACCTTTACCGGAATCAAATGGGTGGCCACTGCAACTTTTATCTGTTGCATGTTTGTCTTTAGCAGCAAAGATGGAGGAACCCCTTGTTCCTTCTCTCTTGGACTTTCAGGTTGAAGGTGCCAAATACATATTTCAACCGAGGACAATTCTTAGAATGGAGCTGCTTGTTCTGACTATTTTGGATTGGAGGCTAAGATCAGTCACCCCACTTAGTTTCCTCAGTTTCTTTGCGAGCAAGCTAGATTCAACTGGAACTTTCACTCACTTCCTAATTTCACGTGCTACAGAAATTATCTTATCTAATATCCAAGATGCTAGCTTTCTTGCTTACAGGCCATCATGCATTGCTGCAGCTGCCATACTCTCTGCAGCTAATGAAATTCCTAATTGGTCTTTTGTTAATCCTGAGCTTGCTGAGTCATGGTGTGAAGGACTAAGCAAAGAAAAAATTATAGGGTGCTATGAGTTGATTCAAGAAATTGTGAGTAGCAATAACCAAAGAAATGCCCCTAAAGTGTTGCCACAGTTGCGAGTTACAGCTCGGACCAGAAGGTGGTCTAGTATCTCTTCGTCATCGTCATCATCTCCATCTTCCTCCTCTTCACCTTCTTTCTCGTTGTCTTATAAAAAGAGGAAATTAAATAGCTGTTTCTGGGTAGATGATGACAAAGGAAACTCAGAGTGA 1068 0.4354 MNDEQLPAILMPLFSTSDCDLHCGEDSSEVITGDSPEYSSDLDSLSSSLPLSSLLTEEEEESITVFIEDEHKFVPGLDYVSRFQSRSLEASTREEAIAWILKVHEYYGFQPLTAYLSINYMDRFLDSRPLPESNGWPLQLLSVACLSLAAKMEEPLVPSLLDFQVEGAKYIFQPRTILRMELLVLTILDWRLRSVTPLSFLSFFASKLDSTGTFTHFLISRATEIILSNIQDASFLAYRPSCIAAAAILSAANEIPNWSFVNPELAESWCEGLSKEKIIGCYELIQEIVSSNNQRNAPKVLPQLRVTARTRRWSSISSSSSSSPSSSSSPSFSLSYKKRKLNSCFWVDDDKGNSE 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02698 355 ProSitePatterns Cyclins signature. 93 124 IPR006671 -
Mepo1g02698 355 Pfam Cyclin, N-terminal domain 62 192 IPR006671 -
Mepo1g02698 355 SUPERFAMILY Cyclin-like 56 192 IPR036915 -
Mepo1g02698 355 CDD CYCLIN_AtCycD-like_rpt2 195 285 - -
Mepo1g02698 355 MobiDBLite consensus disorder prediction 315 336 - -
Mepo1g02698 355 FunFam D2/4-type cyclin 76 193 - -
Mepo1g02698 355 Gene3D - 67 281 - -
Mepo1g02698 355 SMART cyclin_7 98 186 IPR013763 -
Mepo1g02698 355 SUPERFAMILY Cyclin-like 196 295 IPR036915 -
Mepo1g02698 355 Pfam Cyclin, C-terminal domain 195 305 IPR004367 -
Mepo1g02698 355 SMART Cyclin_C_2 195 326 IPR004367 -
Mepo1g02698 355 PANTHER CYCLINS 56 291 IPR039361 -
Mepo1g02698 355 CDD CYCLIN_AtCycD-like_rpt1 93 190 - -
Mepo1g02698 355 Gene3D - 76 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02698 Mepo-Chr1 28550171 28554543 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02698 16 354 Core Cell Cycle Gene Families AT1G70210 58.309 7.22e-128 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02698 K18810 - gmx:100778578 470.7